prot_C-linearis_contig74.15015.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15015.1
Unique Nameprot_C-linearis_contig74.15015.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length369
Homology
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: D8LD63_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD63_ECTSI)

HSP 1 Score: 576 bits (1485), Expect = 1.390e-204
Identity = 274/321 (85.36%), Postives = 295/321 (91.90%), Query Frame = 0
Query:    7 GGVSDLSSIGLLRDAEEGRGGQDDVD----GYDGEDEDRNLDGQEYGFIMFDPVWGKPDYPPGHHTTKCQLCGVLCCPCLMGRDGWRGARNRNVWRRIRKRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLTLIQEGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHEEDEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALFHKPTEDARMLREPLRIKLRRLQGKI 323
            GGV +LSS+GLLRDAEEGRGG  D D    GYD + ED+N+DGQEYGF+MFDPVWGKPDYPPGHHTTKCQ CGVLCCPCLMGRDGWRG+RNRNVWRRIRKRAA+I S VDI  FVLSII NGGFQSMWGK DSNPLLGPS ETL+ LGAKHLTLIQEGQVWRLLTP+LLHGG+LHI MNL+SQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASP+KVGVGASGAIYAIMG WLSHV+CTW+EEDEFAKGAQLTQVV YT++GMAASLAPIVDWAAH GGL+TGI+VGWALFHKP ED+RMLREPLR +L RLQGKI
Sbjct:   71 GGVHNLSSMGLLRDAEEGRGGDRDADNSGGGYDDDWEDQNMDGQEYGFVMFDPVWGKPDYPPGHHTTKCQFCGVLCCPCLMGRDGWRGSRNRNVWRRIRKRAAIITSGVDIVAFVLSIIINGGFQSMWGKVDSNPLLGPSIETLMALGAKHLTLIQEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGAWLSHVLCTWNEEDEFAKGAQLTQVVLYTMVGMAASLAPIVDWAAHVGGLVTGILVGWALFHKPVEDSRMLREPLRRRLSRLQGKI 391          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A7S2R6S9_9STRA (Rhomboid-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6S9_9STRA)

HSP 1 Score: 174 bits (441), Expect = 6.340e-47
Identity = 101/271 (37.27%), Postives = 147/271 (54.24%), Query Frame = 0
Query:   44 DGQEYGFIMFDPVWGKPDYPPGHHTTKCQLCGVLCCPCL-MGR------DGWRGARNRNVWRRIR--KRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLTLIQ-EGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWH---EEDEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALF-HK 300
            D QE    + DPVWGK +  PG   +  Q+     CPCL +GR       G+         R +R     +V+++ V +A   ++I  + G        + NP++GP    L  LGAK+  LI    Q WRL TP+LLH G +H+ +N+  Q R+G  LE +WG   + I+Y   G    +LSC+A P+ +GVG+SGAI  I+G WL+ ++C W    EE+   + A L  V    +I ++ SL P+VDWAAH GGL+ G ++G  LF HK
Sbjct:  101 DAQEETLTLEDPVWGKLELAPGQRPSPTQIICFSLCPCLCIGRCCVKTPGGFYSCHPEKGARCLRFVLTLSVLLALVQVAMLAIAIALSDGL----APTEQNPMVGPYATILDRLGAKNAALIAYRNQWWRLFTPMLLHAGFIHLAVNVLIQVRIGVILEYQWGIAIYTIIYITSGFLSAILSCIALPDSLGVGSSGAIMGILGAWLAEIVCAWSSTPEEELGQRSANLVLVFLNILITLSFSLVPLVDWAAHIGGLLAGWMMGVVLFGHK 367          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A7S2AL17_9DINO (Rhomboid-like protease (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2AL17_9DINO)

HSP 1 Score: 164 bits (415), Expect = 2.190e-44
Identity = 98/297 (33.00%), Postives = 155/297 (52.19%), Query Frame = 0
Query:   52 MFDPVWGKPDYPPGHHTTKCQLCGVLCCPC-LMGRDGWRGARNRNVWRRIRKRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLTLIQ-EGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHEE---DEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALFHKPTEDARMLREPLRIKLRRLQGKICAWTVVVAFVVMAYWTFAVA 343
            ++DP+WG+     G     CQ     CCPC +MG     G + R  W++     +  +  + +   V+++   GG  ++    + NP++GP    L  LGAK+   I+   + WR+L+P+LLH G LH+V NLS Q R G  LE  WG  +WL VY   G  G L  C+ SP+ +GVG+SGA+  ++G W S ++ TW++    D   + AQ   VV   ++ +  S  P++D+AAH GGL+ G  V  A+F      A  L+  L  ++ R+ G           +++  W+FA+A
Sbjct:   27 LWDPLWGEIILAEGGRKRACQHFTFACCPCAMMG----CGGQARRFWQKFLLSWSFGLGLLQVIMMVVAVALYGGHDAV----ERNPMIGPHYHVLDKLGAKNAARIRWNWEWWRILSPMLLHAGWLHLVGNLSVQLRTGAMLEAAWGGASWLCVYVTSGAFGALAGCLMSPQHLGVGSSGALCGLLGAWASFILITWNQTSPVDIKLRNAQSFSVVLSMLVIIGLSFLPLMDFAAHVGGLLMGAAVAMAIF------ASRLQSLLWSRVTRVAG---------IALLLVLWSFALA 300          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A7S1FIW9_NOCSC (Rhomboid-like protease n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIW9_NOCSC)

HSP 1 Score: 155 bits (391), Expect = 1.270e-39
Identity = 88/256 (34.38%), Postives = 129/256 (50.39%), Query Frame = 0
Query:   52 MFDPVWGKPDYPPGHHTTKCQLCGVLCCPCLMGRDGWRGAR-----NRNVWRRIRKRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLTLIQEGQVW-RLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALF 298
            ++DP+WG          +       + CP +M   G   +R      +  W+R     + ++S +     V  I  +GG          NP++GP        GAK+   I+    W RLL+ V+LH G +HIV NL  Q R+G  LE  WG   WL++YWV G  G ++S V  P  +GVGASGAI  I+G W   ++CTW++    D+  + +Q   VV   +  +A S  P+VDWAAH GG+I G+ +G  LF
Sbjct:  128 LWDPIWGDMTLKNEDEVSWNVRVLYIMCPMIMVGFGLGQSRLVHVDKKAAWKRCFLSWSFVLSVLQTGCLVAQITVDGGIVPF----KENPMVGPGWAIFDEWGAKNAAKIKYNHEWYRLLSAVMLHAGWIHIVSNLMVQLRLGIMLEVLWGHTCWLVIYWVSGAYGTMVSSVMMPNTLGVGASGAICGIVGAWSVFIVCTWNQTLPRDKMTRNSQFMAVVWSLVALVALSFIPMVDWAAHIGGVIMGMGLGAFLF 379          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A6U0S1P1_9STRA (Rhomboid-like protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0S1P1_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.140e-38
Identity = 73/172 (42.44%), Postives = 106/172 (61.63%), Query Frame = 0
Query:  136 NPLLGPSPETLVHLGAKH-LTLIQEGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHEEDEF--------AKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALF 298
            NP++GP P+ + + GAK+ L ++ +G+ WRLLTPVLLH G+LH++ N+  Q+ +G F E+ WG+  WLIVY   G+G ++LS    P+ + VG+SGAI  + G  LS +   W+E  E          +  QL  V G  ++ M  S  P VDWAAH GGL++GI VG  +F
Sbjct:   97 NPMIGPYPDVMSYWGAKNALKILDDGENWRLLTPVLLHAGILHLIGNVHVQWDLGVFFEKEWGSAAWLIVYLTSGVGSSILSVYCMPDNISVGSSGAIMGLFGAKLSEIFVKWYEPRETILEKVGHAVRKEQLCMVSGGVVLVMLLSFIPYVDWAAHLGGLLSGIAVGMVVF 268          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A812VT23_9DINO (Rhomboid-like protease n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VT23_9DINO)

HSP 1 Score: 151 bits (381), Expect = 1.480e-38
Identity = 85/264 (32.20%), Postives = 135/264 (51.14%), Query Frame = 0
Query:   50 FIMFDPVWGKPDYPPGHHTTKCQLCGV----LCCPCLMGRDGWRGARNRNVWRRIRKRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLT-LIQEGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALFHKPTEDA 305
            + + DP+WG+        TT+           CCPC +   G      +  W +     ++I++ + +A  V  I  +GG  S     + NP+LGP    L   G K+   ++ +G+ WRL +  +LH G +H+  NL  Q   G  LE  WG   WL+VY+V G+  NLLSCV  P+ +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +V   ++ +  S  P++D+AAH GGL+ G      +F    + A
Sbjct:   88 YSVVDPLWGEVT------TTEAPSAWFRLLFCCCPCCI--VGCSTKEAKRAWVKFLCSCSLILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGEWWRLASATMLHAGWIHLAGNLVVQLHAGIQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMFGSRLQHA 339          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A813K155_POLGL (Rhomboid-like protease n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K155_POLGL)

