prot_C-linearis_contig74.15033.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15033.1
Unique Nameprot_C-linearis_contig74.15033.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length556
Homology
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 877 bits (2267), Expect = 0.000e+0
Identity = 420/524 (80.15%), Postives = 474/524 (90.46%), Query Frame = 0
Query:   33 SPTPSPHLNEHASPTMMYVPGMMPNTTHNSTDTPSPNEPIPKPECDSNKTVSVRYSATTGRLYLEAGVVGERGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGSHVTNNVFSNPGLIEWSNSTKNVVTGNIGLEGAEEL-LVEPACFDETDEEALADGDC 555
            +P+P+  +   A+PTM+ +P     T  N TDTPSPN PIPKPEC+S + VS+RYSATTGRLYLEAGV GERGGCVT++QIWEARGGGT TGAKAPL+A+DP++G  S+ ITGTWLLEEDLYVEDG+TLKVWGN SGGY +ELRLKS+P +++GGNGTY+NLRAHGGSLDFE+TKVFGWDT NN YDMDETDGRSYISAVSEIV+DP + C GNAKNTMGEARMDIV SEMGYMGFHDSESYGLTWKVRGFCKDKSNPE+FDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNT+HSNSGY GYDPHDDSD+LTIHDNVVYDNNWHGIIASKRCNNVSIQ NIVYGGN+TSAGIFLHRSSDYA+VK+N+CY NGDAGMAMLESSNA+ISGN+FEGNKYGIRMSVGC +N V NNT +NTS+YA+YTY+GSDP +VQ TGRSQDNIFDSNTV+GGPQAIK+KESDG+ +TNNVF  PGL+E+SN+T+NVVTGN+GLE A E+ LVEPACF ETDE +LA+  C
Sbjct:   72 TPSPAAMIAFTAAPTMLMMPAGN-GTAFNGTDTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGY-GYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACFAETDEASLAEYSC 593          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 617 bits (1590), Expect = 9.530e-216
Identity = 315/486 (64.81%), Postives = 370/486 (76.13%), Query Frame = 0
Query:   64 DTPSPNEPIPKPECDSNKTVSVRYSATTGRLYLEAGVVGERGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGSHVTNNVF----SNPGLIEWSNSTKNVVTGNIGL-EGAEELLV-EPACFD 543
            DT SPN+PI KP+CDS+  VS+RY+ TT RLYLE+     RGGC T+ QIWE+R G      KAPL+A+DP +G VSE  TGTWLL E+LYVEDG+TLKV+G   GG  +ELRL S+         TY+NLRAHGGSLDF  TKVF WDT  N  D DETDGRSYISAVSEIV D +E C GNAKNTMGEARMDI  SE+GY+GF DSESYGLTWKVRGFCKDKSNPEIFD VNVYGN+YDS++HH+ F +YTYGHQQGDWRRN +H NSGY G+DPHDDSD+LTIHDN VY+N +HGIIASKRCN VSIQ N VYGG ETSAGIFLHRSSD AIVK NY ++NGDAG+AMLES NAD+S N FE NKYG+RMSVGC +N+   N  SN SKY  YTY GSD PDV  +GRSQ+N+F  N+  G  + IKIKE+DG+   +NVF    ++  ++ + ++  +V+ GN GL EG  EL V   +CFD
Sbjct:   30 DTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSE-------TYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGY-GFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFD 501          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 597 bits (1540), Expect = 3.190e-208
Identity = 299/468 (63.89%), Postives = 365/468 (77.99%), Query Frame = 0
Query:   83 VSVRYSATTGRLYLEAGVVGE-RGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGSHVTNNVF----SNPGLIEWSNSTKNVVTGNIGLEGAE-ELLVE-PACFD 543
            VS+RY+ TT RLYLE+   G  RGGCVT+ QIWE+R G      K PL+A+DP +G VS + TGTWLL E+LYVEDG+TLKV+G+ +GG  +ELRL S+       N T++NLRAHGGSLDF +TKVF WDT  N  D DETDGRSYISA+SEI+ D +E C GNAKNTMGEARMDI  SE+GY+G+ DSESYGLTWKVRGFC+DKSNPE+FD VNVYGN+YDS++HHMNF +YTYGHQQGDWRRN +H NSGY G+DPHDDSD+LTIHDN VY+N +HGIIASKRCN VSIQ N VYGG ETSAGIFLHRSSD AIVK NY ++NGDAG+AMLES NAD+S N FE NKYG+R SVGC +N+  NNT SN ++Y  Y+Y G+D PDV  +GRSQ+N+F  N+  G  + IKIKE+DG+   +NVF    ++  ++ + N+T+N++ GN GL+  E EL V+  ACFD
Sbjct:   44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST-------NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGY-GFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFD 497          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 566 bits (1460), Expect = 3.140e-196
