prot_C-linearis_contig76.15235.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15235.1
Unique Nameprot_C-linearis_contig76.15235.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length494
Homology
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: D7FQR5_ECTSI (FAD binding / catalytic/ tRNA dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR5_ECTSI)

HSP 1 Score: 758 bits (1957), Expect = 3.040e-273
Identity = 392/498 (78.71%), Postives = 416/498 (83.53%), Query Frame = 0
Query:    1 MINLKSMSLSALAVIQATRAFSLNAASVSATRYRYGHLAPRTRCRHTAPRRT-----KDGDAKQQDTRMEAGASPDSPSPVLGRGREVFSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYWSQADSKLFGTKDPGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFGEIVQKSLLAMPQDQVDWLPGENWRSRQVEGEEQAGRADSLAQDEDPGCVSXXXXXXXXXXXXXXXXXXXXXXSSARGVPDGRFRDGRLLYINE 493
            M+ LKSMSLSAL V+ + RAF L   S      ++  L  R RCRHTA          DG    + TRMEAGA+PDSP   LGRGREVFSLAPMMEYTDRHMRYLLRLL+TRTVLWTEMVP+ TI HN DDLGRFL YNEEVEHPVVLQIGGSDT DVREACRLARPY YDAINLNCGCPS+KVAGKGAFGAALMRSPSLVKDLCLAM+DGAGE TPITVKCRIGVD DDSYEQ+AAFVEEVSRGAGV HFI+HARKAILGGLSPAQNRNIPPLKYD+VYRLV+DFPDVDFTLNGGVNTYEEA+SCLEQGAHGVMVGRSWSSNPWYWSQADS LFG KDPGLTRREVLERYAEYGERQEK  G+ WLACRRRLAKPIWH+FHGEKGGKKFRVALE MLREDKSFGEIVQKSLLAMPQDQVDWLPGENWR+RQ E  E AG+ +SLAQD  PGCVS                       S+RGVPDGRFRDGRLLYI++
Sbjct:    1 MMKLKSMSLSALVVVHSARAFPLAIPS------QHQGLRAR-RCRHTAAAPPVDHWETDGKKHGRRTRMEAGAAPDSPPSALGRGREVFSLAPMMEYTDRHMRYLLRLLTTRTVLWTEMVPSSTIIHNPDDLGRFLDYNEEVEHPVVLQIGGSDTTDVREACRLARPYKYDAINLNCGCPSEKVAGKGAFGAALMRSPSLVKDLCLAMKDGAGEDTPITVKCRIGVDNDDSYEQLAAFVEEVSRGAGVPHFIVHARKAILGGLSPAQNRNIPPLKYDFVYRLVKDFPDVDFTLNGGVNTYEEAVSCLEQGAHGVMVGRSWSSNPWYWSQADSMLFGAKDPGLTRREVLERYAEYGERQEKACGEKWLACRRRLAKPIWHMFHGEKGGKKFRVALEGMLREDKSFGEIVQKSLLAMPQDQVDWLPGENWRARQAE--EGAGQGESLAQD--PGCVSSLPSP------------------SSRGVPDGRFRDGRLLYIDK 469          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: A0A836CCW1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCW1_9STRA)

HSP 1 Score: 442 bits (1138), Expect = 2.170e-150
Identity = 212/344 (61.63%), Postives = 256/344 (74.42%), Query Frame = 0
Query:   77 LGRGREVFSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYWSQADSKLFGTKDPGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFGEIVQKSLLAMPQDQVDWLPG 420
            L R  +  SLAPMMEYTDRHMRY+LRL + + V+WTEM+P  +I HN DDL R L Y++  EHPVVLQ+GGSD + VR AC LARPY YD INLN GCPS++VAGKGAFGAALMR P LV D+C AMR+G+G G   +VKCRIGVD++DSY  +A FV+ V+RG GV+ FI+HARKAIL GLSP QNR +PPLKYDYVYRLVRDFP++ FTLNGGV TY      L+ GAHGVMVGR+    PWYWSQ+DS++FG  D  L RR+VL+ Y EY E  E   G  WL  RRRL KP+W+LFHGE GGKKFR  L+ M+ +++ F  I+  +L  +P D VD  PG
Sbjct:    3 LSRHDQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSG-GAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPG 345          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: A0A4D9D156_9STRA (tRNA-dihydrouridine synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D156_9STRA)

HSP 1 Score: 387 bits (994), Expect = 1.580e-128
Identity = 192/342 (56.14%), Postives = 245/342 (71.64%), Query Frame = 0
Query:   82 EVFSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYWSQADSKLFGTKD--PGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDK-SFGEIVQKSLLAMPQDQVDWLPG 420
            E  SLAPMMEYTDRH+R+LLRLLS R VL+TEM+ A T+ HN +   RFL +N   EHPVVLQ+GGSD   + EA RLA PY Y+A+NLNCGCPS++V+GKG FGAALMR P  V +LC AM +G+    P+TVKCRIGVD+DDSYEQ+A FVE VS  + V HF++HARKAILGGLSP QNR +PPLKY +VYRL R+FP + FTLNGGV +YE+    L +G HGVM+GR+  + P+YWS  D+++FG+ D  PGLTRREVL+RY  Y + +E   G      RR L KP+ +LF GE  GK+FR  L+  L E      ++++++   MP   ++ LPG
Sbjct:   23 ERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPGQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSRGKIPVTVKCRIGVDDDDSYEQLAHFVETVSGASPVRHFLVHARKAILGGLSPDQNRRVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGPR---MRRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVLPG 361          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: A0A7S3USD9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USD9_HETAK)

HSP 1 Score: 371 bits (953), Expect = 1.410e-121
Identity = 184/342 (53.80%), Postives = 243/342 (71.05%), Query Frame = 0
Query:   81 REVFSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTI-NHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYWSQADSKLFGTKDPGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFGEIVQKSLLAMPQDQVDWLPGE 421
            +E+FSLAPMM+YTDRHMR+L+RLLS   VL+TEM+ + TI N+  ++LGR+L Y+E  EHPVVLQ+GGSD  ++R A   A PY YDA+NLNCGCPS+KVAGKG FGAALMR   LV DLC  M   A    P+TVK RIGVD++DSYE +  F+E V+  + V HFI+HAR AILGGLSPAQNR IPPLKYDYVY LV+D+P+  FT+NGG+  YEE    L +G HGVMVGR+ +++P+ WSQ D  ++G  +PGLTRRE+LERY EY +   + +G      R+ L K I + F G++ GKKFR A++ ++R +    ++   +   +  + +D  PGE
Sbjct:   49 KELFSLAPMMDYTDRHMRFLMRLLSKDMVLYTEMIASGTIVNNPENELGRWLDYSESCEHPVVLQLGGSDPGELRRAAARAAPYRYDAVNLNCGCPSEKVAGKGCFGAALMREAELVGDLCRGM--AAELDCPVTVKSRIGVDDEDSYEGLCNFIETVADRSPVRHFIVHARTAILGGLSPAQNRQIPPLKYDYVYNLVKDYPEFQFTINGGITEYEEIREHLGRGVHGVMVGRAINADPYKWSQVDELVYGAANPGLTRREILERYGEYCDEMVELWGPR---VRQTLKKHILNFFVGQRNGKKFRCAMDKLVRTELPLSKVFSNAAEILTDETLDAKPGE 385          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: A0A7S2C7I3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I3_9STRA)

