prot_C-linearis_contig76.15168.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15168.1
Unique Nameprot_C-linearis_contig76.15168.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length122
Homology
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 5.550e-67
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 0
Query:    1 MESTTSSVFNGRSLGALGLERTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAIKLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVTG 122
            MESTTSSVFNGRSLGALGL RTLVGRYKKSSQMAARL Q+CGIL ME LSVMQDVETRWWSTWAM+VRLLYL KAIKLH+SMD+VH LLSDTDWEVLRLIEPIL+PFMKAQKDLEGAQYVTG
Sbjct:  141 MESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTG 262          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 4.070e-52
Identity = 90/122 (73.77%), Postives = 106/122 (86.89%), Query Frame = 0
Query:    1 MESTTSSVFNGRSLGALGLERTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAIKLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVTG 122
            MESTTSSVFNG+SLGAL   R +VGRYK+SSQM+ RL+   GIL +  LSV+QDVETRWWS+WAMI RLLYL KAIKLH+S D++  +LS+TDWEVLRLIEPIL+PFM+AQKDLEGA+YVTG
Sbjct:  177 MESTTSSVFNGKSLGALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTG 298          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.200e-26
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 0
Query:    1 MESTTSSVFNGRSLG-ALGLERTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAIKLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVT 121
            +ES TS  F G  +  AL L R +V RY  SSQ + RL Q+C I+ +E  +V+QDVETRWWST+  I RL+ LR+ I  H+ +D    LL + DWEVL+L+E +L+PFM AQK LE ++ VT
Sbjct:  105 LESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVT 226          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.060e-25
Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 0
Query:    1 MESTTSSVFNGRSLG-ALGLERTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAIKLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVT 121
            +ES TS  F G  +  AL L R +V RY  SSQ + RL QM  I+ +E   V+QDVETRWWST+A I RLL LR+ I  H+ +D +  LL + DWEVL+++EP+ +PF+ +QK  E ++ VT
Sbjct:  149 LESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVT 270          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.250e-21
Identity = 56/121 (46.28%), Postives = 72/121 (59.50%), Query Frame = 0
Query:    2 ESTTSSVFNGRSLG-ALGLERTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAIKLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVT 121
            ES TS  F G  +  AL L R +V RY  SSQ + RL QMC I+ +E   V+QDVETRWWST                 + +D +  LL++ DWEVL+L+EP+L PFM AQK LE ++ VT
Sbjct:   94 ESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVT 198          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A7R9HHX7_9NEOP (Hypothetical protein n=1 Tax=Timema monikensis TaxID=170555 RepID=A0A7R9HHX7_9NEOP)

HSP 1 Score: 69.3 bits (168), Expect = 2.600e-11
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   21 RTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAI--KLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVT 121
            R +VG Y +SS   ARL  +   + + AL ++QDVETRW S +AM+ RL+ LRKA+  +L  S  D+ SL S T+W++   I  +++PF +A  +  G  Y T
Sbjct:  165 RAIVGHYSRSSTANARLHAVQKTMDLPALKLIQDVETRWSSEYAMLDRLVCLRKAVAAELASSNSDIDSL-SSTEWKLAGGIVEVMRPFAEASTEACGNAYPT 266          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A7R9E9C6_9NEOP (Hypothetical protein n=1 Tax=Timema monikensis TaxID=170555 RepID=A0A7R9E9C6_9NEOP)

HSP 1 Score: 69.3 bits (168), Expect = 2.810e-11
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   21 RTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAI--KLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVT 121
            R +VG Y +SS   ARL  +   + + AL ++QDVETRW S +AM+ RL+ LRKA+  +L  S  D+ SL S T+W++   I  +++PF +A  +  G  Y T
Sbjct:  308 RAIVGHYSRSSTANARLHAVQKTMDLPALKLIQDVETRWSSEYAMLDRLVCLRKAVAAELASSNSDIDSL-SSTEWKLAGGIVEVMRPFAEASTEACGNAYPT 409          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A7R8Z5H1_TIMDO (Hypothetical protein n=1 Tax=Timema douglasi TaxID=61478 RepID=A0A7R8Z5H1_TIMDO)

