mRNA_C-linearis_contig79.15391.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig79.15391.1
Unique NamemRNA_C-linearis_contig79.15391.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A6H5JBP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP3_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 6.290e-128
Identity = 195/226 (86.28%), Postives = 209/226 (92.48%), Query Frame = 2 
Query:  200 DQHMPKWALDPLLTESSPLQSGPRGDGHGAVNRGGPVDHDPDSEGDYDSEFSDEDMGRYSGIRTVRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQAAMRRDHDAIA 877
            D HMPKWALDPLLTESSPLQ+G   +GHGAV+       +PDSE DYDS+FSDEDM RYSG+RTVRRGCLLDSLLLLNA+TVI ALGVGVAQG+VL Y KDLSPESVAVRCYNILFC+LI+MAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFG+YIT++AWIMVGIGALYFLLG+CCVKRIRDKK ARHKTLVAHAEMQAAMRRDHDAIA
Sbjct:    5 DPHMPKWALDPLLTESSPLQTGRGTEGHGAVDGA----DEPDSEADYDSDFSDEDMARYSGVRTVRRGCLLDSLLLLNAITVIAALGVGVAQGMVLAYHKDLSPESVAVRCYNILFCMLIIMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGLYITIVAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA 226
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: D8LMH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH6_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 9.330e-103
Identity = 159/171 (92.98%), Postives = 167/171 (97.66%), Query Frame = 2 
Query:  365 MGRYSGIRTVRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQAAMRRDHDAIA 877
            M RYSG+RTVRRGCLLDSLLLLNA+TVI ALGVGVAQG+VLGY KDLSPESVAVRCYNILFC+LI+MAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFG+YIT+IAWIMVGIGALYFLLG+CCVKRIRDKK ARHKTLVAHAEMQAAMRRDHDAIA
Sbjct:    1 MARYSGVRTVRRGCLLDSLLLLNAITVIAALGVGVAQGMVLGYHKDLSPESVAVRCYNILFCMLIIMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGLYITIIAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA 171
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: W7TYB2_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYB2_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.440e-27
Identity = 64/159 (40.25%), Postives = 103/159 (64.78%), Query Frame = 2 
Query:  392 VRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQAAMRRDHD 868
            +RRGC L   L +NAV V++AL V VA+ L + Y   LSP  +A+R Y I+F + +V  EL WT  VR+ ++L +WI RG +Y+FVG+L +++E E    +    ++I      ++G+G LYF++G+ C+K +RD++AA +  L + AE++ A+RR  D
Sbjct:  104 IRRGCCLSIFLAINAVCVLSALSVAVAEILSIVYH-GLSPLGIAIRVYGIVFSIGVVFTELGWTQAVRDTWLLQNWISRGAIYTFVGLLSIKQEVEHEARINIVNVFIYCAGLGLIGLGVLYFVMGVFCLKGVRDRRAADYTILKSQAELEEALRRHGD 261
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A4D9D1W9_9STRA (Cryptochrome DASH n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 7.890e-25
