mRNA_C-linearis_contig79.15380.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: A0A6H5JEJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ2_9PHAE) HSP 1 Score: 442 bits (1138), Expect = 5.810e-149 Identity = 253/410 (61.71%), Postives = 288/410 (70.24%), Query Frame = 2
Query: 68 MVTNNLTTRSGYHSQSQSGLGLPR--EAISPGLSGRSFHLGTEAAL--EGWVLALVSLLIAWLLASNLALR-RAVNA---KQREPFKRRVPRERTIAAQRWLWMVDLSLRCFWSILSPFSRTFH------------HTRQASLP--PEV----SNDSHLLERRRKFESGVESVKSPASPGAPRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFGC 1219
M TNNLTTRSG + + GL R + SPG + T+ EG L + IA LLASN LR + +N+ ++ + +P T + ++D LR + + F HTRQ LP PE +S LER+R +S + GAPRHVAV+MDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGV + TAFAFSTENWKRDA+EV +LMDLVC+SCGELMEDA KKNMRIRVLASDAT+LPERV +AI+KAED TR CTG L NICLSYGARQE+ANACRQIA EVASG T+LD VDE AVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDIT+ DVL IFEA+KTR+RRFGC
Sbjct: 1 MPTNNLTTRSGMNFPAAVGLWPTRGEDTKSPGNNDNITATATDRHRFREGTFLVV----IACLLASNWRLRHKGINSARPRKTSNGQSELPVRSTAKLSALMLLLDRGLRMAAYVAVQLLKLFSGRIGSWPQKKGLHTRQEGLPEKPETVTLDDGNSPKLERKRPRTECAPGERSLSPIGAPRHVAVIMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVAVATAFAFSTENWKRDAHEVNLLMDLVCTSCGELMEDAGKKNMRIRVLASDATKLPERVLSAIQKAEDATRDCTGFLFNICLSYGARQELANACRQIAQEVASGATSLDLVDEYAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITRRDVLDIFEAFKTRKRRFGC 406
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: W4G700_9STRA (Alkyl transferase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G700_9STRA) HSP 1 Score: 288 bits (738), Expect = 7.540e-90 Identity = 139/246 (56.50%), Postives = 179/246 (72.76%), Query Frame = 2
Query: 503 SVKSPASPGA--------PRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
S S ASP + PRH+AVVMDGNRR+GR KYG P++GH DG +RL +FL W M AGV+++T +AFSTENWKRDA EV LM + S +++ +A +N+R+RVL SDAT LP+ VQ +I++ E T+HC+ LNIC SYG+R EI ACRQIA +VASG N+D V E V +HLLT+ LPDP++L+RTSGE RVSNFL++Q+AY EL FVDKLWP +T +D +GI Y R+RRFG
Sbjct: 86 STSSSASPTSSINPTWIIPRHMAVVMDGNRRYGRSKYGVPMRGHHDGSQRLVDFLSWAMSAGVQILTVYAFSTENWKRDAAEVNALMGIFDSFMMDIIPEALARNIRVRVLVSDATHLPQHVQVSIQEIEAATQHCSAFTLNICASYGSRNEITMACRQIAKKVASGELNVDDVTEDIVSQHLLTRNLPDPEVLVRTSGELRVSNFLMYQIAYAELIFVDKLWPALTHDDFIGILAEYNRRQRRFG 331
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: A0A024UJ77_9STRA (Alkyl transferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ77_9STRA) HSP 1 Score: 280 bits (717), Expect = 2.910e-86 Identity = 130/228 (57.02%), Postives = 173/228 (75.88%), Query Frame = 2
Query: 533 PRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
P+H+AVVMDGNRR+GR KYG P++GH +G +RL +FL W M AGVE++T +AFSTENWKRDA EVK LM + + +++ +A +N+R+ VL SDAT LP+ +Q +IR E T+HC+ LNIC SYG+R EIA ACR+IAV+VA+G + + V E V HLLT+GLPDP++L+RTSGE RVSNFL+FQ+AY EL FVDK+WP +T +D +GI + R+RRFG
Sbjct: 137 PKHMAVVMDGNRRYGRTKYGIPVRGHQEGSQRLVDFLTWAMSAGVEILTVYAFSTENWKRDAAEVKALMGIFDTFMQDIIPEALARNIRVCVLVSDATHLPKYIQASIRDIEAATKHCSAFTLNICASYGSRNEIAVACREIAVKVAAGEMDANQVTEKVVSDHLLTRGLPDPEVLVRTSGELRVSNFLMFQIAYAELIFVDKMWPALTHDDFVGILGEFNRRQRRFG 364
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: A0A836CC83_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC83_9STRA) HSP 1 Score: 273 bits (698), Expect = 1.910e-85 Identity = 123/221 (55.66%), Postives = 167/221 (75.57%), Query Frame = 2
Query: 554 MDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
MDGNRR+G +GDPL+GH+DGGK L +F+EWC++AGV +T FAFSTENW+R+ EV +LMD +C C +DA +N+RIR L + A RLP V A+ AE +T CTG++LNICLSYG R+E+A ACR+IA +V SG ++DE A+ LLT+ + DPD+LIRTSGE+RVSNFLLFQ+AYTELFF++K WP++T++D+ +F+ Y+ R RR+G
Sbjct: 1 MDGNRRYGAAAHGDPLRGHADGGKVLADFVEWCVDAGVAALTVFAFSTENWRRERREVDLLMDTLCEYCDRFRKDAVARNVRIRGLMTSAHRLPPSVLEAVANAERDTAACTGLVLNICLSYGGREELAGACRRIAEDVQSGAMAASSIDEDAIRDRLLTRHVGDPDVLIRTSGERRVSNFLLFQLAYTELFFLEKHWPEVTRDDLSAVFDQYRARRRRYG 221
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: H3HD49_PHYRM (Alkyl transferase n=4 Tax=Phytophthora TaxID=4783 RepID=H3HD49_PHYRM) HSP 1 Score: 273 bits (698), Expect = 5.230e-85 Identity = 122/228 (53.51%), Postives = 172/228 (75.44%), Query Frame = 2
Query: 533 PRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
PRH+AV++DGNRR+G+ KYG +GHSDG K + F +WC++AGVE +T FAFSTENWKR+ E+ LM LV +++ +A +N+R+RVLASD+++LP + +I++ E +T+HC LN+C+SYGAR EI AC++IA EVA G T++D +DE + + +LT GLPDPD+L+RTSGE R+SNFLLFQ+AY EL F+DKLWP++T+ED+ I + R+RRFG
Sbjct: 24 PRHIAVIIDGNRRYGKNKYGSGTRGHSDGTKTVMNFTDWCIDAGVEALTVFAFSTENWKREKAEIDALMKLVDGFIHDILGEALTRNIRVRVLASDSSKLPAFLVKSIKEVETKTQHCNAFHLNLCVSYGARDEIVGACKKIAAEVAGGETSIDDIDEELLSQRMLTAGLPDPDILLRTSGELRISNFLLFQIAYAELIFMDKLWPEVTREDLQDIIVEFNRRKRRFG 251
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: A0A6G0XDS5_9STRA (Alkyl transferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDS5_9STRA) HSP 1 Score: 275 bits (704), Expect = 5.930e-85 Identity = 121/228 (53.07%), Postives = 176/228 (77.19%), Query Frame = 2
Query: 533 PRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
P+HVAV+MDGNRR+GR KYG P+KGH +G +R+ +FL WCMEAGV+++T +AFSTENW RDA EV LM + + +++ +A +++R+ VLASD+ RLP V+ +I+K E+ T++C+ LNIC SYG+R EI NACR IA +VASG + + ++E + R+LLT+ +PDPD+L+RTSGE R+SNFL++Q AY+EL F+DK+WP +T++D +GI + + R+RRFG
Sbjct: 91 PKHVAVIMDGNRRYGRTKYGIPVKGHHEGSQRVVDFLTWCMEAGVQVLTLYAFSTENWNRDAAEVNALMGIFETFMNDIIPEALTRDIRVCVLASDSARLPVHVKESIQKIEEATKNCSSFTLNICASYGSRNEIVNACRGIATQVASGAIHAEEINEDTISRYLLTRNVPDPDVLVRTSGELRLSNFLMYQCAYSELIFLDKMWPAVTRDDFVGILDEFNRRKRRFG 318
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: A0A0P1AT52_PLAHL (Alkyl transferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AT52_PLAHL) HSP 1 Score: 275 bits (704), Expect = 1.630e-84 Identity = 123/228 (53.95%), Postives = 172/228 (75.44%), Query Frame = 2
Query: 533 PRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
PRH+AV+MDGNRR+G++KYG ++GHSDG K L F WC+EAG+ M+T FAFSTENW R+ E+ LM+L E++ +A KK++R+RVL SD ++P + AI + E +TRHC+ LN+C+SYGAR EI NACR+IA+EV++G T++ ++E + + +LT GLPDPD+LIRTSGE R+SNFLLFQ+AY+EL F+DK+WP++ Q+DV I + R+RRFG
Sbjct: 123 PRHIAVIMDGNRRYGKIKYGAGVRGHSDGSKTLVNFTGWCIEAGITMLTVFAFSTENWNREQSEIDALMNLFNEFMHEIVPEALKKSIRVRVLVSDGRKMPPYILKAIEEIETQTRHCSKFSLNLCVSYGARDEIVNACRKIAMEVSNGDTSILDINEDLLSQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFIDKMWPEVVQDDVQNIIVEFNLRKRRFG 350
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: A0A485LDR6_9STRA (Alkyl transferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDR6_9STRA) HSP 1 Score: 273 bits (697), Expect = 5.770e-84 Identity = 122/228 (53.51%), Postives = 171/228 (75.00%), Query Frame = 2
Query: 533 PRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