HSP 1 Score: 68.9 bits (167), Expect = 3.750e-11
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   21 RTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAI--KLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVT 121
            R +VG Y +SS   ARL  +   + + AL ++QDVETRW S +AM+ RL+ LRKA+  +L  S  D+ SL S T+W++   I  +++PF +A  +  G  Y T
Sbjct:  308 RAIVGHYSRSSTANARLHAVQKTMDLPALKLIQDVETRWSSEYAMLDRLVCLRKAVAAELASSNSDIDSL-SSTEWKLAGGIVEVMRPFAEATTEACGNAYPT 409          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A7R9IZA8_TIMCA ((California timema) hypothetical protein n=1 Tax=Timema californicum TaxID=61474 RepID=A0A7R9IZA8_TIMCA)

HSP 1 Score: 68.9 bits (167), Expect = 3.760e-11
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   21 RTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAI--KLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVT 121
            R +VG Y +SS   ARL  +   + + AL ++QDVETRW S +AM+ RL+ LRKA+  +L  S  D+ SL S T+W++   I  +++PF +A  +  G  Y T
Sbjct:  464 RAIVGHYSRSSTANARLHAVQKTMDLPALKLIQDVETRWSSEYAMLDRLVCLRKAVAAELASSNSDIDSL-SSTEWKLAGGIVEVMRPFAEATTEACGNAYPT 565          
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Match: A0A7R8VLM2_TIMDO (Hypothetical protein n=1 Tax=Timema douglasi TaxID=61478 RepID=A0A7R8VLM2_TIMDO)

HSP 1 Score: 68.9 bits (167), Expect = 3.780e-11
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   21 RTLVGRYKKSSQMAARLSQMCGILTMEALSVMQDVETRWWSTWAMIVRLLYLRKAI--KLHKSMDDVHSLLSDTDWEVLRLIEPILQPFMKAQKDLEGAQYVT 121
            R +VG Y +SS   ARL  +   + + AL ++QDVETRW S +AM+ RL+ LRKA+  +L  S  D+ SL S T+W++   I  +++PF +A  +  G  Y T
Sbjct:  416 RAIVGHYSRSSTANARLHAVQKTMDLPALKLIQDVETRWSSEYAMLDRLVCLRKAVAAELASSNSDIDSL-SSTEWKLAGGIVEVMRPFAEATTEACGNAYPT 517          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI5.550e-6790.98Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE4.070e-5273.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE1.200e-2650.00Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JJV8_9PHAE2.060e-2548.36Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE2.250e-2146.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9HHX7_9NEOP2.600e-1140.78Hypothetical protein n=1 Tax=Timema monikensis Tax... [more]
A0A7R9E9C6_9NEOP2.810e-1140.78Hypothetical protein n=1 Tax=Timema monikensis Tax... [more]
A0A7R8Z5H1_TIMDO3.750e-1140.78Hypothetical protein n=1 Tax=Timema douglasi TaxID... [more]
A0A7R9IZA8_TIMCA3.760e-1140.78(California timema) hypothetical protein n=1 Tax=T... [more]
A0A7R8VLM2_TIMDO3.780e-1140.78Hypothetical protein n=1 Tax=Timema douglasi TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 17..121
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 20..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:256607..256972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15168.1mRNA_C-linearis_contig76.15168.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 255083..256972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15168.1 ID=prot_C-linearis_contig76.15168.1|Name=mRNA_C-linearis_contig76.15168.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=122bp
MESTTSSVFNGRSLGALGLERTLVGRYKKSSQMAARLSQMCGILTMEALS
VMQDVETRWWSTWAMIVRLLYLRKAIKLHKSMDDVHSLLSDTDWEVLRLI
EPILQPFMKAQKDLEGAQYVTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf