mRNA_C-linearis_contig73.14969.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig73.14969.1
Unique NamemRNA_C-linearis_contig73.14969.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: A0A6H5L1H9_9PHAE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H9_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.520e-86
Identity = 167/293 (57.00%), Postives = 196/293 (66.89%), Query Frame = 1 
Query:    1 MEGLPLDVLLLVAVAVVGIVSLVAYIWRKLGSNQVGDASPGGAAEGAXXXXXXXXAPGR-ANHPGGECPICLAVEVASPVQTNCGHWFCSRRATRLNVAVKGAMASCILGYYDGLGRVRIKCPLCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTILLSWERSRAS 876
            MEGLPLDV+LLV++ +V + SLV YI RKL SN   D    GAA G          PGR A HPGGECPICL++EV +PVQTNCGHWFC+R               CIL YYD  GRVRI+CP+CRQ+VTMLH AA D  +                                     S E QE I+RFN+RNSG+ RSPWQV EDAPLLLRRLW+DL RGDT+VF EL+RRGVQLQL V ALYILSP+DV+PESL+GIAGL+DDLV+ + LLLH+T+VYRT+LLSWERSRA+
Sbjct:    1 MEGLPLDVILLVSIGIVAVTSLVVYISRKLTSN---DEDEEGAATGIDGSNNDTT-PGRLARHPGGECPICLSIEVETPVQTNCGHWFCAR---------------CILSYYDQGGRVRIRCPMCRQEVTMLHGAAGDAQA----------------AGDTDQAHDARAESAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAA 258
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: D7FX72_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX72_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 1.020e-45
Identity = 98/170 (57.65%), Postives = 118/170 (69.41%), Query Frame = 1 
Query:  367 LCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTILLSWERSRAS 876
            +CRQ+VTML+ AA D  +                                     S E QE I+RFN+RNSG+ RSPWQV EDAPLLLRRLW+DL RGDT+VF EL+RRGVQLQL V ALYILSP+DV+PESL+GIAGL+DDLV+ + LLLH+T+VYRT+LLSWERSRA+
Sbjct:    1 MCRQEVTMLYGAAGDAQA----------------AGDTDEAHDARAGSAPATTTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQLQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVLLSWERSRAA 154
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: A0A2Z7CY40_9LAMI (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CY40_9LAMI)

HSP 1 Score: 97.4 bits (241), Expect = 1.740e-19
Identity = 71/221 (32.13%), Postives = 103/221 (46.61%), Query Frame = 1 
Query:  199 CPICLAVEVASPVQTNCGHWFCSRRATRLNVAVKGAMASCILGYYD-GLGRVRIKCPLCRQDVTMLHPA-AEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTILLS 855
            C IC +     P Q NC HWFC                 CIL  ++ G      KCPLCR+++T+L P+ A    S    TA                                 E    I R+N +   +     Q  +D P LLRRL  D+R    +    +IR  V L ++V A+Y+LSPVD++PE LLG+ GL+DDL++ ++ +LH+ ++YR +LLS
Sbjct:   10 CSICHS-NFNIPCQANCSHWFCG---------------GCILQVWEHGAALHPCKCPLCRREITLLVPSEASSRQSHMVNTA---------------------------------EILRSIERYNRQYGERSNGVMQRVQDLPFLLRRLLRDIR-DPQRTLPVVIRARVYLAMVVSAIYVLSPVDIIPEGLLGVIGLLDDLIIVLICVLHVASLYRAVLLS 180
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: UPI0020095D38 (E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Salvia TaxID=21880 RepID=UPI0020095D38)

HSP 1 Score: 95.1 bits (235), Expect = 9.960e-19
Identity = 70/221 (31.67%), Postives = 102/221 (46.15%), Query Frame = 1 
Query:  196 ECPICLAVEVASPVQTNCGHWFCSRRATRLNVAVKGAMASCILGYYDGLGRVR-IKCPLCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTILLS 855
            EC IC       P Q NCGHWFC R               CIL  +D    +R  KCPLCR+++T+L P+     +  A                                    E  +RI  +N +      S  Q   D P LLRRL  D+     +    ++R  V L +++ A+Y+LSPVD++PE+LLGI GL+DDL++  +  L++  +YRT+L+S
Sbjct:    9 ECSICQQ-NFQIPCQANCGHWFCGR---------------CILQVWDFGHALRPCKCPLCRREITLLVPSEAHRTADGA------------------------------------EILQRIEHYNRQFGAHPNSLMQRMYDLPFLLRRLTRDIM-DPQRALPLVVRARVYLAMILSAMYVLSPVDIIPEALLGIIGLLDDLIVVFMCFLYVAALYRTVLVS 176
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: A0A2G5DUJ5_AQUCA (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DUJ5_AQUCA)

HSP 1 Score: 92.4 bits (228), Expect = 9.540e-18
Identity = 67/210 (31.90%), Postives = 95/210 (45.24%), Query Frame = 1 
Query:  232 PVQTNCGHWFCSRRATRLNVAVKGAMASCILG-YYDGLGRVRIKCPLCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVA-LYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTILLS 855
            P Q NC HWFCS               +CILG ++ G      KCP+CR+ +T+L P+ E                                       P   E  E I R+N    G  RS  Q   D P  L+RL  +L   D Q    L+ R      ++++ +YILSP+D++PE +LGI GL+DD+++ ++  LHI  +YRT LLS
Sbjct:   20 PCQANCSHWFCS---------------NCILGVWHHGSALQPCKCPICRRSITLLIPSEESQ--------------------------------GHHDDPVVSEALESIQRYNRLFGGGSRSLSQRVRDLPFFLKRLLRELM--DPQRSLPLVFRARMFFAMILSGIYILSPIDIIPEGILGIVGLLDDILIGLIFFLHIAAIYRTTLLS 180
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: UPI001FB083FF (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB083FF)

HSP 1 Score: 91.3 bits (225), Expect = 2.400e-17
Identity = 68/218 (31.19%), Postives = 97/218 (44.50%), Query Frame = 1 
Query:  199 CPICLAVEVASPVQTNCGHWFCSRRATRLNVAVKGAMASCILGYYD-GLGRVRIKCPLCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTIL 849
            C IC      +P Q NC HWFC R               CIL  +D G      KCPLCR+++T+L P+   +    +                                    E   RI R+N     +  S  Q  +D P LLRRL  DL      +   ++R  V L +LV  +YI+SPVD++PE +LGI GL+DD ++A++  LH+  +YR+ L
Sbjct:   10 CSICHN-NFTTPCQANCSHWFCGR---------------CILQVWDHGSSFQPCKCPLCRREITLLIPSRASSNECNSSEV--------------------------------AEVFGRIERYNRHFGQQTNSLVQRMQDLPFLLRRLTRDLMNPQRSL-PFVLRMRVYLAMLVSVIYIISPVDIIPEGILGIIGLLDDAIIALICFLHVAALYRSAL 178
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: A0A6I9UDJ8_SESIN (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UDJ8_SESIN)

HSP 1 Score: 90.9 bits (224), Expect = 3.270e-17
Identity = 67/220 (30.45%), Postives = 99/220 (45.00%), Query Frame = 1 
Query:  199 CPICLAVEVASPVQTNCGHWFCSRRATRLNVAVKGAMASCILGYYD-GLGRVRIKCPLCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTILLS 855
            C IC A     P Q NC HWFC                SCIL  ++ G      KCPLCR+++T+L P+   +                                         E  +RI R+N     +     Q  +D P LL+RL  D+      +   +IR  V L +LV A+Y++SPVD++PE+LLGI GL+DDL++  +  LH+  +YR +L++
Sbjct:   10 CSICHA-NFHIPCQANCSHWFCG---------------SCILQVWEHGAALHPCKCPLCRREITLLVPSEASS--------------------------------RRRHMSDVSEILQRIERYNRLYGERSNGLMQRMQDLPFLLKRLLRDVMDPQRSL-PFVIRARVYLAMLVSAIYVISPVDIIPEALLGIFGLLDDLIIVFICFLHVAALYRAVLVA 180
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: A0A1S3YLS3_TOBAC (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3YLS3_TOBAC)

HSP 1 Score: 90.5 bits (223), Expect = 4.440e-17
Identity = 67/219 (30.59%), Postives = 97/219 (44.29%), Query Frame = 1 
Query:  199 CPICLAVEVASPVQTNCGHWFCSRRATRLNVAVKGAMASCILGYYD-GLGRVRIKCPLCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTILL 852
            C IC       P Q+NC HWFC               A+CIL  +D G      KCPLCR+ +T+L P+   +   + P                                   E   RI  +N        S +Q   D P LLRRL  D+      +   +IR  V L +++  +Y+LSPVD++PE +LGI GL+DDL++  +  LH+  +YR++LL
Sbjct:   10 CSICHG-NFHVPCQSNCSHWFC---------------ANCILQVWDHGSALQACKCPLCRRPITLLVPSDSASRLHRDPVVP--------------------------------EVLRRIEHYNRHFGQHNSSLFQRVRDLPFLLRRLLRDMTDPQRSL-PFVIRARVYLAVILSGIYVLSPVDIIPEGILGIIGLLDDLIIMFICFLHVAALYRSVLL 179
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: A0A7J7CF81_TRIWF (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CF81_TRIWF)

