mRNA_C-linearis_contig79.15440.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: A0A6H5JJ53_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJ53_9PHAE) HSP 1 Score: 1695 bits (4389), Expect = 0.000e+0 Identity = 1000/1246 (80.26%), Postives = 1067/1246 (85.63%), Query Frame = 1
Query: 70 PSNRTQTLYRNHNQHGSVGTALHAVDRVQTMSAAKSQKPGAAAAAVS----KVATTRTPARRRASDSGPVGTTRR--VSPTASGELVGTALALHDASGDGXXXXXAM----LARRTSTGQLQSLVSMGSNFESVTTIGAD-----GINQDSSISRGLSRAARPR-GNGAFGRS--SLASNNLV--NGAAVAMTP-REPPKNLREAIEAGDVLAVGSIVRNMSQEEVEVELVAQDREQGTPLMQAAAGKNAQTYRAVMDAIRSRLGVETLMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTAKYGWTPLHAAARGNAEAMGAVMNSLVNYMEADELKEQLSQSHDKDSDLPTPLMFAAASSSLDSRSLNPLLGELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAYNVLRAVGRAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFAENYMDTGQGFEAVQWLLEPEMAGKRIPSFTGPLARALETRRLDFFSSNIVLAYVSRKFSRGLPGMFSGASWKMPDMHNRDTKRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCFVVKLDSPSKIPAKEMAFYAYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCATFCFRMVAFSSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFDFDEFSGIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVHLTTCLLLKPCVSKQKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHLVFGGQASKEVDRKSERLKYVITAPGLVMIALLLGFLSIFVGDGSSDGTSSLGKQSSRNARKDKHQRGGDYDLAGLLKKLANIGVDDLRRQLKNPLKDSQ------QVLPRDAKMGTTVEHVKQLRDDITTTTAQSFRETFRESDKVSEDRAARLEARMSSLEMHLAKIAAFIESCNTNSADRVAGGGGG-----ATARATASVSN 3711
P+NRT +YR+ Q SVGTALHA+DRVQT+SAAKSQ+PGAAAAA + RR+S +G VG R+ P ++G VG+A +A+ +G A+ L RR STGQL ++ S GSNFES+TTIG G+N SISRGL+RAA R GN GR+ S +SNNL NG A+ RE P +LR AIEAGDVLAVGS+VR MSQEE EVELVAQDREQGTPLMQAAAGKN QTY AVMDAIRSRLGVE LM+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TAKYGWTPLHAAARG MGAVM +LVNYMEADELKEQLSQSHDKDSDLPTPLMFAAASSSLDSRSLNPLL ELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCL+AYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPA+NVLRAV RAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFA+NYMDTGQGFEAVQWLLEPEM GKRI SFTGPLARALETRRL+FFS+NIVLAYVSRKFSRGLPG+FSGASWKMPDMHNRDT+RFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMA DV+TYLSMLILFCFVVKL+SP+KIPAKE+AFY YMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCA F FRMVAF SDVI+EEAFFLAQLFFA+AAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGG+AP + T GVL L + G +D AT +P +FDISE+YLPSFSTF ESALTMFRAMFGDFDF+EF+G+RYG AGVGLMVAFLTVMGIVLLNLLIAFLTGAHSE R AKAKFHFTRTQIVQ WNRVVEHDVLP+PLNLVHL TC+LLKPCV K KYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHL+FGGQASKEVDRKSERLKYVITAPGLVMIAL LG L+IFVGDGSSDGTS LGK SSRN RKDK QRGGDYDLAGLLK+LANIGVDDLRRQLKNPLKDSQ QVLPRDAKMGTTVEHVKQLRDDIT TTA SFRE+FRES K+++DRAARLEARMSSLE+HLAKIAA +E+ NT +A GGG TARAT+S +N
Sbjct: 216 PANRTHAMYRH--QAESVGTALHAIDRVQTISAAKSQRPGAAAAAAAGRLXXXXXXXXIGSRRSSHTGSVGVGRKGGSGPISNGG-VGSARVSAEAAANGNAAVAAVAGTALVRRVSTGQLNNMASTGSNFESMTTIGTPSGSGGGVN---SISRGLARAAGLRSGNDGLGRARHSASSNNLAVSNGVGGAIADKRELPTDLRSAIEAGDVLAVGSMVRTMSQEEAEVELVAQDREQGTPLMQAAAGKNVQTYTAVMDAIRSRLGVEALMNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAKYGWTPLHAAARGXXXXMGAVMTALVNYMEADELKEQLSQSHDKDSDLPTPLMFAAASSSLDSRSLNPLLSELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCLIAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAVSRAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGKRISSFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCAAFTFRMVAFGSDVIEEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGSAPSLDXXXXXXXXXXXXXXXDTEGVLWFDRGGARGLLTSSG-DDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFAGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQHWNRVVEHDVLPSPLNLVHLATCVLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHLLFGGQASKEVDRKSERLKYVITAPGLVMIALFLGLLTIFVGDGSSDGTSGLGKHSSRNCRKDKLQRGGDYDLAGLLKRLANIGVDDLRRQLKNPLKDSQARPHTSQVLPRDAKMGTTVEHVKQLRDDITLTTANSFRESFRESGKMADDRAARLEARMSSLEIHLAKIAALLENGNTYNA----GGGXXXXXXITTARATSSSNN 1450
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 197 bits (501), Expect = 1.820e-47 Identity = 162/528 (30.68%), Postives = 245/528 (46.40%), Query Frame = 1
Query: 1582 GFEAVQWLLEPEMAGKRIPSFTGPLARALETRRLDFFSSNIVLAYVSRKFSRGLPGMFSGASWKMPD----------MHNRDTKRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCF-VVKLDSPSKIPAKEMAFYAYMLGNMVNELGEARYVRKLRGQS-ELWNVVEAVLLGLVCATFCFRMVAF----------------SSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFDFDEFSGIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVH-LTTCLLLKPCVSKQKYPLLMMRIGCFLFWLVMGPLGAA 3078
G VQ +LEPE+AG + GPLA+A+++R +DF + +V+ Y+ KFS GLP F W+ M N D + ++ + G PD+ + +PGLQF G+A + AF+ VPA+R+A DV+ Y ++ +F VV L +I A ++ + Y++G + ++ E + LR WNVVEA L + F FRM A+ S V + +LAQ F A +AP +VLFL Q+ +LG ++ F ++ ++ RFG ++ VI LGFA+A +A+FG + + D GG DI+E + T+ S LT+F +M G+F F+ F G AG LMV FL VM I LLNLLIA L AH+ A + + I+ Q+ R + D LP+PLN+ L +C+L + K++ + R +FWLV GP+ A
Sbjct: 527 GTTLVQEMLEPELAGLQPRDCAGPLAQAMQSRHVDFIYTPLVVDYLRLKFSAGLPNPFRETDWRREHGRVDRNLARFMVNEDESQLMVYILQGGCPDSP---------------------SWTYLPGLQFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVHEVQEAGSLRVHLFNPWNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASLPD---------------------------------GG------------DIAE-----YDTYYSSILTLFSSMLGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELISCVLWR---HKERAKEVFARA---VFWLVSGPIAIA 977
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 191 bits (485), Expect = 1.540e-45 Identity = 187/683 (27.38%), Postives = 296/683 (43.34%), Query Frame = 1
Query: 1261 LDTLSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAYNVLRAVGRAADRDAK-HRQFLLRMQSDVDELVQEMLQQLPPNMAGFAENYMDTGQGFEAVQWLLEPEMAGKRIPSFTGPLARALETRR--LDFFSSNIVLAYVSRKFSRGLPGM-----FSGASWKMPDMHNRDTKRFVLGLPYGAAPD--------------------NVVGA---------VRMRLCVPFELIQGS---ALRRTSL----IPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCFVVKLDSPSKIPAKEMAFYAYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCATFCFRMVAFSSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFDF-DEFSGIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVHLTTCLLL-------KPCVSKQKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWS--IWHLVFGGQA 3147
