prot_C-linearis_contig79.15391.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig79.15391.1
Unique Nameprot_C-linearis_contig79.15391.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length230
Homology
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A6H5JBP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP3_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 9.580e-136
Identity = 195/226 (86.28%), Postives = 209/226 (92.48%), Query Frame = 0
Query:    4 DQHMPKWALDPLLTESSPLQSGPRGDGHGAVNRGGPVDHDPDSEGDYDSEFSDEDMGRYSGIRTVRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQAAMRRDHDAIA 229
            D HMPKWALDPLLTESSPLQ+G   +GHGAV+       +PDSE DYDS+FSDEDM RYSG+RTVRRGCLLDSLLLLNA+TVI ALGVGVAQG+VL Y KDLSPESVAVRCYNILFC+LI+MAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFG+YIT++AWIMVGIGALYFLLG+CCVKRIRDKK ARHKTLVAHAEMQAAMRRDHDAIA
Sbjct:    5 DPHMPKWALDPLLTESSPLQTGRGTEGHGAVDGA----DEPDSEADYDSDFSDEDMARYSGVRTVRRGCLLDSLLLLNAITVIAALGVGVAQGMVLAYHKDLSPESVAVRCYNILFCMLIIMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGLYITIVAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA 226          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: D8LMH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH6_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 4.440e-110
Identity = 159/171 (92.98%), Postives = 167/171 (97.66%), Query Frame = 0
Query:   59 MGRYSGIRTVRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQAAMRRDHDAIA 229
            M RYSG+RTVRRGCLLDSLLLLNA+TVI ALGVGVAQG+VLGY KDLSPESVAVRCYNILFC+LI+MAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFG+YIT+IAWIMVGIGALYFLLG+CCVKRIRDKK ARHKTLVAHAEMQAAMRRDHDAIA
Sbjct:    1 MARYSGVRTVRRGCLLDSLLLLNAITVIAALGVGVAQGMVLGYHKDLSPESVAVRCYNILFCMLIIMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGLYITIIAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAHAEMQAAMRRDHDAIA 171          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: W7TYB2_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYB2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.870e-30
Identity = 64/159 (40.25%), Postives = 103/159 (64.78%), Query Frame = 0
Query:   68 VRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQAAMRRDHD 226
            +RRGC L   L +NAV V++AL V VA+ L + Y   LSP  +A+R Y I+F + +V  EL WT  VR+ ++L +WI RG +Y+FVG+L +++E E    +    ++I      ++G+G LYF++G+ C+K +RD++AA +  L + AE++ A+RR  D
Sbjct:  104 IRRGCCLSIFLAINAVCVLSALSVAVAEILSIVYH-GLSPLGIAIRVYGIVFSIGVVFTELGWTQAVRDTWLLQNWISRGAIYTFVGLLSIKQEVEHEARINIVNVFIYCAGLGLIGLGVLYFVMGVFCLKGVRDRRAADYTILKSQAELEEALRRHGD 261          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A4D9D1W9_9STRA (Cryptochrome DASH n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.690e-28
Identity = 64/159 (40.25%), Postives = 102/159 (64.15%), Query Frame = 0
Query:   68 VRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQAAMRRDHD 226
            +RRGC L   L +NAV V++AL V VA+ L + Y   LSP  +A+R Y I+F + +V  EL WT  VR+ ++L +WI RG +Y+FVG+L +++E E    +     +I      ++G+G LYF++G+ C+K +RD++AA +  L + AE++ A+RR  D
Sbjct:  572 IRRGCCLSIFLAINAVCVLSALSVAVAEILSIVYH-GLSPLGIAIRVYGIVFSIGVVFTELGWTQAVRDTWLLQNWISRGAIYTFVGLLSIKQEVEHEARINIVNAFIYCAGLGLIGLGVLYFVMGVFCLKGVRDRRAADYTILKSQAELEEALRRHGD 729          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7R9WMH7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WMH7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.530e-23
Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 0
Query:   69 RRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGL----DLGGFGI---YITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHA-EMQAAMRRDHD 226
            RR C+    +++N +TVI A  + VAQ L + Y K LS     +R Y I  C +IVM ELEWT+ +RE  +L +W+ RG++Y+FVGVL +E+ +        D   F +   +I V++ IMVG+G LYF++GICC++ + +K    ++  VA A +M AA +  +D
Sbjct:   54 RRKCVHKVFVVINGITVIIATLMFVAQLLGI-YFKTLSLVDYVLRVYIIALCAMIVMNELEWTSVIRESRLLRNWLTRGLIYAFVGVLGIEQYEASPSGRHDDSAHFDVAMNFIRVVSNIMVGVGGLYFVMGICCMQLVSNKLRHEYEERVARAGDMHAAAQTYND 218          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7S2KE92_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KE92_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.830e-18
Identity = 54/166 (32.53%), Postives = 95/166 (57.23%), Query Frame = 0
Query:   68 VRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGY--RKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDL-------------GGFGIYITVIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLVAHAEMQ 218
            VR+ CL      +++VT ++AL +G++Q L + +    ++ P  +A+R Y  LFC+ +++AELE    +  M +LHSW+ RG+VYSF+G++ +EE      DL             G   ++I + ++ M  +G LYFL+G  C++R+RD    ++   +  AEM+
Sbjct:  124 VRKSCLHLFFDCVSSVTALSALCMGLSQVLPMFFVDEGEIGPVQMALRVYMTLFCVGVIVAELE-CLLINRMPLLHSWLVRGIVYSFLGIVGMEESVAVKFDLNNDDDSSVPTTREGHASLFIKLSSYAMTALGVLYFLMGCLCMRRLRDNCRTKYNERIKKAEMK 288          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A836CNQ0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ0_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.380e-17