P+H+AVVMDGNRR GR+KYG P+KGH +G +RL +FL+WCM AGV+++T +AFSTENW R+A EV LM + S +++ +A +++R+ VL SD TRLP V+ +IR E T HCT LNIC SYG+R EI AC++IA +VA+G ++ + + RHLLT+G+PDPD+L+RTSGE R+SNFL+FQ+AY+EL F+DK+WP +T +D +GI + + R+RRFG
Sbjct: 87 PKHMAVVMDGNRRHGRMKYGIPVKGHHEGSQRLVDFLKWCMHAGVDILTVYAFSTENWNREAAEVDALMGIFDSFMKDIIPEALARDIRVCVLVSDGTRLPAHVKDSIRAIEASTAHCTSFTLNICASYGSRNEIVGACQRIATQVAAGTLAVEDISDDVFSRHLLTRGVPDPDVLVRTSGELRLSNFLMFQIAYSELIFLDKMWPALTHDDFVGILDEFNRRKRRFG 314
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: H3GUB2_PHYRM (Alkyl transferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUB2_PHYRM) HSP 1 Score: 273 bits (698), Expect = 1.020e-83 Identity = 124/228 (54.39%), Postives = 169/228 (74.12%), Query Frame = 2
Query: 533 PRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
PRH+AV+MDGNRR+G+ KYG +KGHSDG + L F +WC++AG++ +T FAFSTENW R+ EV LM+L E++ +A K+++R+RVL SD +LP + AI E +T HCT LN+C+SYGAR EI ACR+IA EVA+G T ++ ++E + R +LT GLPDPD+LIRTSGE R+SNFLLFQ+AY+EL F+DK+WP++TQ+DV I + R+RRFG
Sbjct: 116 PRHIAVIMDGNRRYGKTKYGVGVKGHSDGSRTLVNFTDWCIDAGIKALTVFAFSTENWNREQSEVDALMNLFNQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVQAIEDIETKTHHCTKFSLNLCVSYGARDEIVGACRKIATEVANGETTVEEINEDLLSRRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFLDKMWPEVTQDDVQDIVFEFNRRKRRFG 343
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Match: W2PTH8_PHYPN (Alkyl transferase n=10 Tax=Phytophthora TaxID=4783 RepID=W2PTH8_PHYPN) HSP 1 Score: 270 bits (689), Expect = 2.620e-82 Identity = 120/228 (52.63%), Postives = 171/228 (75.00%), Query Frame = 2
Query: 533 PRHVAVVMDGNRRFGRVKYGDPLKGHSDGGKRLGEFLEWCMEAGVEMVTAFAFSTENWKRDAYEVKMLMDLVCSSCGELMEDAAKKNMRIRVLASDATRLPERVQTAIRKAEDETRHCTGVLLNICLSYGARQEIANACRQIAVEVASGVTNLDTVDESAVERHLLTKGLPDPDLLIRTSGEKRVSNFLLFQMAYTELFFVDKLWPDITQEDVLGIFEAYKTRERRFG 1216
PRH+AV+MDGNRR+G+ KYG ++GH+DG K L F +WC++AG++ +T FAFSTENW R+ EV LM+L E++ +A K+++R+RVL SD +LP + AI + E +T++C+ LN+C+SYGAR EI ACR+IA EV G T+++ ++E V + +LT GLPDPD+LIRTSGE R+SNFLLFQ+AY+EL F+DK+WP++T++DV GI + R+RRFG
Sbjct: 121 PRHIAVIMDGNRRYGKTKYGAGVRGHTDGSKTLVNFTDWCIDAGIQALTVFAFSTENWNREQSEVDALMNLFSQFMHEIVPEALKRDVRVRVLVSDGRKLPAYIVEAIEEIETKTQNCSKFSLNLCVSYGARDEIVGACRKIATEVVRGETSVEDINEDLVSQRMLTAGLPDPDILIRTSGELRISNFLLFQIAYSELIFMDKMWPEVTKDDVEGIIMEFNRRKRRFG 348 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig79.15380.1 >prot_C-linearis_contig79.15380.1 ID=prot_C-linearis_contig79.15380.1|Name=mRNA_C-linearis_contig79.15380.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=385bp MVTNNLTTRSGYHSQSQSGLGLPREAISPGLSGRSFHLGTEAALEGWVLAback to top mRNA from alignment at C-linearis_contig79:39562..46275- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig79.15380.1 ID=mRNA_C-linearis_contig79.15380.1|Name=mRNA_C-linearis_contig79.15380.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6714bp|location=Sequence derived from alignment at C-linearis_contig79:39562..46275- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig79:39562..46275- >mRNA_C-linearis_contig79.15380.1 ID=mRNA_C-linearis_contig79.15380.1|Name=mRNA_C-linearis_contig79.15380.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2310bp|location=Sequence derived from alignment at C-linearis_contig79:39562..46275- (Chordaria linearis ClinC8C monoicous)back to top |