HSP 1 Score: 147 bits (371), Expect = 5.210e-37
Identity = 99/305 (32.46%), Postives = 144/305 (47.21%), Query Frame = 0
Query:   50 FIMFDPVWGKPDYPPGHHTTKCQLCGVLCCPCLMGR----DGWRGARNRNVWRRIRKRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLTLIQE-GQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHEE---DEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALFHKPTEDARMLREPLRIKLRRLQGKICAWTVVVAFVVMAYWTFAVATCT 346
            F ++DP+WG            C    + CCPC+       DG+R       WR      A ++    +         +GG   +    + NP++GP    L   GAK+   I+   + WRLL+ V+LH G LH+  NL  Q R G  LE  +G   WL++Y + G    L SCV +P K+GVG+SGA+  ++G WLS ++ TW++    D  A+  Q   V    II +A+S  P++D+AAH GGLI GI +   LF       R+   P R   R     I  + +  AF+    W F   T T
Sbjct:  101 FQIWDPLWGDIKLTSSEAPGFCTRLLLNCCPCVFVSCRTDDGFRA------WRSFLLSWACLLGFAQVIXXXXXXXLSGGHMPL----EENPMIGPHYHALDPAGAKNAARIKVFDEWWRLLSAVMLHAGWLHLAGNLIIQLRTGAMLEVLFGHSAWLLIYIISGAYSELCSCVINPSKLGVGSSGALCGLVGAWLSFILITWNQTLPLDVKARNVQAFSVGFSIIIIVASSFLPLMDFAAHIGGLIMGISLAMVLF-----AGRLQHMPSRWATR-----IAGFCLGSAFLGFTVWWFVTQTET 385          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A812XH88_9DINO (Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XH88_9DINO)

HSP 1 Score: 149 bits (377), Expect = 2.070e-36
Identity = 84/257 (32.68%), Postives = 131/257 (50.97%), Query Frame = 0
Query:   50 FIMFDPVWGKPDYPPGHHTTKCQLCGV----LCCPCLMGRDGWRGARNRNVWRRIRKRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLT-LIQEGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALF 298
            + + DP+WG+        TT+           CCPC +   G      +  W +     + I++ + +A  V  I  +GG  S     + NP+LGP    L   G K+   ++ +G  WRL +  +LH G +H+  NL  Q   G  LE  WG   WL+VY+V G+  NLLSCV  P+ +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +V   ++ +  S  P++D+AAH GGL+ G      +F
Sbjct:  356 YSVVDPLWGEVT------TTEAPSAWFRLLFCCCPCCV--VGCSTKEAKRAWVKFLCSCSFILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMF 600          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A7S2THN5_9EUKA (Rhomboid-like protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THN5_9EUKA)

HSP 1 Score: 143 bits (360), Expect = 4.090e-36
Identity = 76/200 (38.00%), Postives = 118/200 (59.00%), Query Frame = 0
Query:  107 IISAVDIATFVLSII-----YNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLTLIQEGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHEEDEFAKGAQLTQVVGYTII----GMAASLAPIVDWAAHFGGLITGIVVGWAL 297
            IISA+ +   ++ +I     ++G F         N + GP P+T  ++GAK+L  IQEGQV+R +TP++LHGG+LH+  NL  Q R+G   E RWG  N+++ Y + G+G +  SC+ SP  + VGASGA++ ++G  +S++I  W       K  +L  V+   II    GM       +D +AHFGGL+ G ++G+AL
Sbjct:   86 IISAIQVIMLIVCLIVGATKFDGAFVK------GNDMGGPGPQTFKYMGAKYLPCIQEGQVYRFVTPIVLHGGILHLASNLFFQCRVGFIFELRWGLANYILTYVLTGIGASYFSCLMSPNSISVGASGALFGLIGADISYLIMNWQYLPGSEKYQELCIVICILIINFLFGMTGGGEGSIDNSAHFGGLVFGFLIGFAL 279          
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Match: A0A1Q9CX31_SYMMI (GTP-binding protein yptV4 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CX31_SYMMI)

HSP 1 Score: 149 bits (377), Expect = 5.790e-36
Identity = 84/257 (32.68%), Postives = 131/257 (50.97%), Query Frame = 0
Query:   50 FIMFDPVWGKPDYPPGHHTTKCQLCGV----LCCPCLMGRDGWRGARNRNVWRRIRKRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLGAKHLT-LIQEGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALF 298
            + + DP+WG+        TT+           CCPC +   G      +  W +     + I++ + +A  V  I  +GG  S     + NP+LGP    L   G K+   ++ +G  WRL +  +LH G +H+  NL  Q   G  LE  WG   WL+VY+V G+  NLLSCV  P+ +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +V   ++ +  S  P++D+AAH GGL+ G      +F
Sbjct:  871 YSVVDPLWGEVT------TTEAPSAWFRLLFCCCPCCV--VGCSTKEAKRAWVKFLCSCSFILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMF 1115          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD63_ECTSI1.390e-20485.36Rhomboid-like protein n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2R6S9_9STRA6.340e-4737.27Rhomboid-like protein n=1 Tax=Rhizochromulina mari... [more]
A0A7S2AL17_9DINO2.190e-4433.00Rhomboid-like protease (Fragment) n=1 Tax=Alexandr... [more]
A0A7S1FIW9_NOCSC1.270e-3934.38Rhomboid-like protease n=1 Tax=Noctiluca scintilla... [more]
A0A6U0S1P1_9STRA1.140e-3842.44Rhomboid-like protein n=1 Tax=Eucampia antarctica ... [more]
A0A812VT23_9DINO1.480e-3832.20Rhomboid-like protease n=2 Tax=unclassified Symbio... [more]
A0A813K155_POLGL5.210e-3732.46Rhomboid-like protease n=1 Tax=Polarella glacialis... [more]
A0A812XH88_9DINO2.070e-3632.68Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB... [more]
A0A7S2THN5_9EUKA4.090e-3638.00Rhomboid-like protein n=1 Tax=Lotharella oceanica ... [more]
A0A1Q9CX31_SYMMI5.790e-3632.68GTP-binding protein yptV4 n=1 Tax=Symbiodinium mic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 102..307
e-value: 4.2E-34
score: 119.7
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 157..300
e-value: 2.1E-32
score: 112.2
IPR002610Peptidase S54, rhomboidPANTHERPTHR22936RHOMBOID-RELATEDcoord: 102..342
NoneNo IPR availablePANTHERPTHR22936:SF69RHOMBOID-LIKE PROTEINcoord: 102..342
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..302
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 279..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 303..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 323..349
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 350..368
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 248..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..278
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..103
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 107..301
NoneNo IPR availableTMHMMTMhelixcoord: 202..219
NoneNo IPR availableTMHMMTMhelixcoord: 282..299
NoneNo IPR availableTMHMMTMhelixcoord: 104..126
NoneNo IPR availableTMHMMTMhelixcoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 224..246
NoneNo IPR availableTMHMMTMhelixcoord: 325..347
NoneNo IPR availableTMHMMTMhelixcoord: 259..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:470513..475598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15015.1mRNA_C-linearis_contig74.15015.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 470298..475751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15015.1 ID=prot_C-linearis_contig74.15015.1|Name=mRNA_C-linearis_contig74.15015.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=369bp
MVGSSAGGVSDLSSIGLLRDAEEGRGGQDDVDGYDGEDEDRNLDGQEYGF
IMFDPVWGKPDYPPGHHTTKCQLCGVLCCPCLMGRDGWRGARNRNVWRRI
RKRAAVIISAVDIATFVLSIIYNGGFQSMWGKRDSNPLLGPSPETLVHLG
AKHLTLIQEGQVWRLLTPVLLHGGLLHIVMNLSSQFRMGTFLEERWGTRN
WLIVYWVGGLGGNLLSCVASPEKVGVGASGAIYAIMGGWLSHVICTWHEE
DEFAKGAQLTQVVGYTIIGMAASLAPIVDWAAHFGGLITGIVVGWALFHK
PTEDARMLREPLRIKLRRLQGKICAWTVVVAFVVMAYWTFAVATCTIPVP
GRLPPRMPVFTQPHQPHL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom
IPR002610Peptidase_S54_rhomboid