Identity = 48/117 (41.03%), Postives = 71/117 (60.68%), Query Frame = 0
Query:   85 VITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRIR 201
            VI A+GV +A  LVL    +LS    AVR Y I+FC+ I++AELEW + ++   +L  W  RG++Y+FVG+L LE  D     +     YI    WI+VG+G LYF +G+  + ++R
Sbjct:    1 VIVAVGVIIALILVLALSNNLSHVEFAVRVYAIVFCIGIILAELEWPSIMKNAVLLRWWPVRGLLYTFVGLLTLEISDFNDNPVAEAFHYIF--GWILVGVGVLYFFMGLARLHKVR 115          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7S1FP16_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP16_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 5.260e-16
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 0
Query:   78 LLLNAVTVITALGVGVAQGLVLG-YRKDLSPES----------------VAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEK------GLDLGGFGIYIT-----VIAWIMVGIGALYFLLGICCVKRIRDKKAARHKTLV 212
            ++L  VTV +A  +G +Q LV G Y  +   +S                VA++CY ++FCL IV+AELEW   ++   +L  W  RG++YSF+GVL +EE   K      G       ++I      V A ++V  G LYF++G+ C+ +IRDK    +K LV
Sbjct:  239 IVLQVVTVASAAFLGTSQALVTGWYDPNTGDQSTGAEAAPYFWNRDLIEVAIQCYLVVFCLTIVLAELEWPGPIKRSNILQFWPFRGILYSFIGVLGMEESIVKPRTLAEGTTWSSSPVFIAHMALKVSAMVLVVTGCLYFIMGLLCINKIRDKCRQNYKELV 401          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7S4VKT3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VKT3_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.760e-13
Identity = 45/132 (34.09%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   80 LNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEED-----EKGLD--LGGFGI-YITVIAWIMVGIGALYFLLGICCVKRIRDK 203
            +N +T++ A+  G+ Q + + + + + P    +R Y I    L+++ ELE ++      +L+ WI RG+ Y+F+GVL LEE       ++G D  +   GI +I V+AW+MVGIG LYF++G  C++ + +K
Sbjct:   48 INFITIMIAILYGIGQFIGIAFEQ-VGPVQYVLRVYVIALSALVILNELELSSLTTTSKLLNMWITRGLTYAFIGVLGLEENGGVVQVQEGADTEMRDMGILFIKVVAWMMVGIGCLYFVMGCLCLQIVLNK 178          
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Match: A0A7S0AVP1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AVP1_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.920e-13
Identity = 52/171 (30.41%), Postives = 90/171 (52.63%), Query Frame = 0
Query:   49 DYDSEFSDEDMGRYSGIRTVRRGCLLDSLLLLNAVTVITALGVGVAQGLVLGYRKDLSPESVAVRCYNILFCLLIVMAELEWTTT-VREMFVLHSWIPRGVVYSFVGVL--------VLEEE------DEKGLDLGGF-GIYITVIAWIMVGIGALYFLLGICCVKRIRDK 203
            +Y ++  +      SG+   RR C     ++LN + V   L + ++Q L + + K+ +   + +R Y   FCL+ + AE+E     VR    LH++I +G  YSFV +         ++EE       D  G+D   F  +++ + AW+M+G+GALY LLGI C++ +RD+
Sbjct:  133 EYKTKLEERRRKMLSGLP--RRNCCHGLFIILNIIAVAACLLLILSQVLPIFFVKEQTLLQLTLRGYLTFFCLIFIFAEMELPLPFVRSSQSLHNFISKGFNYSFVSICAMTQAEADLIEESIKKRTMDPMGIDFSWFHALFVEIPAWVMLGVGALYMLLGILCMRPVRDR 301          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JBP3_9PHAE9.580e-13686.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMH6_ECTSI4.440e-11092.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TYB2_9STRA1.870e-3040.25Golgi apparatus membrane protein TVP15 n=1 Tax=Nan... [more]
A0A4D9D1W9_9STRA2.690e-2840.25Cryptochrome DASH n=1 Tax=Nannochloropsis salina C... [more]
A0A7R9WMH7_9STRA5.530e-2339.16Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2KE92_9STRA7.830e-1832.53Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A836CNQ0_9STRA3.380e-1741.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S1FP16_9STRA5.260e-1634.97Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4VKT3_9STRA1.760e-1334.09Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0AVP1_9STRA7.920e-1330.41Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PANTHERPTHR28128FAMILY NOT NAMEDcoord: 83..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 198..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..126
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..158
NoneNo IPR availableTMHMMTMhelixcoord: 138..157
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
NoneNo IPR availableTMHMMTMhelixcoord: 109..131
NoneNo IPR availableTMHMMTMhelixcoord: 77..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:145452..148079 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15391.1mRNA_C-linearis_contig79.15391.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig79 144112..149933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig79.15391.1 ID=prot_C-linearis_contig79.15391.1|Name=mRNA_C-linearis_contig79.15391.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=230bp
MSGDQHMPKWALDPLLTESSPLQSGPRGDGHGAVNRGGPVDHDPDSEGDY
DSEFSDEDMGRYSGIRTVRRGCLLDSLLLLNAVTVITALGVGVAQGLVLG
YRKDLSPESVAVRCYNILFCLLIVMAELEWTTTVREMFVLHSWIPRGVVY
SFVGVLVLEEEDEKGLDLGGFGIYITVIAWIMVGIGALYFLLGICCVKRI
RDKKAARHKTLVAHAEMQAAMRRDHDAIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15