HSP 1 Score: 348 bits (894), Expect = 1.230e-112
Identity = 198/387 (51.16%), Postives = 255/387 (65.89%), Query Frame = 0
Query:   60 QDTRMEAGASP---DSPSPVLGRGREVFSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYWSQADSKLFGTKDPGL-TRREVLERYAEYGERQ--EKTYGDNWLACR--RRLAKPIWHLFHGEKGGKKFRVALESMLRED-KSFGEIVQKSLLAMPQDQVDWLPGENWRSRQVEGEEQAGRA 437
            QD   E G  P   ++  PV       FS+APMM+YTDRH RYLLRLLS++ VL+TEMV A T+ HN  D+ R+L  +++VE+PVVLQ+GGSD +D+R + + A  YNYD INLNCGCPSDKVAGKG+FGA LM     V  LC AM    G+  PITVKCRIGVD+ DSYEQ+A FV  VS+  GV HFI+HARKAILGGLSP +NR IPP+KYD+VY+LV DFP + F++NG V TYE+    L +G HGVMVGRS    PW WS+ DS+++G     + +RR+VLE YA+Y E++       D   A R  R + +   +LF GE  G+KFRV L+  L    +S  EI+Q +  A+  + +D  PG   + R   GE  + RA
Sbjct:   52 QDADSELGTRPVHVNNHGPVSDHA---FSVAPMMDYTDRHFRYLLRLLSSKAVLYTEMVGASTLVHN-PDIDRWLRLSDDVENPVVLQLGGSDCEDLRTSVKRASAYNYDEINLNCGCPSDKVAGKGSFGATLMLDAKRVGQLCDAMAQECGK--PITVKCRIGVDDQDSYEQLAEFVGTVSQTGGVEHFIVHARKAILGGLSPEENRRIPPIKYDHVYQLVADFPSLRFSMNGEVKTYEDVSEHLSRGLHGVMVGRSVIEQPWLWSEVDSRIYGLASDNVPSRRKVLEAYADYAEQEISRMLIKDPKYAPRLKRAILRHTANLFRGEPNGRKFRVVLDQQLNTPGRSPHEILQTASGALFPETLDAGPG--MKIRDAFGESISARA 430          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: A0A087H051_ARAAL (Dus domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087H051_ARAAL)

HSP 1 Score: 324 bits (831), Expect = 1.390e-103
Identity = 162/335 (48.36%), Postives = 227/335 (67.76%), Query Frame = 0
Query:   83 VFSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYW-SQADSKLFGTKDPGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFGEIVQKSLLAMPQDQVD 416
            +FS+APMME+TD H R L RL+S    L+TEM+ A T+ H   +L RFL ++   +HP+VLQIGGS+ +++  A +L+  Y YD INLNCGCPS KVAG G FG +LM +P LV +   A+   A    P+TVKCRIGVD+ DSY+++  FV +VS  +   HFI+H+RKA+LGG+SPA NR IPPLKY+Y Y LVRDFPD+ FT+NGG+ +  E  + L++GAHGVM+GR+  +NPW      D+ ++G    GLTRR+VLE+Y EYG+    T+G N     R + KP+ +LFH E G   ++   ++  RE K+ G ++++SL A+P   +D
Sbjct:   34 LFSVAPMMEWTDNHYRTLARLISKHAWLYTEMIAAETLVHQQTNLDRFLAFSPH-QHPIVLQIGGSNVQNLANAAKLSVAYGYDEINLNCGCPSPKVAGHGCFGVSLMLNPKLVGEAMSAI--AANTNVPVTVKCRIGVDDHDSYDELCDFVHKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSVSEVNAALKEGAHGVMIGRAAYNNPWQTLGHVDTTVYGVPSSGLTRRQVLEQYQEYGDSVLGTHG-NGRPNVRDIVKPLLNLFHSENGNSLWKRRADAAFRECKTVGSLLEESLKAIPDCVLD 364          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: V4ME53_EUTSA (Dus domain-containing protein n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4ME53_EUTSA)

HSP 1 Score: 322 bits (826), Expect = 1.180e-102
Identity = 162/335 (48.36%), Postives = 226/335 (67.46%), Query Frame = 0
Query:   83 VFSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYW-SQADSKLFGTKDPGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFGEIVQKSLLAMPQDQVD 416
            +FS+APMME+TD H R L RL++    L+TEM+ A TI H  ++L +FL ++ + +HP+VLQIGGS+ + + +A +LA  Y YD INLNCGCPS KVAG G FG +LM +P LV D   A+ D      P+TVKCRIGVD+ DSY+++  FV +VS  +   HFI+H+RKA+LGG+SPA NR IPPLKY+Y Y LVRDFPD+ FT+NGG+ +     + L++GAHGVMVGR+  +NPW      D+ ++G    GLTRR+VLE+Y  YG+    T G N     R L KP+ ++FH E G   ++   ++  RE K+ G ++++SL A+P   +D
Sbjct:   46 LFSIAPMMEWTDNHYRTLARLITKHAWLYTEMIAAQTIVHQQNNLDKFLAFSPQ-QHPIVLQIGGSNVESLTKAAKLADAYGYDEINLNCGCPSPKVAGHGCFGVSLMLNPKLVGDAMSAIADNTN--VPVTVKCRIGVDDHDSYDELCDFVYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSISMVNASLKEGAHGVMVGRAAYNNPWQTLGHVDTAVYGVPSSGLTRRQVLEQYQVYGDAILGTQG-NGRPNVRDLVKPLLNIFHSENGNSLWKRRADAAFRECKTVGSLLEESLKAIPDSVLD 376          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: UPI000CD56512 (uncharacterized protein LOC17887512 isoform X1 n=6 Tax=Camelineae TaxID=980083 RepID=UPI000CD56512)

HSP 1 Score: 322 bits (824), Expect = 1.950e-102
Identity = 160/334 (47.90%), Postives = 227/334 (67.96%), Query Frame = 0
Query:   84 FSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYW-SQADSKLFGTKDPGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFGEIVQKSLLAMPQDQVD 416
            FS+APMM++TD H R L RL+S    L+TEM+ A T+ H   +L RFL ++ + +HP+VLQ+GGS+ +++ +A +L+  Y YD INLNCGCPS KVAG G FG +LM  P LV +   A+   A    P+TVKCRIGVD+ DSY+++  FV +VS  +   HFIIH+RKA+LGG+SPA NR IPPLKY+Y Y LVRDFPD+ FT+NGG+ +  +  + L++GAHGVMVGR+  +NPW      D+ ++G    GLTRR+VLE+Y  YG+    T+G N     R L KP+ +LFH E G   ++   ++  +E +S G ++++SL+A+P   +D
Sbjct:   42 FSVAPMMDWTDNHYRTLARLISKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQ-QHPIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSAI--AANTSVPVTVKCRIGVDDHDSYDELCDFVYKVSTLSPTRHFIIHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLGFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQMLGPVDTAVYGVPSSGLTRRQVLEQYQVYGDSVLGTHG-NGRPNVRDLVKPLLNLFHSETGNSMWKRRADAAFKECRSVGSLLEESLMAIPDSVLD 371          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: A9U5E7_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U5E7_PHYPA)

HSP 1 Score: 320 bits (819), Expect = 9.390e-102
Identity = 164/337 (48.66%), Postives = 225/337 (66.77%), Query Frame = 0
Query:   84 FSLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWYW-SQADSKLFGTKDPGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFGEIVQKSLLAMPQDQVDWLP 419
            FS+APMM++TD H R L RL+S    L+TEMV A TI H  D+L +FL +NE V+HP+VLQ+GGSD + + +A  LA  Y YD INLNCGCPS+KVAG G FGA+LM    LV +   A+ +G+  GTP+TVKCRIGVD+ DSY+ +  FV  VS  +   HF++HARKAIL GLSPA NR IPPLKY+YVY L+RDFP++ FTLNGGV    +    L++G  GVM+GR+  + PW      D+ ++G   P LTRR++LE+Y EY + +   YG    + R  L KP+  +FH E G   +R A+++ LR  ++ G +++++L  +P   +D  P
Sbjct:   26 FSVAPMMDWTDNHYRTLARLMSKHAWLYTEMVVADTIIHQQDNLDKFLKFNE-VQHPIVLQLGGSDPEKLLKASLLASVYEYDEINLNCGCPSEKVAGHGCFGASLMLESGLVAECMAAIAEGS-PGTPVTVKCRIGVDDFDSYDLLHKFVTTVSSSSPTQHFVVHARKAILKGLSPAANRTIPPLKYEYVYALIRDFPNLKFTLNGGVVNTHQVNEALQEGVFGVMLGRAAYNYPWATLGNVDNSVYGDSTPRLTRRQILEKYVEYADAELHKYGPKKPSVRH-LVKPLLGIFHAESGAGVWRRAVDNSLRNAETVGALLKETLCVLPDFVLDSPP 359          
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Match: A0A388LYQ5_CHABU (Dus domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LYQ5_CHABU)

HSP 1 Score: 328 bits (841), Expect = 1.070e-101
Identity = 169/336 (50.30%), Postives = 224/336 (66.67%), Query Frame = 0
Query:   85 SLAPMMEYTDRHMRYLLRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDTKDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLCLAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHARKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALSCLEQGAHGVMVGRSWSSNPWY-WSQADSKLFGTKDPGLTRREVLERYAEYGERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFGEIVQKSLLAMPQDQVDWLP 419
            S+APMME+TD H R + R++S +T L+TEMV   T+ H  DDL RFL Y +  + P+VLQ+GGSD   + +A  LA  Y YD INLNCGCPS KVAG G FGA LM +P +V D   AM        PITVKCRIGVD +DS+E++  FVE VS  A + HFIIHARKA+L GL+P+QNR++PPLKYDYV+ L++ FP + FT+NGG+ T +EA   LE G HGVM+GR+  ++PW     AD  +FG  +PG+TRR+VLERY EY E    T   N+ + R  L +P+ +LFH EKG  ++R A+E  L     F E+VQ++ + +    +D  P
Sbjct:  321 SVAPMMEWTDNHYREMARMISQKTWLYTEMVVDATVIHRQDDLDRFLAYPKG-QKPIVLQLGGSDPAMLAQAATLAEAYGYDEINLNCGCPSTKVAGHGCFGARLMLTPDVVGDAVAAMSKACS--VPITVKCRIGVDNNDSFEELCTFVESVSTRAPIKHFIIHARKALLKGLTPSQNRSVPPLKYDYVFGLIKAFPSLHFTINGGILTCQEARKMLELGVHGVMIGRAAYNHPWLVLGDADRCIFGVDNPGVTRRKVLERYTEYAESAIGTQSPNYPSVRS-LIRPVQNLFHAEKGAARWRRAIEEGLTARLGFRELVQRASMELADKVLDSPP 652          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQR5_ECTSI3.040e-27378.71FAD binding / catalytic/ tRNA dihydrouridine synth... [more]
A0A836CCW1_9STRA2.170e-15061.63tRNA-dihydrouridine synthase n=1 Tax=Tribonema min... [more]
A0A4D9D156_9STRA1.580e-12856.14tRNA-dihydrouridine synthase n=3 Tax=Monodopsidace... [more]
A0A7S3USD9_HETAK1.410e-12153.80Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S2C7I3_9STRA1.230e-11251.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A087H051_ARAAL1.390e-10348.36Dus domain-containing protein n=1 Tax=Arabis alpin... [more]
V4ME53_EUTSA1.180e-10248.36Dus domain-containing protein n=2 Tax=Eutrema sals... [more]
UPI000CD565121.950e-10247.90uncharacterized protein LOC17887512 isoform X1 n=6... [more]
A9U5E7_PHYPA9.390e-10248.66Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A388LYQ5_CHABU1.070e-10150.30Dus domain-containing protein n=1 Tax=Chara brauni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 81..330
e-value: 6.1E-69
score: 234.1
IPR001269tRNA-dihydrouridine synthasePFAMPF01207Duscoord: 86..397
e-value: 2.9E-59
score: 200.7
IPR004653tRNA-dihydrouridine(20/20a) synthasePANTHERPTHR42907FAMILY NOT NAMEDcoord: 78..418
IPR018517tRNA-dihydrouridine synthase, conserved sitePROSITEPS01136UPF0034coord: 168..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..493
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.475
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 84..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:841367..845795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15235.1mRNA_C-linearis_contig76.15235.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 840856..845842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15235.1 ID=prot_C-linearis_contig76.15235.1|Name=mRNA_C-linearis_contig76.15235.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=494bp
MINLKSMSLSALAVIQATRAFSLNAASVSATRYRYGHLAPRTRCRHTAPR
RTKDGDAKQQDTRMEAGASPDSPSPVLGRGREVFSLAPMMEYTDRHMRYL
LRLLSTRTVLWTEMVPALTINHNHDDLGRFLTYNEEVEHPVVLQIGGSDT
KDVREACRLARPYNYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKDLC
LAMRDGAGEGTPITVKCRIGVDEDDSYEQVAAFVEEVSRGAGVNHFIIHA
RKAILGGLSPAQNRNIPPLKYDYVYRLVRDFPDVDFTLNGGVNTYEEALS
CLEQGAHGVMVGRSWSSNPWYWSQADSKLFGTKDPGLTRREVLERYAEYG
ERQEKTYGDNWLACRRRLAKPIWHLFHGEKGGKKFRVALESMLREDKSFG
EIVQKSLLAMPQDQVDWLPGENWRSRQVEGEEQAGRADSLAQDEDPGCVS
SLSSSSPSSSPSSLSSSPPSPSSSARGVPDGRFRDGRLLYINE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR001269tRNA_hU_synthase
IPR004653DusA
IPR018517tRNA_hU_synthase_CS