Identity = 64/159 (40.25%), Postives = 102/159 (64.15%), Query Frame = 2 
Query:  392 VRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQAAMRRDHD 868
            +RRGC L   L +NAV V++AL V VA+ L + Y   LSP  +A+R Y I+F + +V  EL WT  VR+ ++L +WI RG +Y+FVG+L +++E E    +     +I      ++G+G LYF++G+ C+K +RD++AA +  L + AE++ A+RR  D
Sbjct:  572 IRRGCCLSIFLAINAVCVLSALSVAVAEILSIVYH-GLSPLGIAIRVYGIVFSIGVVFTELGWTQAVRDTWLLQNWISRGAIYTFVGLLSIKQEVEHEARINIVNAFIYCAGLGLIGLGVLYFVMGVFCLKGVRDRRAADYTILKSQAELEEALRRHGD 729
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7R9WMH7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WMH7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.470e-20
Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 2 
Query:  395 RRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGL----DLGGFGI---YITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHA-EMQAAMRRDHD 868
            RR C+    +++N +TVI A  + VAQ L + Y K LS     +R Y I  C +IVM ELEWT+ +RE  +L +W+ RG++Y+FVGVL +E+ +        D   F +   +I V++ IMVG+G LYF++GICC++ + +K    ++  VA A +M AA +  +D
Sbjct:   54 RRKCVHKVFVVINGITVIIATLMFVAQLLGI-YFKTLSLVDYVLRVYIIALCAMIVMNELEWTSVIRESRLLRNWLTRGLIYAFVGVLGIEQYEASPSGRHDDSAHFDVAMNFIRVVSNIMVGVGGLYFVMGICCMQLVSNKLRHEYEERVARAGDMHAAAQTYND 218
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7S2KE92_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KE92_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.880e-16
Identity = 54/165 (32.73%), Postives = 94/165 (56.97%), Query Frame = 2 
Query:  392 VRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGY--RKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDL-------------GGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEM 841
            VR+ CL      +++VT ++AL +G++Q L + +    ++ P  +A+R Y  LFC+ +++AELE    +  M +LHSW+ RG+VYSF+G++ +EE      DL             G   ++I + ++ M  +G LYFL+G  C++R+RD    ++   +  AEM
Sbjct:  124 VRKSCLHLFFDCVSSVTALSALCMGLSQVLPMFFVDEGEIGPVQMALRVYMTLFCVGVIVAELE-CLLINRMPLLHSWLVRGIVYSFLGIVGMEESVAVKFDLNNDDDSSVPTTREGHASLFIKLSSYAMTALGVLYFLMGCLCMRRLRDNCRTKYNERIKKAEM 287
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A836CNQ0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ0_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.040e-15
Identity = 48/117 (41.03%), Postives = 71/117 (60.68%), Query Frame = 2 
Query:  443 VITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIR 793
            VI A+GV +A  LVL    +LS    AVR Y I+FC+ I++AELEW + ++   +L  W  RG++Y+FVG+L LE  D     +     YI    WI+VG+G LYF +G+  + ++R
Sbjct:    1 VIVAVGVIIALILVLALSNNLSHVEFAVRVYAIVFCIGIILAELEWPSIMKNAVLLRWWPVRGLLYTFVGLLTLEISDFNDNPVAEAFHYIF--GWILVGVGVLYFFMGLARLHKVR 115
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7S1FP16_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP16_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.420e-14
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 2 
Query:  422 LLLNAVTVITALGVGVAQGLVLG-YRKDLSPES----------------VAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEK------GLDLGGFGIYIT-----VIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLV 826
            ++L  VTV +A  +G +Q LV G Y  +   +S                VA++CY ++FCL IV+AELEW   ++   +L  W  RG++YSF+GVL +EE   K      G       ++I      V A ++V  G LYF++G+ C+ +IRDK    +K LV
Sbjct:  239 IVLQVVTVASAAFLGTSQALVTGWYDPNTGDQSTGAEAAPYFWNRDLIEVAIQCYLVVFCLTIVLAELEWPGPIKRSNILQFWPFRGILYSFIGVLGMEESIVKPRTLAEGTTWSSSPVFIAHMALKVSAMVLVVTGCLYFIMGLLCINKIRDKCRQNYKELV 401
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7S4VKT3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VKT3_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.810e-12
Identity = 45/132 (34.09%), Postives = 79/132 (59.85%), Query Frame = 2 
Query:  428 LNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEED-----EKGLD--LGGFGI-YITVIAWIMVGIGALYFLLGICCVKRIRDK 799
            +N +T++ A+  G+ Q + + + + + P    +R Y I    L+++ ELE ++      +L+ WI RG+ Y+F+GVL LEE       ++G D  +   GI +I V+AW+MVGIG LYF++G  C++ + +K
Sbjct:   48 INFITIMIAILYGIGQFIGIAFEQ-VGPVQYVLRVYVIALSALVILNELELSSLTTTSKLLNMWITRGLTYAFIGVLGLEENGGVVQVQEGADTEMRDMGILFIKVVAWMMVGIGCLYFVMGCLCLQIVLNK 178
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BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7S0AVP1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AVP1_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.290e-11
Identity = 52/171 (30.41%), Postives = 90/171 (52.63%), Query Frame = 2 
Query:  335 DYDSEFSDEDMGRYSGIRTVRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTT-VREMFVLHSWIPRGVVYSFVGVL--------VLEEE------DEKGLDLGGF-GIYITVIAWIMVGIGALYFLLGICCVKRIRDK 799
            +Y ++  +      SG+   RR C     ++LN + V   L + ++Q L + + K+ +   + +R Y   FCL+ + AE+E     VR    LH++I +G  YSFV +         ++EE       D  G+D   F  +++ + AW+M+G+GALY LLGI C++ +RD+
Sbjct:  133 EYKTKLEERRRKMLSGLP--RRNCCHGLFIILNIIAVAACLLLILSQVLPIFFVKEQTLLQLTLRGYLTFFCLIFIFAEMELPLPFVRSSQSLHNFISKGFNYSFVSICAMTQAEADLIEESIKKRTMDPMGIDFSWFHALFVEIPAWVMLGVGALYMLLGILCMRPVRDR 301
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JBP3_9PHAE6.290e-12886.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMH6_ECTSI9.330e-10392.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TYB2_9STRA3.440e-2740.25Golgi apparatus membrane protein TVP15 n=1 Tax=Nan... [more]
A0A4D9D1W9_9STRA7.890e-2540.25Cryptochrome DASH n=1 Tax=Nannochloropsis salina C... [more]
A0A7R9WMH7_9STRA1.470e-2039.16Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2KE92_9STRA6.880e-1632.73Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A836CNQ0_9STRA1.040e-1541.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S1FP16_9STRA3.420e-1434.97Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4VKT3_9STRA3.810e-1234.09Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0AVP1_9STRA2.290e-1130.41Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:144112..149933 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.2
Seed ortholog evalue1e-85
Seed eggNOG ortholog2880.D8LMH6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COPI associated protein
EggNOG OGs2C5ZJ@1,2SE8F@2759
Ec32 ortholog descriptionGolgi apparatus membrane protein TVP15
Ec32 orthologEc-05_002800.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2220
Cds size690
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15391.1prot_C-linearis_contig79.15391.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig79 145452..148079 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930491.3873537-UTR-C-linearis_contig79:144111..1454511622930491.3873537-UTR-C-linearis_contig79:144111..145451Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 144112..145451 -
1690881097.0224478-UTR-C-linearis_contig79:144111..1454511690881097.0224478-UTR-C-linearis_contig79:144111..145451Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 144112..145451 -
1622930491.4774442-UTR-C-linearis_contig79:148079..1481061622930491.4774442-UTR-C-linearis_contig79:148079..148106Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 148080..148106 -
1690881097.1095617-UTR-C-linearis_contig79:148079..1481061690881097.1095617-UTR-C-linearis_contig79:148079..148106Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 148080..148106 -
1622930491.5152495-UTR-C-linearis_contig79:149770..1499331622930491.5152495-UTR-C-linearis_contig79:149770..149933Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 149771..149933 -
1690881097.1257474-UTR-C-linearis_contig79:149770..1499331690881097.1257474-UTR-C-linearis_contig79:149770..149933Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 149771..149933 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930491.40288-CDS-C-linearis_contig79:145451..1455651622930491.40288-CDS-C-linearis_contig79:145451..145565Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 145452..145565 -
1690881097.0362897-CDS-C-linearis_contig79:145451..1455651690881097.0362897-CDS-C-linearis_contig79:145451..145565Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 145452..145565 -
1622930491.4199116-CDS-C-linearis_contig79:146185..1463061622930491.4199116-CDS-C-linearis_contig79:146185..146306Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 146186..146306 -
1690881097.0470495-CDS-C-linearis_contig79:146185..1463061690881097.0470495-CDS-C-linearis_contig79:146185..146306Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 146186..146306 -
1622930491.4336135-CDS-C-linearis_contig79:146643..1467791622930491.4336135-CDS-C-linearis_contig79:146643..146779Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 146644..146779 -
1690881097.0618677-CDS-C-linearis_contig79:146643..1467791690881097.0618677-CDS-C-linearis_contig79:146643..146779Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 146644..146779 -
1622930491.4495213-CDS-C-linearis_contig79:147388..1475241622930491.4495213-CDS-C-linearis_contig79:147388..147524Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 147389..147524 -
1690881097.0777812-CDS-C-linearis_contig79:147388..1475241690881097.0777812-CDS-C-linearis_contig79:147388..147524Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 147389..147524 -
1622930491.463395-CDS-C-linearis_contig79:147896..1480791622930491.463395-CDS-C-linearis_contig79:147896..148079Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 147897..148079 -
1690881097.0996099-CDS-C-linearis_contig79:147896..1480791690881097.0996099-CDS-C-linearis_contig79:147896..148079Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 147897..148079 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig79.15391.1

>prot_C-linearis_contig79.15391.1 ID=prot_C-linearis_contig79.15391.1|Name=mRNA_C-linearis_contig79.15391.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=230bp
MSGDQHMPKWALDPLLTESSPLQSGPRGDGHGAVNRGGPVDHDPDSEGDY
DSEFSDEDMGRYSGIRTVRRGCLLDSLLLLNAVTVITALGVGVAQGLVLG
YRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVY
SFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRI
RDKKAARHKTLVAHAEMQAAMRRDHDAIA*
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mRNA from alignment at C-linearis_contig79:144112..149933-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig79.15391.1 ID=mRNA_C-linearis_contig79.15391.1|Name=mRNA_C-linearis_contig79.15391.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5822bp|location=Sequence derived from alignment at C-linearis_contig79:144112..149933- (Chordaria linearis ClinC8C monoicous)
AGAGCAGAGAGCCAAGAAGCAGCAAGAAGGAAGCGGCACGTGTGTGTCTT
TTTCATTCTTGGTGAGCAACGTTCCTGCAAGTCGCTGGGAAGGAAGGGGA
TTCAAACGAAGAACTCGCCGGAAGCGGTGTCTTGTGTGCGTTCATCTGGC
ACCCAATTCCCCGGTGTGTGTGTCCCCTCTCCCGCCAGCCTTGCTCTCTT
GCCCCCGCTCCGGGCGCATGTGCGTGTGGGTGATGTGTTGCCTTCAGTCT
TTGCTTGGGATTAATGTAGAGGTGGCTTGGTTCTGTCATCGCGCGTTGAA
CTCAGACCATGTCGGACTTTCTGTCTACTCTGGGGCACAGCGCCAAGGCG
AGTTGAAGGGGATACAGGCAGCGTGCACACCCGGCACTCCAGCCTCTAGA
GCGCTGCCACGGTGGTGGTGCTGCGGTTGAGGGGGTGTTGGAAAGAAAGA
TGATGCTACATAAGCCAACTGTGTCATGTCTGCGCAGGTTTGCCGACGCA
CATCGCACTCTTTATCTCACCCAGTGTCTCAACACCTACAACATCTCTCT
CGGCGACAACGCGCACAAGAGCAAGTCCGTAGTCTCTACTTGTACCCCCG
TGAAACAACCAACAACAAGACACCCCCGGCGCATTTCCTTGGAGTCAACG
GTGACCCTAGAAGACCTTGCAAAAGCCTCCTTCTCTCCTTTGTTTTCATG
AGTTCAAGCTGTTATCATTCTAGTTTTGTTCTCCATCATGTGCAGTACAT
ATATACCATACGAAGTAGACTTAACATTCGAGTGTGTACCTAAATATATG
GTACTGAGTATACGTAAAGCCGGTCGCCCCGGTGGACTAGTGGTTTAACC
TCGAATCCACTAGCAGCAAAGTCTGGAGTTCAATTCCAAGCAAAGGTGAT
TATTTTGCGACTTTGCAGGTTAAAGCGATAACATAGCTGGAAAAGCTCAT
GAGTACCAAACTTCGACTTAGCACGTTGACGAGGGAAAGGGATGGCTGCA
CCCTTCTCGCGATAAAATTCAAGGCAAGCACCGCAGGAGGAAGGTGGGGC
AAAAACCCAGAAACAGAAAAAGAAGAAAAAAAGCCCCAGTGTTTATACCC
CCTCCTGTGTGACCCCGGTTGGTTCTAGTTGTACAGAAAAATACACTGAA
CAAGTGTAGTGCTCTAAATACACCGCAACGTGTAGTACACGTCTCGCCTT
GATCGGAAAGGGACTGTCGCCAAATAAATGGGACGAAAACACACACACAC
ACACACACACACACACAGCCCCAAGGGCGCCAAAGTGAGAGAGAACAACG
GGAGGGATGCAGTCAGAAGTGCCCTCTCTTGGGGCGCAGGCCAGAGTTTG
ATGGCCACAGTAGTCCCAAAAGCTCCACGCGCATCTGTATAGTAACATGG
ACCGAAATGAAACCGACCCTTAGCGAGCTCCTTCCTTCCCTGCAGGAGCA
CGCTGTGGCTGCTGTCAGTTGCTCTGAAGCAGCAATCCCAAATACCTATG
TACAATCACCATACCAAAGATGACGTCCTTCGGCCATATGACGTCACGTA
CCCTATCTCTAGCGTAGATCATGAAGAGTGACGACTCTTGCTTTCTCTAC
AGCCTTCTATCTTACTCTCAAATGCAATGTTTGGGTGCTTTGAGAGACAG
GCCCGAGCAGGAGGGAGAGCAGACCCGCTCGTGTGTATTTACTTGTCTCG
TAGCGCACGCACACACGATCAAGTCCTTCCTAGAACTTGTATGTTGTATC
CTAAAATACCGAACATTTGTTTAGTCTGCTGTCATTTGCAATATTAAAAC
ATCGAGCCACACTTTCTTGTTTAGCAGGCAAGAGGGGGGAAACAAGAGGA
AAGCATGTCAGGAGACCAGCACATGCCCAAGTGGGCCCTGGATCCCTTGC
TCACGGAGTCAAGCCCCCTCCAGTCCGGGCCAAGGGGCGATGGCCACGGC
GCCGTCAACAGAGGGGGTCCCGTGGATCATGATCCGGACAGCGAGGGCGA
CTACGACTCGGAGTTTTCCGACGAAGACATGGGACGGGTGAGAGATGCGA
GAAATTACGATACGTAACGTAGCGGCTAGGCACTAAATAGCCGGGCGTAG
ACTAAAGCAGACAATTTACAGCACAGAGATAAATTTAGCTGTTTTAGGTT
TGGAACATGACGTATGGAACAGGGTCGAGAACCAAGCAAGAACCTTGAAA
AATGATTGGTAATATAGTGGTGAAGGTGAAGTCGATAGACCAAACGGCAA
TCGGAAGATATTAAGCGGGAAGTGCAGCGACACCCGAAAAGCGAAGATAA
GTGGGGGAAATCGATGCATGTCTAACTCTACCACTACTGTTGTGTACATG
TCGCTATTATAATTTATTGCAATCCCGAATTAAACGTGACTTAATCCTGA
CCCCAACAGTATTCGGGAATCCGAACGGTGAGGCGGGGCTGTCTCCTGGA
CTCGTTGCTCCTGCTCAATGCCGTCACCGTCATTACGGCGCTGGGGGTGG
GGGTTGCACAGGGGCTCGTGTTGGGATACCGCAAGGACTTATCCCGTGAG
TGATGGACTGGTTGGGATCTGATACAGAGTACCTGGTAGTTGTATATACG
AAGTATATCGTTGTTGGGGGCGGCGAGGAAGGGGGTTAGCGTGTCTACAA
GAGTGCCCCCCCCCCGGAAATGCTTGTTTTCGCATGTTTAGACCAAAAAC
CTGACGATTTGTGCTGAGATAGGAAACCGCGACGGTTGTGATTTGCTTTA
CGAATGTGCCGTGGTGATTGGTGGAGCTGTAAACCAGGGCAAAACTTTGT
CGTCATAACTGCTGGAATCACGCGTATCCACCGTGTTTTCTGAGGCTGTC
ATGCCCGGGGTACTGGCTGAAGTCACATCTCGTGTTTGAGAGGGGTTTTC
AACGGTTGTGTGCTCCTCTCGCGGTGTATGTCCGCTAGTCCTTGGTTGCC
CATACCTGCCCCTAGTGTCGCGATGTCACAACTCCGAAACCATTACCGGA
ATCCTCAGCACGAAGCAATACCACGCCGGCGTCCTGTAAAACCGATATAA
CCCCAAAAATTCGATGCCTGCACCTCGATCTTAACCTCGAACTTGGTGTT
CTCGTCCTCATATTTGGCGTATTTTGTTGTCTTTTGTGTCCTCGTGCTTG
CCAGCGGAATCGGTGGCGGTGCGGTGCTACAACATCTTGTTCTGTCTGCT
CATCGTCATGGCGGAGCTGGAGTGGACGACGACCGTGCGGGAGATGTTCG
TGCTTCACTCCTGGATTCCGAGAGGCGTCGTGTATTCTTTGTGGGTCCAC
GGTACTCTTCGAAGCTGCTGTTGTGGTACACGTTTCTCTCCGCCGGCTTG
GTACAGCGAAAGCATGCACTTCACAAGTCTGAGTCTGTAAGACCGAGAGA
GAGGCCTTTTGTTCGGTGCGTCCCTTGCTGGTGTCAACTCAACTCAACGG
GTAGGTGCGACATCGACGCACATCGACGCACAACTAGTCAGAAAACCTTA
GCATCAACTCATCCCATCCCGCCACTTGGGTGTTGGTTGGTTGAGTTGTG
TGTCTTGTCTGGGCATCATTCAAGGATTCAGCCACGTTTTTGTTTTTGTG
TGTTTTCCTTTGGACAAACGTGATCAGCGTTGGCGTGCTGGTGTTGGAGG
AGGAAGATGAAAAAGGGCTGGACCTCGGAGGGTTCGGCATCTACATCACC
GTCATCGCCTGGATCATGGTCGGCATAGGGGCCCTCTACTTTCTGCTGGT
GAGGTCTACTTTATAGTGCTGGGCGAAGCGGAAATTTGAGCGTTAAGTGT
CTCGTGATATACGGCCATCACGCTGATAAGACCAGGGGCGCAAGGTCGGG
TTCCTTCAGCATCGATCCGTCTGCTGAGGAGGTGGTCCCTCTTTGGTGCG
GACGTTTTCTCCCTCGCGTTGCTGTGTATACTTGGAAGGATCATGGCACC
CAAGCAGTTCTGTCAGGCCTGCCTAAGCTACATTGGTGTCCTAGACGGAC
GTCCGTTGCCTTGGCCATGATCATGCCTGTGTCGTCATCATCCTGGTGCT
TGTCAGGCTCGGCGCTGTTTCCTTCGCGGAGAATGTTGGTGCATTTTGAG
ACTTTTTTTTTCTCCCAGTCCATCAGTTTTAGACATGTGTTGTAGGTACG
CATTTTCTCTGCCGCGCTGAGTTCATTTCTGATTCTTTTTTGTCTGTTGA
TGATACCACGGTGCTCATGATTCATTACAGCTCATGCTGTCCTTCACGAG
CATCCAAGTCGTCGGTCCACAAATTATTGTTTTCCCTGTTTGGTTCTGGT
GGCAAGTTCCTCGCCACTGCTGTCCAACCTAGGGGCTCACTGTCTCTCTC
GTTTCTTGATGTTGTCAGGGTATCTGCTGCGTGAAACGAATCCGAGACAA
GAAGGCGGCCAGGCACAAGACCCTGGTAGCCCACGCGGAGATGCAGGCGG
CAATGAGAAGAGATCACGACGCCATCGCGTGAATGAAACTACAGCAGGCC
TCTTGTTCTTCCCCACGACAATGATGGCGTCCACGATACAGAGTAGTATT
CGTCCACCACCGATCGCCAGTCTTGGATTTTCCCAGAGCAATCGTCTCTG
TTTTGCATAGTGGCCCTTCATTCTAGCAGCATATTCGACAGCGTTCACGC
GGGGAACGAGGCCGGAGCGGGTTATCGTAACCGCTTATTCGCGACGTCGC
ACACGTCGTTGCCAAAGCCAAATCCATATCCGCAGTCCTCTGCAACCAAT
ACAAGGATATCCAGTGTTGCAGAAGAAAGACGTGTGCGGTGCGGCAAGAA
GGCCGCGTTGCGTTGTTCACCAACTCCGTTTCATAGTCTAGCAGGTTTGG
GGTGTGGGTCAATCTACCGGAGATGGCGGACAGTTGAGAGGGTAGAGGGT
ACATTAGATTAGGAGCCTGAACGCATGAACGATCTTGAGAAGGAAAGGCC
TGCATGGGAAATGTCTGCCTTCCTTTCATGAATGGGTTGCTTCAGAAGAC
GGTTTGCAACCATATTCACCACGGGATTTTGGAGGAGCGTGCGGTGCGCC
TGGTCCTTCCTTCGTTCCTGGTAGACTGTCTTTAGCCTTCGGACAGTGGT
GTGAGATCAGCTACAGTACACTCGTTGTACTTGTGTGAGCCAGGCACCGA
GACTCACTCCAACCTCCCGGCTCTCAAGCTCTCAAGTGATACGTCGCAAT
CCATGTTGATGTTTAAAAGTGTAAGTAGCGTTGTTGTGTGCATTTATGGA
ACCATGCGTCTGGTGTATGGTGAATGTTGAGGGTTTCGCACTTTTCGCGA
AGTCAGGAGAGAGGGGGGGGGAAGAGAGACGGCGCTCGGCCGGGAAACTC
CGTTTTTCGTTCCGTCTACCGTTCCGTTCACTCGAGTTTATTTTGTTTTT
GTTTCGTCAGTGATAAAAAGAGGCCCTACTGCAGCGTTAAAAGCGGCCAG
GAATGCGCGCGCTGTGCAAAAGGGCAGCACGCAAGTACCCTCTAGCGCAA
GCGTGTGAGGTAGTGAGTGGGTGAGACCGTCGATGCTTGTTTTTGCGGTA
CTGCTTGTAGGACGTTGTTGTAGCGAGGCACATGTGTGGGAATCCTGTTT
TTCCATTTTTCAGTCATGTCTCGAGCGTGGCGTGGTGTTTGTGATTTTGG
TGTTGTCTCGCAGGGCGTTTTTTGTTGCCTGTGCCCGCGAAAAGGTGAAG
TGTCTCTTTGAAAGGGCTTTGATTCGATTCGATGTCTGTTGCTTGAGTTG
ACAAGTGATGTGGCAGGCAGGAGCATGAACGGATGGTAATGAATGGTGAG
CTCGCCCCCCTATCCTGCACTC
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Coding sequence (CDS) from alignment at C-linearis_contig79:144112..149933-

>mRNA_C-linearis_contig79.15391.1 ID=mRNA_C-linearis_contig79.15391.1|Name=mRNA_C-linearis_contig79.15391.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at C-linearis_contig79:144112..149933- (Chordaria linearis ClinC8C monoicous)
ATGTCAGGAGACCAGCACATGCCCAAGTGGGCCCTGGATCCCTTGCTCAC
GGAGTCAAGCCCCCTCCAGTCCGGGCCAAGGGGCGATGGCCACGGCGCCG
TCAACAGAGGGGGTCCCGTGGATCATGATCCGGACAGCGAGGGCGACTAC
GACTCGGAGTTTTCCGACGAAGACATGGGACGGATGTCAGGAGACCAGCA
CATGCCCAAGTGGGCCCTGGATCCCTTGCTCACGGAGTCAAGCCCCCTCC
AGTCCGGGCCAAGGGGCGATGGCCACGGCGCCGTCAACAGAGGGGGTCCC
GTGGATCATGATCCGGACAGCGAGGGCGACTACGACTCGGAGTTTTCCGA
CGAAGACATGGGACGGTATTCGGGAATCCGAACGGTGAGGCGGGGCTGTC
TCCTGGACTCGTTGCTCCTGCTCAATGCCGTCACCGTCATTACGGCGCTG
GGGGTGGGGGTTGCACAGGGGCTCGTGTTGGGATACCGCAAGGACTTATC
CCTATTCGGGAATCCGAACGGTGAGGCGGGGCTGTCTCCTGGACTCGTTG
CTCCTGCTCAATGCCGTCACCGTCATTACGGCGCTGGGGGTGGGGGTTGC
ACAGGGGCTCGTGTTGGGATACCGCAAGGACTTATCCCCGGAATCGGTGG
CGGTGCGGTGCTACAACATCTTGTTCTGTCTGCTCATCGTCATGGCGGAG
CTGGAGTGGACGACGACCGTGCGGGAGATGTTCGTGCTTCACTCCTGGAT
TCCGAGAGGCGTCGTGTATTCTTTCGGAATCGGTGGCGGTGCGGTGCTAC
AACATCTTGTTCTGTCTGCTCATCGTCATGGCGGAGCTGGAGTGGACGAC
GACCGTGCGGGAGATGTTCGTGCTTCACTCCTGGATTCCGAGAGGCGTCG
TGTATTCTTTCGTTGGCGTGCTGGTGTTGGAGGAGGAAGATGAAAAAGGG
CTGGACCTCGGAGGGTTCGGCATCTACATCACCGTCATCGCCTGGATCAT
GGTCGGCATAGGGGCCCTCTACTTTCTGCTGCGTTGGCGTGCTGGTGTTG
GAGGAGGAAGATGAAAAAGGGCTGGACCTCGGAGGGTTCGGCATCTACAT
CACCGTCATCGCCTGGATCATGGTCGGCATAGGGGCCCTCTACTTTCTGC
TGGGTATCTGCTGCGTGAAACGAATCCGAGACAAGAAGGCGGCCAGGCAC
AAGACCCTGGTAGCCCACGCGGAGATGCAGGCGGCAATGAGAAGAGATCA
CGACGCCATCGCGTGAGGTATCTGCTGCGTGAAACGAATCCGAGACAAGA
AGGCGGCCAGGCACAAGACCCTGGTAGCCCACGCGGAGATGCAGGCGGCA
ATGAGAAGAGATCACGACGCCATCGCGTGA
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