+ LSCL+ Y + D LS + + A C + + + NP +P + A ++A + R+ LL +Q VD L+ E+L++LP + GF G + EPE++ + GPL AL+ R+ F + ++ ++SR+F+ GLPG+ G ++ ++ + G Y A + + +G + L P L+QG+ L T++ +PG QF GL PD +Y VPA+RM D+ YL ML+ F VV + E AF Y+L ++ E E R L ++ WN+++ + LGLV R D A + A++APL FSR+LF AQ+ G M+Q++F M E+V+FGVVI V++LGFAM+ ALFG D+ GG + LT+F+AM G+ DF F G +Y L V +L V+ ++LLNLLIA L+ +HS+ A +F ++ +I++ + VV+ +LP P NLV L L + + S + +G FWL +GP+ AA +W +S ++ +WH F +A
Sbjct: 531 IGALSCLLQYPT-MFDTADLIQLSRERS--AEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGF-------DGGMTGCSAVFEPELSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPLTPGEAAFAFYILAGIITEGQEMRRDFGLYA-ADHWNILDLLGLGLVTGGLIVRCA--DGDNSWGRALY------ALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFG------------------------------------DVDTFGG---------------------------TCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMVRDRSGQGTASTRAQE----AVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSKA 1127
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: A0A6H5KIV5_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIV5_9PHAE) HSP 1 Score: 185 bits (470), Expect = 4.150e-44 Identity = 235/847 (27.74%), Postives = 369/847 (43.57%), Query Frame = 1
Query: 1156 RSLNPLLGELLG-CMCDIDEARRQRTAVDYAAAYGRLDTLSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAYNVLRAVGRAADRDAK-HRQFLLRMQSDVDELVQEMLQQLPPNMAGFAENYMDTGQGFEAVQWLLEPEMAGKR---IPSF------------TGPLARALETR-RLDFFSSN-IVLAYVSRKFSRGLPGMFSGASWKMPDMHNRDTKRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGS--ALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCFVVKLDSPSKIPAKEMAFYAYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCATFCFRMVAFSSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQ------------------ILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFDFDEFSGIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVH---LTTCLLLKPCVSKQK-YPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHLVFGGQASKEVDRKSERLKYVITAPGLVMIALLL---------GFLSIFVGDG---SSDGTSSLGKQSSRNARKDKHQRGGDYDLAGLLKKLANIG----------VDDLRRQLKNPLKDSQQVLPRDAKMG-TTVEHVKQLRDDIT 3498
R++NP++ + L M ++ + Q + + + SCL+ +G + + V+ L G A G A +C + +A NPL+ + + AA + RQ LR+Q++V++LV E+ ++LP + GF E + G G +A + PE R IPS +GPL AL+ R +L+ F + +VL Y++R F+RGLPG+ + + + + + A G V L E+++GS L +L G QF + +RP Y VPAVRMA D++ YL ML LF V + E+ F+ Y+LG ++ E+ E R+ + WN ++ L F R+ + + + A + A APL R LF AQ G M++ I+F + E++RF ++ V ++GFAM+ FALF + QT S+ R+ L T Y+D +D E PS E L + + F+G+ G L+ A+ VMGI+LLNLLIA L+ A+ + ++ + TRT +++ + + V+ D+LP PLNL+ T +L + K + G LFW V G +W +S P ++ +F + S R S + V G+ M L+L G L + DG S+DG +S G R D +R +D + K L G V LR L NP+KD V+ RD + TTVEHVK LRD++T
Sbjct: 124 RAVNPIIDDCLPLAMSEVLMSNSQVPGNEAVSVF------SCLIKHGAAPTPRQVS--LVGRKA-GFEAARKCFLDAVCSAVNPLLVGMRLSLLLADAAGMGNEGQRQVALRLQNEVEDLVLEVFERLPQTVDGFREGDVG-GSGMDACSVVFAPEKIRPRDETIPSHLFQDGTGGTRVDSGPLEMALQARHQLELFCTQPLVLDYLNRAFTRGLPGLDASETGAQEADQFKLLMQRNASVQVNAGDGESSGEVSREL---LEVLEGSHSVLGSLTLSAGKQFILAQVVARPAFSYSVPAVRMAVDLLVYLLMLALFAKDVLWYKEGTVEVGEVVFFVYVLGAILVEITELWDGRE-EYMKDHWNALDVAALAFCGGAFLVRV--YDPESLWGRALYCA------GAPLLLFRTLFFAQFMPAQGPMIEVKEARGYPSFLRDLGLSLIIFSLAGELLRFCTILLVTMMGFAMSFFALFRHSCT--------------VGSFQTYWSTSIALL-RAMLGETKLYDDFTVAAECCYDAVE---PSDEFHCEDFL---MECCHSVESEHFNGL----VGKALLAAYNVVMGIILLNLLIAVLSEAYVDVKENIDTESKVTRTLVIRHYMKAVDQDMLPPPLNLIQHAVSTLAMLFGSLMGKTGVFRKAEFYSGLVLFWFVSGLFAVLAGSILWAISWPRGVF--MFFLRRSSHSGRVSGSAQLVALFCGVAMPLLMLYKWLWTSTCGALWRHLVDGGAWSNDGGASAGYDE---IRSDGSRRPRPHDDGIIGKTLERYGGTAGQGGALNVHQLREFLANPMKDP--VVQRDEETRETTVEHVKLLRDNLT 916
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.940e-42 Identity = 151/517 (29.21%), Postives = 221/517 (42.75%), Query Frame = 1
Query: 1879 PFELIQGSALRR--------TSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCFVVKLDSPSKIPAKEMAFYAYMLGNMVNELGE-----------------------------ARYVRKLRGQS----------------------ELWNVVEAVLLGLVCATFCFRMVA---FSSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFDFDEFSGI-----------RYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVHLTTCLLLKPCVS-----------------KQKYPLLMMRIGC---------FLFWLVMGPLGAALAIAMWFVSIPWSIWHLV 3132
P E +G + RR T+++P LQF+ GL +P FY VPAVR A + + YL ML LFC VKL +IP E+AFY +M G + E+ E A++ R + + WN+++ + L V F FR++ F + FF+AQ F A +APL F+R+L L+QID LG M+QI++RML + +RFGV I V++ GFA+A A+FG S D G+D D+ S+ +F + LT+F+A G+F F++F + R AG L+VA+L V+ +V+LNLLIA L+ AH E + +FH RT+++ Q R V H +P P NLV L LL K+ + + G LF MG + L +W +S+PW W +V
Sbjct: 948 PEEQPRGRSTRRSDRNKLPHTTVLPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCACVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYEQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFIFRLLGIREFGGPADPGDYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFG-------------SCDAGSDLDE----------------------------------------SYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQLVVGFLLDGVSELAWWAVRGADRCGLRQHKESFAPITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIV 1411
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 179 bits (455), Expect = 4.270e-42 Identity = 183/637 (28.73%), Postives = 283/637 (44.43%), Query Frame = 1
Query: 1270 LSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAYNVLRAVGRAADRDA---KHRQFLLRMQSDVDELVQEMLQQLPPNMAGFAENYMDTGQGFEAVQWLLEPEMA------GKRIPSFTGPLARALET--RRLDFFSSNIVLAYVSRKFSRGLPGMFSGASWKMPDMHNRDTKRFVLGLPYGAA--PDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCFVVKLDSPSKIPAKEMAFYAYMLGNMVNELGEARYVRKLRGQS-ELWNVVEAVLLGLVCATFCFRMVAFSSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFD-FDEFSGIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVHLTT---CLLLKPCVSKQKYPLLMMRIGCFLFWLVMGPLGAALA-IAMWFVSIPWSIW 3123