Identity = 283/480 (58.96%), Postives = 355/480 (73.96%), Query Frame = 0
Query:   64 DTPSPNEPIPKPECDSNKTVSVRYSATTGRLYLEAGVVGERGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGSHVTNNVFSNPGLIEWSNSTKNVVTGNIGLEGAEELLVEPACFD 543
            DT SPNEPIPKPECD +  VS+RYS+   RLYLE+     RGGCVT++QIWE + G      +APL+A+D  +G +S++ TGTWLL E+L+VEDG+TLKV G ++GG  +ELRL S+  SD     T++NLRAHGGSLDF +TKVF WDT  N  D DE DGRSY+SAVSE++ D ++ C G AKN MGEARMDI  SEMGY+G+H SESYGLTWKVRGFC DKSN ++F+ VNVYGNIYDS++HH NF VYTYGHQQGDWRRN +H NSGY G+DPHDDSD+LTIHDN VYDN +HGIIASKRCN VSIQ N VYGG  +SAGIFLHR                DAG+AM+ES NAD+S N+FE NKYGIR SVG   N+  NN  S +++Y+ Y+Y GSD PDV  +GRSQDN+F  N +IGG ++IK+ ++DG+   +N F +   I ++++ K +++GNIGL  ++  +V  A FD
Sbjct:   23 DTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRG------EAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLST--SD-----TFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGY-GFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFD 488          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 564 bits (1454), Expect = 1.020e-195
Identity = 277/473 (58.56%), Postives = 357/473 (75.48%), Query Frame = 0
Query:   73 PKPECDSNKTVSVRYSATTGRLYLEAGVVGERGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGSHVTNNVFSNPGLIEWSNSTKNVVTGNIGLEGAEELLVEPACFDET 545
            PKP+CDS+  VSVRY+A + RLY+E+     RGGCVT++QIWE +  G+      PL+A+DP +G VS + TGTWLL E++YVEDG+TL+V G ++GG  +ELRL S+  SD     T+++LRA+GGSLDF +TKVF WDT  N  D DE+DGRSYISAVSE++ D  + C G AKN MGEARMDI  SEM Y+G+H +E+YGLTWKVRGFC DK NPE+FD VNVYGNIYDS++HH NF VYTYGHQQGDWRRN +H NSGY G+DPHDDSD+LTIHDN V++N +HGIIASKRCN VSIQ N VYGG+  SAGIFLHRSSD  IVK NY ++NGDAG+AMLES NAD+S N FE NKYG+R+SVGC  N+   N  + ++++  ++Y G+D P+V  +GRSQDN+F  N +IGG ++I +KE+DG+   +N F +   I + ++TK +++GN GL  +   +   A FDE+
Sbjct:    6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGS------PLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLST--SD-----TFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGY-GFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDES 464          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: A0A6H5K1D5_9PHAE (MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D5_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 2.630e-182
Identity = 247/294 (84.01%), Postives = 275/294 (93.54%), Query Frame = 0
Query:  263 MGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGSHVTNNVFSNPGLIEWSNSTKNVVTGNIGLEGAEEL-LVEPACFDETDEEALADGDC 555
            MGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRN +HSNSGY GYDPHDDSD+LTIHDNVVYDNNWHGIIASKRCNNVSIQ NIVYGGN+TSAGIFLHRSSDYA+VK+N+CY NGDAGMAMLESSNA+ISGN+FEGNKYGIRMSVGC +N V+NNT +NTS+YA+YTY+GSDP +VQ TGRSQDNIFDSNTV+GGPQAIK+KESDG+ +TNNVF  PG++E+SN+T+NVVTGN+GLE A E+ LVEPACF ETDE +LA+  C
Sbjct:    1 MGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNVVHSNSGY-GYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVYNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGVVEFSNTTENVVTGNVGLEDATEVELVEPACFAETDEASLAEYSC 293          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 523 bits (1346), Expect = 2.010e-180
Identity = 256/374 (68.45%), Postives = 303/374 (81.02%), Query Frame = 0
Query:   83 VSVRYSATTGRLYLEAGVVGE-RGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSK 455
            VS+RY+ +T RLYLE+   G  RGGCVT+ QIWE+R G      K PL+A+DP +G VS + TGTWLL E+LYVEDG+TL+V+G+ +GG  +ELRL S+       N T++NLRAHGGSLDF +TKVF WDT  N  D DETDGRSYISA+SEI+ D +E C GNAKNTMGEARMDI  SE+GY+G+ DSESYGLTWKVRGFC+DKSNPE+FD VNVYGN+YDS++HHMNF +YTYGHQQGDWRRN +H NSGY G+DPHDDSD+LTIHDN VY+N +HGIIASKRCN VSIQ N VYGG ETSAGIFLHRSSD AIVK NY ++NGDAG+AMLES NAD+S N FE NKYG+R SVGC +N+  NNT SN ++
Sbjct:   44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLST-------NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGY-GFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 516 bits (1329), Expect = 2.180e-176
Identity = 264/486 (54.32%), Postives = 333/486 (68.52%), Query Frame = 0
Query:   64 DTPSPNEPIPKPECDSNKTVSVRYSATTGRLYLEAGVVGERGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGSHVTNNVFSNPGLIEWSNSTKNVVTGNIGLEGAEELLVEPACFDETDEEA 549
            +T S N+ I KP C S+  VS+RYS T+ RLYLE+     RGGCVT++ IW    GG      APL+A+ P +G VS +ITGTWLL E LYVEDG+TL+V G ++GG  +ELRL S+          ++NLRAHGGSLDF +TKVF WDT  N    D++ GRSYISAVSE++ D  + C G AK  MGEARMDI  SEM Y+G+  SESYGLTWKVRG C+D SN E+FD VNVYGNIYDS++HH  F VYTYGH+QGDWRRN +H N+ Y G+DPHDDSD+LTIHDN VY+N  HGIIASKRCN           G   S GIFLHRSSD AIVK+NY ++NGDAGMA++E+ NAD+S N FE NKYGIRMSVGC +N+   N  + +SKY +YTY+GSD P V  +GRSQD         GG + +K+  +DG+   +N F +   I + +    +++GN GL GA   + + +CFD+  + A
Sbjct:   23 NTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGG------APLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKD-------FINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEY-GFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSA 494          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 503 bits (1296), Expect = 2.380e-171
Identity = 260/480 (54.17%), Postives = 324/480 (67.50%), Query Frame = 0
Query:   64 DTPSPNEPIPKPECDSNKTVSVRYSATTGRLYLEAGVVGERGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVKNNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTFSNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGSHVTNNVFSNPGLIEWSNSTKNVVTGNIGLEGAEELLVEPACFD 543
            +T S N+ I KP C S+  VS+RYSA++ RLYLE+     RGGCVT+++IW+   G       APL+A+ P +G VS + TGTWLL EDLYVEDG+TL+V G ++GG   ELRL S+          ++NLRAHGGSLDF +TKVF WDT  N    D +  RSYISAVSEI+ D  E C G AK TMGEARMDI  SEM Y+G+  SESYGLTWKVRGFCKD SNPE+FD+VNVYGNIYDS++HH +F VYTYGH+QGDWRRN +H N  Y G+DPHDDSD+LTIHDN V                          G+  S GIFLHRSSD AIVK+N    NGDAGMA++ES NAD+S N FE NKYG+R+SVGC +N+   N  S++SKY +YTYEGSD P V  +GRSQDNIF  NT+ GG ++IK+  +DG+   +N F       + ++   +++GN GL  A   + + ACFD
Sbjct:   26 NTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDG------SAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKD-------FINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREY-GFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFD 491          
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 1.140e-138
Identity = 203/298 (68.12%), Postives = 235/298 (78.86%), Query Frame = 0
Query:   64 DTPSPNEPIPKPECDSNKTVSVRYSATTGRLYLEAGVVGERGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLEEDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGSLDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNTMGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIHDNVVYDNNWHG 361
            DT SPN+PI KP+CDS+  VS+RY+++T RLYLE+     RGGCVT+ QIWE R G      KAPL+A+DP +G  SEN TGTWLL E+LYVEDG+TLKV+G   GG  +ELRL S+         TY+NLRAHGGSLDF  TKVF WDT  N  D DETDGRSYISA+SEI+ D +E C GNAKNTMGEARMDI  SE+GY+GF DSESYGLTWKVRGFCKDKSNP IFD+VNVYGN+YDS++HHM F +YTYGHQQGDWRRN +H NSGY G+DPHDDSD+LTIHDN VY+N  HG
Sbjct:   29 DTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAG------KAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTD-------TYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGY-GFDPHDDSDFLTIHDNEVYNNGNHG 312          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD45_ECTSI0.000e+080.15Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI9.530e-21664.81Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI3.190e-20863.89Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE3.140e-19658.96Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAJ8_9PHAE1.020e-19558.56Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A0A6H5K1D5_9PHAE2.630e-18284.01MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE5_ECTSI2.010e-18068.45Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A8CEP1_SACJA2.180e-17654.32Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
Q7XAK2_9PHAE2.380e-17154.17Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
A0A6H5JU98_9PHAE1.140e-13868.12MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 475..496
e-value: 1700.0
score: 5.6
coord: 440..462
e-value: 560.0
score: 9.0
coord: 344..366
e-value: 6.3
score: 15.8
coord: 417..438
e-value: 5.9
score: 15.9
coord: 368..392
e-value: 72.0
score: 12.2
coord: 394..416
e-value: 470.0
score: 9.5
coord: 497..531
e-value: 3700.0
score: 3.2
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 98..468
e-value: 7.1E-87
score: 293.8
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 387..432
e-value: 4.9E-6
score: 24.1
coord: 411..454
e-value: 1.5E-5
score: 22.6
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 365..526
e-value: 2.2E-16
score: 60.1
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 302..518
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 302..518
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..555
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.741
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 145..513

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:609561..614402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15033.1mRNA_C-linearis_contig74.15033.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 608529..617029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15033.1 ID=prot_C-linearis_contig74.15033.1|Name=mRNA_C-linearis_contig74.15033.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=556bp
MASYKALRRLALAALLAAAVASDSSDASETADSPTPSPHLNEHASPTMMY
VPGMMPNTTHNSTDTPSPNEPIPKPECDSNKTVSVRYSATTGRLYLEAGV
VGERGGCVTIDQIWEARGGGTKTGAKAPLHAIDPMTGAVSENITGTWLLE
EDLYVEDGVTLKVWGNASGGYVEELRLKSSPASDEGGNGTYVNLRAHGGS
LDFENTKVFGWDTVNNDYDMDETDGRSYISAVSEIVIDPNELCVGNAKNT
MGEARMDIVKSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYG
NIYDSELHHMNFAVYTYGHQQGDWRRNTIHSNSGYAGYDPHDDSDYLTIH
DNVVYDNNWHGIIASKRCNNVSIQNNIVYGGNETSAGIFLHRSSDYAIVK
NNYCYNNGDAGMAMLESSNADISGNVFEGNKYGIRMSVGCTENMVHNNTF
SNTSKYALYTYEGSDPPDVQVTGRSQDNIFDSNTVIGGPQAIKIKESDGS
HVTNNVFSNPGLIEWSNSTKNVVTGNIGLEGAEELLVEPACFDETDEEAL
ADGDC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR022441Para_beta_helix_rpt-2
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence