prot_C-linearis_contig8.15449.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15449.1
Unique Nameprot_C-linearis_contig8.15449.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length417
Homology
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BLAST of mRNA_C-linearis_contig8.15449.1 vs. uniprot
Match: A0A6H5LCY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCY2_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 5.250e-150
Identity = 240/384 (62.50%), Postives = 300/384 (78.12%), Query Frame = 0 
Query:   26 AAEATEADAVGMTKLLATFFVGEIQVAITDLDLTNIGRTQRQAGVDALIAQIKSDGFDERYAPVVCLLHRLPANQTLEMLLAAGGIRFRVIDGNHRVAALIQLADESPAATATKLIPVRVYQPMTPATERMVAAGCNRISSNVVKTLLVDEIVWYRNVIRALQEQNKGED-MSEDQVLRAVRNDFKNQNQKAPSTPTLKKYVSIALNIAPIALEALKDVSFLPGRAEKHPDRTQLNHKRVTLKLLERPEFQAMTHCQQEVYILRLAKGSITVNKQLNQDQCKVLDSTAQYVGDEISRVEMIAPRAMWSADFNIGIRKVMIAGLKSRYFVHEDGLQKSVESYQKTLLEGMEDSEPHIDLLLREPHNTSALLLKGDPVMKPRWEAF 408
            AAEA EA  VG++KLLA F++G  +V+I  L+LT+IGR QRQAG+ AL   I+SDGFDE YAP+VCL++ LP  Q+L  +LAAG I+ RVIDGNHRVAAL Q+ DE    T+ ++I VRV+QPM  ATERMVAAGCNRISSNVVKTLLVDE+VWYR+VI ALQEQ++G   M+ DQ+L+A++ DF NQ+QKAP+  TLKK++ IALNI P  LEAL+D+S+LPGR   HPD T L++KRVTLKL+ER +FQ M   QQE Y+ RLAKG+IT NKQLN +QCK LDSTA+ +  EI RVE I PRA WS  F  G+RKVMI GL+SRY+ H  GLQ +VE+Y+KTL E ME S+ HI++LLREPH  ++ LL+ DP MKP+WEA+
Sbjct:    4 AAEADEASTVGISKLLAKFYLGSHRVSIRGLELTSIGRAQRQAGIVALKKHIESDGFDESYAPIVCLVNPLPQEQSLGTVLAAGDIKLRVIDGNHRVAALQQI-DEETKPTSPRVISVRVHQPMPQATERMVAAGCNRISSNVVKTLLVDEVVWYRSVIHALQEQHQGSTAMTNDQILKAIKKDFANQSQKAPANQTLKKWIGIALNITPYGLEALRDLSYLPGREPNHPDLTSLDYKRVTLKLVERTKFQGMNKWQQEAYVYRLAKGAITTNKQLNDEQCKTLDSTAETIAQEIERVESIIPRAEWSEGFKRGMRKVMIGGLQSRYYGHLIGLQTNVEAYKKTLPEKMEVSKDHINMLLREPH--ASTLLQDDPEMKPKWEAY 384
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LCY2_9PHAE5.250e-15062.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:169823..172881 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15449.1mRNA_C-linearis_contig8.15449.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 169823..172882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15449.1 ID=prot_C-linearis_contig8.15449.1|Name=mRNA_C-linearis_contig8.15449.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=417bp
PPLHKHNYHPPHPPAIHTPFPLDKMAAEATEADAVGMTKLLATFFVGEIQ
VAITDLDLTNIGRTQRQAGVDALIAQIKSDGFDERYAPVVCLLHRLPANQ
TLEMLLAAGGIRFRVIDGNHRVAALIQLADESPAATATKLIPVRVYQPMT
PATERMVAAGCNRISSNVVKTLLVDEIVWYRNVIRALQEQNKGEDMSEDQ
VLRAVRNDFKNQNQKAPSTPTLKKYVSIALNIAPIALEALKDVSFLPGRA
EKHPDRTQLNHKRVTLKLLERPEFQAMTHCQQEVYILRLAKGSITVNKQL
NQDQCKVLDSTAQYVGDEISRVEMIAPRAMWSADFNIGIRKVMIAGLKSR
YFVHEDGLQKSVESYQKTLLEGMEDSEPHIDLLLREPHNTSALLLKGDPV
MKPRWEAFEEERKASKQ
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