LS L+ +G + + L A+ + C+++ + +A+N IP+ N+ A R A R A + R+ L R+Q DVD ++ E L +LP + G + G A LLEPE A G+R GPLARAL R + F ++ + + ++ KF+RGLP + G S + + D + G A P +++G R V L + L + PG F G+ + P+++Y+VP +RMA D + + L F V L + EMAF Y++ ++ E E + L G + W + L + A F R A SD + A+ +PL + R+L+ AQ+ + G +Q+L+ M E+ +F VV+GV++LGFAM+ FALF R + G L L F+AM G+ FD+F G ++ A L+V++L VM I+LLNLLIA L+ AH + + + R +W VV D LPAP NL L C ++ YP+ +G +FWLV+GP GA L I +W VS P +++
Sbjct: 425 LSMLLQHGTKPHPADLVILCR---AIDYEELDECLFQAVASAKNSFIPSLNLSFAF-RDAIRSAASERDRRVLARLQHDVDSILTETLDRLPQTVCGLSG-------GMAACTALLEPEEADDSSTYGER-----GPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDGHSVLILEKSRLDVREEAKGHESLTALCPGSILGGFLPR--VGKLLWEDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLFEKGSLTIAEMAFAIYVVAAIMLEATEMW--KDLAGYLLDRWKAPHFLALVVALAAFLAR--AIDSDSSWGRGLY------AVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALF-----------------RDVKGETLRGAL--------------------------------------------LDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVLIRVSRARVYTHYRW--VVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARRGVGRIVFWLVLGP-GAILGGIFVWLVSTPKALF 969
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 175 bits (444), Expect = 7.170e-41 Identity = 180/643 (27.99%), Postives = 290/643 (45.10%), Query Frame = 1
Query: 1270 LSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAYNVLRAVGRAADRDA---KHRQFLLRMQSDVDELVQEMLQQLPPNMAGFAENYMDTGQGFEAVQWLLEPEMA------GKRIPSFTGPLARALET--RRLDFFSSNIVLAYVSRKFSRGLPGMFSGASWKMPDMHNRDTKRFVLGLPYGAA--PDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCFVVKLDSPSKIPAKEMAFYAYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCATFCFRMV----AFSSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFD-FDEFSGIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVHLTT---CLLLKPCVSKQKYPLLMMRIGCFLFWLVMGPLGAALA-IAMWFVSIP---WSIW 3123
LS L+ +G + + L A+ + C+++ + +A+N IP+ N+ A R A R A + R+ L R+Q DVD ++ E L +LP ++ G + G A LLEPE+A G+R GPLARAL R + F ++ + + ++ KF+RGLP + G S + + D + G A P +++G R V L L + PG F G+ + P+++Y+VP +RMA + + + + L F V L ++ E+AF Y++ ++ E +E+W + LL A +V AF + I ++ + L+ A+ +PL + R+L+ AQ+ + G +Q+L+ M E+ +F VV+GV++LGFAM+ FALF R + G L L F+AM G+ FD+F G ++ A L+V++L VM I+LLNLLIA L+ AH + + + R +W VV D LPAP NL L C ++ YP+ +G +FWL++GP GA L + +W VS P ++IW
Sbjct: 334 LSMLLQHGTKPHPTDLVILCR---AIDYEELDECLFQAVASAKNSFIPSLNLSFAF-RDAIRSAASERDRRVLARLQHDVDSILTETLNRLPQSVCGLSG-------GMAACTALLEPEVADDSSTYGER-----GPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPALKDGHSVLILEKSRLDIREEAKGHESLTALCPGSILGGFLPR--VGKLLWDDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVLLFEKGQLTIAEVAFAIYVVAAIMLEA------------TEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSSWGRGLY-AVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALF-----------------RDVKGETIRGAL--------------------------------------------LDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVLIRVSRARVYTHYRW--VVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARRGVGRIVFWLLLGP-GAILGGVFVWLVSTPKALFAIW 881
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: A0A6H5KCQ6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ6_9PHAE) HSP 1 Score: 171 bits (432), Expect = 9.500e-40 Identity = 193/699 (27.61%), Postives = 307/699 (43.92%), Query Frame = 1
Query: 1207 DEARRQRTAVDYAAAY-GRLDTLSCLMAYGCEISDQTVTTLL------SGDLAV---GAAAFNRCIWKGITTAR---NPLIPAYNVLRAVGRAADRDAKH-------RQFLLRMQSDVDELVQEMLQQLPPNMAGFAENYMDTGQGFEAVQWLLEPEMAGKRIPSFTG---PLAR----------ALETRRLDFFSSNIVLAYVSRKFSRGLPGMFSGASWKMPDMHNRDTKRFVLGLPY-----GAAPDNVVGAVRMRLCVPFELIQGSALRR-------TSLIPG---LQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCF-VVKLDSPSKIPAKEMAFYAYMLGNM-------VNELGEARYVRKLRGQSELWNVVEAVLLGLVCATFCFRMVAF----------------SSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQ--IDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFDFDEFSGIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVH-LTTCLLLKPCVSKQKYPLLMMRIGCFLFWLVMGPLGAA 3078
DE+ Q TA+D AA +L + CL+A G + + V LL G +AV G AA C + + NPLIP N+ A+ A + +H R LL+M++D++ LV +L+ LP + GF + + G A +P++ K P+ T P+++ A+E + + + ++R + G A+ + D+ + ++ G P + G + E + A++ T L+ L+F G+A + AF+ VPA+R+A DV+ Y ++ +F VV L +I A ++ + Y++G + V+E+ EA +R WNVVEA L + F FRM A+ S V + +LAQ F A +AP +VLFL Q + +LG ++ F ++ ++ RFG ++ VI LGFA+A +A+FG + + D GG DI+E + T+ S LT+F +MFG+F F+ F G AG LMV FL VM I LLNLLIA L AH+ A + + I+ Q+ R + D LP+PLN+ L +C+L + K++ + R +FWLV GP+ A
Sbjct: 16 DESEAQLTALDLAARPPAKLGVIKCLLACGAIPTARVVQRLLRTCSEDGGAVAVSGSGLAAVRECFLGAMIASEWAVNPLIPGLNLYTAINAARRQVGRHVKACGAMRNNLLQMKNDINALVLSVLRHLPDTVEGF-DRFSTPAAGNAAGTGAAKPKLGKKTNPTLTPAKLPVSKVSTFEEDHDGAVEEGNATAATKLNLTSTIARGVTAASSGRLEAAAADLDDVPASEVGTSLVQEMLEPELAGLQPRDCAGPLAQARRACGETSKSFAMQSRHVDFIYTPLVVDYLRLKFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVWMVVHEVQEAGSLRVHLFNP--WNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQARVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASLPD---------------------------------GG------------DIAE-----YDTYYSSILTLFSSMFGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELISCVLWR---HKERAKEVFARA---VFWLVSGPIAIA 655
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 167 bits (424), Expect = 3.770e-38 Identity = 140/490 (28.57%), Postives = 212/490 (43.27%), Query Frame = 1
Query: 1915 TSLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCFVVKLDSPSKIPAKEMAFYAYMLGNMVNELGE-------------ARYVRKLRGQS-----------------------------------ELWNVVEAVLLGLVCATFCFRMVAFSSDVIQEEAFFL--AQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFDFDEFS------------GIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVHLTTCLLL-----------------------KPCVSKQKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHL 3129
++++PGLQF+ G+ +P+ FY+VP +R AF++ +YL ML+LFCF V L IP E+ FY + G + E+ E R V K G + + WN ++ +G + F FRM+A ++ FFL AQ F+A++APL FSR+L L+QID LG M Q+++RM+ +RF I +++L FA+A A+F T G S+ Q T +D F + + +F TF +S +T+F G DF+ F G R AG+ L+V ++ M +VLLNLLIA L+ H + A+ +FH R +++ Q RVV P PLNL+ L +LL KP + ++ L + F G L+ +W VS+PW W L
Sbjct: 982 STMLPGLQFSLAGIQGKPETFYKVPVIRFAFEIFSYLVMLVLFCFSVLLKEHDSIPWGEVTFYVFAAGLLWREILEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIAL------DDKFFLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVF-----------------------HTCGEY-------SEPQCTLDDDDA-------FPLRD----AFGTFGDSFVTVFTYALGGPDFEAFQLAGSDCRCDLPEGAR--NAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFHHARARLIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTEVWRVGVWVTRGRSQARMLKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSTILWIVSVPWVAWCL 1422
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 156 bits (395), Expect = 7.540e-35 Identity = 127/402 (31.59%), Postives = 185/402 (46.02%), Query Frame = 1
Query: 1918 SLIPGLQFNCVGLASRPDAFYEVPAVRMAFDVITYLSMLILFCFVVKLDSPSKIPAKEMAFYAYMLGNMVNELGE------ARYVRKLRGQS---------------------------------ELWNVVEAVLLGLVCATFCFRMVA-FSSDVIQEEAFFLAQLFFAIAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPGIGDDSESASSDRGADEDQTTGVLSLGPFPRSDLQATGGYEDGATQNPATFDISEVYLPSFSTFSESALTMFRAMFGDFDFDEFS------------GIRYGPAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSETRKLAKAKFHFTRTQIVQQWNRVVEHDVLPAPLNLVHL 2967
+++PGLQF+ G+ +P+ F++VP +R +++ +YL ML+LFC V L P IP E+ FY + G + E+ E R R G + WN ++ + + F FRM+A F S E F AQ F+A++APL FSR+L L+QID LG M Q+++RM+ ++RF I +++L FA+A A+F G+ SE + D+D FP D +F TF +S LT+F + G +FD F G R AG+ +MV + M +VLLNLLIA L+ AH E A+ +FH R ++V Q R V H P PLNLV L
Sbjct: 857 TILPGLQFSLAGILGKPETFFKVPVIRFVYEIFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRTSGGPRTEEGGRVEPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDTSTICCIFVAFIFRMIARFDS----EFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVF----HTCGEHSEPQCT---LDDDDA--------FPLRD--------------------------AFGTFGDSLLTVFSSALGGPEFDLFDDAGSDCRCNLPRGAR--SAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSARSVAHRRPPPPLNLVKL 1211 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig79.15440.1 >prot_C-linearis_contig79.15440.1 ID=prot_C-linearis_contig79.15440.1|Name=mRNA_C-linearis_contig79.15440.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1239bp GGKGSTNSGFGDLSGGDTGDEAHPSNRTQTLYRNHNQHGSVGTALHAVDRback to top mRNA from alignment at C-linearis_contig79:730294..743332+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig79.15440.1 ID=mRNA_C-linearis_contig79.15440.1|Name=mRNA_C-linearis_contig79.15440.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=13039bp|location=Sequence derived from alignment at C-linearis_contig79:730294..743332+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig79:730294..743332+ >mRNA_C-linearis_contig79.15440.1 ID=mRNA_C-linearis_contig79.15440.1|Name=mRNA_C-linearis_contig79.15440.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7434bp|location=Sequence derived from alignment at C-linearis_contig79:730294..743332+ (Chordaria linearis ClinC8C monoicous)back to top |