prot_C-linearis_contig76.15250.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15250.1
Unique Nameprot_C-linearis_contig76.15250.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length548
Homology
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BLAST of mRNA_C-linearis_contig76.15250.1 vs. uniprot
Match: D7FQQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ0_ECTSI)

HSP 1 Score: 507 bits (1305), Expect = 2.890e-175
Identity = 243/334 (72.75%), Postives = 272/334 (81.44%), Query Frame = 0 
Query:    1 QEHFEQFPQENGSIFLFNAYTGEAIYDVDRWGSPLPDARKLSHWFEPTAIVPPQPNEDSSPGRVDISNLRDLRDKLPGNKFRARWHCAEMIQRNVRAALSRWRVARGLWGAWIKEYDHEAERYSFTHKSTGEQQYHKPWGMDTVDLWALPGDKADENLVSLFLRVEGATAEEGADEEPRDWEASRRYRRRLYKFYREKNFSKGPHCRIVGPGSLKESCFTNVFLYPKKYYKTKPFSHPRDRQFEGARMGTYVACMDGLVEKR-------------------------ITADAYFHVRNASEHGALSMLKRMLKYRDDLHVQGIGLQRMAGSLLE 309
            Q++F++FPQENGSIFLFN YTGEAIYDVDRWGSPLP AR LSHWF PTA+VPP    +     VD  NLRDLRD  PG+++RARWHCAE+IQRNVRAALSRWRVAR L   W+K+YDHEAER+SFTH++  E QYHKPWGM TVDLWA+PG+K DE+LVSLFLRVE ATAEE  DEEPRDWEAS+R+RRRLYKFY+EK FS+GPHCRIVGPGSLKES FTNVFLYPKKYYKTKPFSHPRDRQ EGARMG+ V CMDGLVEKR                         I+ADAYFHVRNASEHGAL+++K M K+RDDL VQG+GLQRMAGSLLE
Sbjct:   11 QDYFDRFPQENGSIFLFNTYTGEAIYDVDRWGSPLPGARTLSHWFVPTAVVPPATEGEP----VDTHNLRDLRDDFPGSEYRARWHCAELIQRNVRAALSRWRVARALCAVWVKDYDHEAERFSFTHQNNREMQYHKPWGMGTVDLWAVPGEKVDEHLVSLFLRVESATAEERTDEEPRDWEASKRHRRRLYKFYQEKKFSEGPHCRIVGPGSLKESSFTNVFLYPKKYYKTKPFSHPRDRQCEGARMGSQVTCMDGLVEKRTTSTENRNRKDASHGQAPYGEKGQLISADAYFHVRNASEHGALNVIKLMFKHRDDLRVQGVGLQRMAGSLLE 340
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQQ0_ECTSI2.890e-17572.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 261..510
e-value: 1.5E-11
score: 46.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 282..508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:956075..961678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15250.1mRNA_C-linearis_contig76.15250.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 956075..961678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15250.1 ID=prot_C-linearis_contig76.15250.1|Name=mRNA_C-linearis_contig76.15250.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=548bp
QEHFEQFPQENGSIFLFNAYTGEAIYDVDRWGSPLPDARKLSHWFEPTAI
VPPQPNEDSSPGRVDISNLRDLRDKLPGNKFRARWHCAEMIQRNVRAALS
RWRVARGLWGAWIKEYDHEAERYSFTHKSTGEQQYHKPWGMDTVDLWALP
GDKADENLVSLFLRVEGATAEEGADEEPRDWEASRRYRRRLYKFYREKNF
SKGPHCRIVGPGSLKESCFTNVFLYPKKYYKTKPFSHPRDRQFEGARMGT
YVACMDGLVEKRITADAYFHVRNASEHGALSMLKRMLKYRDDLHVQGIGL
QRMAGSLLEEDEAGGATEGQKKYLEKALQLLRETPNIEWIQAEACAALAS
MTSGLCIRKEIEREHPDWLEDVVTAMTGVKIIPKTVKEIDSDGKETRYDV
TEPSPMAHLVALHACRILANMACDEHSRAEVARGSIGAVVHVAKLMADDP
VLVCTVSAAVYNFVSRQETTHQIVVEAGTVEVLEGMLDHLDHTDRKEKEL
VERALTALEPDGWRGVDYGLRDEDIPEHVDESSRSLDESSGIESSVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold