prot_C-linearis_contig78.15367.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15367.1
Unique Nameprot_C-linearis_contig78.15367.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length996
Homology
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BLAST of mRNA_C-linearis_contig78.15367.1 vs. uniprot
Match: D7G8U4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8U4_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 1.490e-77
Identity = 299/586 (51.02%), Postives = 348/586 (59.39%), Query Frame = 0 
Query:   28 EDAAARRERQIGADVLELYCRFRAKDEPDMPQKIWIELLEKTIPKLKRRRHLKQVHEATRLSFVMMLVGSRRDPPVASRAIAAMLVDHWCDEGPCSFLQKDAIRHATVACVNLSEVPDKDSIARQLKVGIREALGGVGVDGLGVFRRRWSKDRDVLFAGGAGSVLREVDKLVRECRLARTGSDARQTLKGYIRDKKMDTFEVDFMNWARAQLEKLPATFVDHALSTSPTAAPSPTIAKKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKSKNHLYAAAPAPNNVSAAGRQEESCLSGVAMVGTAPRALRVAAVSTPNGQASGSDSGXXXXXXXGSPEAGSKAKPLLVLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGSSFSLTSDEEKDVDCLPSAAKRXXXXXXXXXXXXXXXXXX------AARPRQRRGAGKRNQGELFEGDQVILVVKFFGQPTKWIPGVITCNRKDGTYDVFLANGEAARVVRRVDLYLRQRMSGGARNRXXXXXXXVEEGARPDGCPAAVFSSATV 607
            E AA+  E  + A+VLE Y RFR+K E D   K W+ELLE T+PKL+RRR L ++ +ATRL +VMMLVG+ RDPP+ASRAIAAMLVDHWCD+GPC+FLQKDAIRHATV     SE  DK+SIA+QL+ G+ +AL G G++GLGVF   W +DRDVL  GGA S+  E+  + + CR A    DA   L+ Y  +++M TFE DFM W R QL+KLPAT  D A  T+ +A PS   AK  XXXXXXXXX                                 XXXXX                         +   +S        P   R A  S  +G  S + +G           +G+  +PL + DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         XXXXXXXXXX              AARPR RR AGKRNQ EL EGDQVIL  K FG+PT W+PGV+TCNRKDGTYDVFLA GE AR+VRRV+L+ R    GGAR             ARPDGCP AVF SA V
Sbjct:   25 EAAASPVEDTVAANVLEHYIRFRSKAE-DASFKGWLELLELTMPKLERRRGLLEIDKATRLCYVMMLVGTGRDPPLASRAIAAMLVDHWCDKGPCAFLQKDAIRHATVVDGEYSEGLDKESIAQQLESGVEDALDGTGLEGLGVFAD-WRRDRDVLCPGGAASLREEIMGVAQRCRDAPNDLDALSILEEYTEERRMGTFEDDFMAWGRVQLKKLPATLFDRAGFTT-SAPPSTPDAKXXXXXXXXXXXASGSRVDGSSGRRGRGKGTPVRDRSRAARRVITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPDSPRVS--------PATSRRALGSDDHGSGSKATAGSGASVAV----SGAMEQPLSLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEKEAAKVVAAMEAARPRPRR-AGKRNQWELVEGDQVILEAKEFGRPTTWVPGVVTCNRKDGTYDVFLAGGEVARLVRRVELHYRHG-GGGAR-----AGARSSTEARPDGCPDAVFGSADV 588
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8U4_ECTSI1.490e-7751.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 661..699

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:623535..640729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15367.1mRNA_C-linearis_contig78.15367.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 623466..640934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15367.1 ID=prot_C-linearis_contig78.15367.1|Name=mRNA_C-linearis_contig78.15367.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=996bp
MASLEREPVAEIELLGGEGFGPQQQAGEDAAARRERQIGADVLELYCRFR
AKDEPDMPQKIWIELLEKTIPKLKRRRHLKQVHEATRLSFVMMLVGSRRD
PPVASRAIAAMLVDHWCDEGPCSFLQKDAIRHATVACVNLSEVPDKDSIA
RQLKVGIREALGGVGVDGLGVFRRRWSKDRDVLFAGGAGSVLREVDKLVR
ECRLARTGSDARQTLKGYIRDKKMDTFEVDFMNWARAQLEKLPATFVDHA
LSTSPTAAPSPTIAKKNSAAAGASGGAGSRSGGASTTRGGDGVASSAVRP
SSSNGGGGGGGSRSSPAKSKNHLYAAAPAPNNVSAAGRQEESCLSGVAMV
GTAPRALRVAAVSTPNGQASGSDSGSGSSAGAGSPEAGSKAKPLLVLDDD
DEGDDAVNGGQSFSGNNSPPDSEEEEEEEEEENSSRVRRPGTITEEEEEK
DDDDPGEGSSFSLTSDEEKDVDCLPSAAKRHKSEQRRRRRERGAAEPPAA
RPRQRRGAGKRNQGELFEGDQVILVVKFFGQPTKWIPGVITCNRKDGTYD
VFLANGEAARVVRRVDLYLRQRMSGGARNRGGGGGGAVEEGARPDGCPAA
VFSSATVHAPLRRRVGRRCVNGGGEQQQRPQQQQQEQQGGGGSKAAVKHR
EVAEEKRDDRSREETDDADRWQEERSEEEEEEEEEEEEEEEDEDEDHDEG
SGIVSTRRTRRSPHGGSGGGSGSGGRRRAAPMAASEVEDETASSGDEGSG
SSVIHIEKGNPGTPSRCKKPAAPPDHRSRSGSGGKTKGKGPARIKNPGRR
RRESESSPGSAGSSAVAAAGAAAAATNGSRDSAASLARPRRYASRAAATG
ALSYADVSDDEEEGEEGGDEDFDETLKRSGGGGGGGGQEKSKRAAPEGNA
TRRGGNDAGSAAVPADASGGGRGGGGGEAGGGANADGNVGAPGGRAGNAP
SALEIAAHLEDAGGWKGGGFSDSSSSSSDSDGAPRSRRPKRKSRR*
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