HSP 1 Score: 90.1 bits (222), Expect = 6.200e-17
Identity = 69/219 (31.51%), Postives = 98/219 (44.75%), Query Frame = 1 
Query:  199 CPICLAVEVASPVQTNCGHWFCSRRATRLNVAVKGAMASCIL-GYYDGLGRVRIKCPLCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAEL-IRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTIL 849
            C IC      +P Q NC HWFC                +CIL  ++ G      KCPLCR+ +T+L PA                                         PT  E   +I  +N    G  R   Q  +D P LLRRL  ++   D Q    L I+  V + +++  +YI+SPVD++PE +LGI GL+DDLV+A+V  LH+  +YR++L
Sbjct:   10 CSICHG-SFNTPCQANCSHWFCG---------------NCILLVWHHGSALQPCKCPLCRRQITLLVPAEASLSE--------------------------------RHNPTVAEILGKIETYNRYFGGHTRGLIQRLQDLPFLLRRLLREML--DPQRSLPLVIKARVYIAMILSVVYIISPVDIIPEGILGIVGLLDDLVIALVCFLHVAAIYRSVL 178
[Close]
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Match: A0A0B0PUN2_GOSAR (E3 ubiquitin-protein ligase RNF170 n=16 Tax=Malvaceae TaxID=3629 RepID=A0A0B0PUN2_GOSAR)

HSP 1 Score: 89.0 bits (219), Expect = 1.520e-16
Identity = 64/220 (29.09%), Postives = 97/220 (44.09%), Query Frame = 1 
Query:  199 CPICLAVEVASPVQTNCGHWFCSRRATRLNVAVKGAMASCI-LGYYDGLGRVRIKCPLCRQDVTMLHPAAEDTPSPKAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTSLETQERITRFNERNSGKRRSPWQVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDVMPESLLGIAGLVDDLVLAIVLLLHITTVYRTILLS 855
            C IC       P Q NC HWFC                +CI L +  G      KCPLCR+ +T+L P                                          P   E  E++ ++N    G+     Q  +D P LLRRL  ++     +    +IR  + L + + A+YI SP+D++PE++LG+ GL+DDL++A+V  LH+ T+YR++L S
Sbjct:   10 CSICHGY-FNVPCQANCSHWFCG---------------NCIMLVWQHGSPFQTCKCPLCRRQITLLVPGEASL--------------------------------RERHNPAVAEVLEKVEKYNRYFGGQSNGLIQRLQDLPFLLRRLLREIT-DPQRTLPLVIRARIYLAMFLSAIYIFSPIDIIPEAILGVVGLLDDLLIALVGFLHVATIYRSVLYS 180
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H9_9PHAE1.520e-8657.00E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocar... [more]
D7FX72_ECTSI1.020e-4557.65RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A2Z7CY40_9LAMI1.740e-1932.13E3 ubiquitin-protein ligase RNF170 n=1 Tax=Dorcoce... [more]
UPI0020095D389.960e-1931.67E3 ubiquitin-protein ligase RNF170-like n=3 Tax=Sa... [more]
A0A2G5DUJ5_AQUCA9.540e-1831.90E3 ubiquitin-protein ligase RNF170 n=1 Tax=Aquileg... [more]
UPI001FB083FF2.400e-1731.19E3 ubiquitin-protein ligase RNF170 n=1 Tax=Impatie... [more]
A0A6I9UDJ8_SESIN3.270e-1730.45E3 ubiquitin-protein ligase RNF170 n=1 Tax=Sesamum... [more]
A0A1S3YLS3_TOBAC4.440e-1730.59E3 ubiquitin-protein ligase RNF170 n=1 Tax=Nicotia... [more]
A0A7J7CF81_TRIWF6.200e-1731.51E3 ubiquitin-protein ligase RNF170 n=1 Tax=Tripter... [more]
A0A0B0PUN2_GOSAR1.520e-1629.09E3 ubiquitin-protein ligase RNF170 n=16 Tax=Malvac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:688601..693298 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.9
Seed ortholog evalue7.3e-41
Seed eggNOG ortholog2880.D7FX72
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.ubiquitin-like protein transferase activity
EggNOG OGsKOG2164@1,KOG2164@2759
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-10_004530.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2765
Cds size1140
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14969.1prot_C-linearis_contig73.14969.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig73 688601..691673 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930404.538538-CDS-C-linearis_contig73:688600..6887051622930404.538538-CDS-C-linearis_contig73:688600..688705Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 688601..688705 +
1690881052.6637685-CDS-C-linearis_contig73:688600..6887051690881052.6637685-CDS-C-linearis_contig73:688600..688705Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 688601..688705 +
1622930404.5516207-CDS-C-linearis_contig73:689321..6895301622930404.5516207-CDS-C-linearis_contig73:689321..689530Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 689322..689530 +
1690881052.6794724-CDS-C-linearis_contig73:689321..6895301690881052.6794724-CDS-C-linearis_contig73:689321..689530Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 689322..689530 +
1622930404.5658007-CDS-C-linearis_contig73:690019..6900861622930404.5658007-CDS-C-linearis_contig73:690019..690086Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 690020..690086 +
1690881052.6912916-CDS-C-linearis_contig73:690019..6900861690881052.6912916-CDS-C-linearis_contig73:690019..690086Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 690020..690086 +
1622930404.5811822-CDS-C-linearis_contig73:690516..6908761622930404.5811822-CDS-C-linearis_contig73:690516..690876Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 690517..690876 +
1690881052.704488-CDS-C-linearis_contig73:690516..6908761690881052.704488-CDS-C-linearis_contig73:690516..690876Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 690517..690876 +
1622930404.5936255-CDS-C-linearis_contig73:691274..6916731622930404.5936255-CDS-C-linearis_contig73:691274..691673Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 691275..691673 +
1690881052.715323-CDS-C-linearis_contig73:691274..6916731690881052.715323-CDS-C-linearis_contig73:691274..691673Chordaria linearis ClinC8C monoicousCDSC-linearis_contig73 691275..691673 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930404.6180499-UTR-C-linearis_contig73:691673..6932981622930404.6180499-UTR-C-linearis_contig73:691673..693298Chordaria linearis ClinC8C monoicousUTRC-linearis_contig73 691674..693298 +
1690881052.7264183-UTR-C-linearis_contig73:691673..6932981690881052.7264183-UTR-C-linearis_contig73:691673..693298Chordaria linearis ClinC8C monoicousUTRC-linearis_contig73 691674..693298 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig73.14969.1

>prot_C-linearis_contig73.14969.1 ID=prot_C-linearis_contig73.14969.1|Name=mRNA_C-linearis_contig73.14969.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=380bp
MEGLPLDVLLLVAVAVVGIVSLVAYIWRKLGSNQVGDASPGGAAEGAGGA
GGGDAAPGRANHPGGECPICLAVEVASPVQTNCGHWFCSRRATRLNVAVK
GAMASCILGYYDGLGRVRIKCPLCRQDVTMLHPAAEDTPSPKAPTAAAAA
AATSSNTATDGGTIAPTPPPPPPPRPTSLETQERITRFNERNSGKRRSPW
QVAEDAPLLLRRLWADLRRGDTQVFAELIRRGVQLQLLVVALYILSPVDV
MPESLLGIAGLVDDLVLAIVLLLHITTVYRTILLSWERSRASPAAAAAAA
SAVPPGQGSLANSPMGAGLAAVVAVAAGAAATCAGAGAGVAAAAAVATGA
AAAAAASEAGSSSSSGARGGMPPPLARDW*
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mRNA from alignment at C-linearis_contig73:688601..693298+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig73.14969.1 ID=mRNA_C-linearis_contig73.14969.1|Name=mRNA_C-linearis_contig73.14969.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4698bp|location=Sequence derived from alignment at C-linearis_contig73:688601..693298+ (Chordaria linearis ClinC8C monoicous)
ATGGAGGGACTCCCCCTAGATGTATTACTTCTTGTGGCAGTCGCTGTCGT
GGGTATCGTTTCGCTCGTGGCCTACATCTGGAGAAAGCTGGGTTCCAACC
AGGTGGTGTGTACATCGATTGGATACTTTCGATACTTTCGATACACTGAC
TGCTACACCCCTGCATTGCGCGTTGCAGAATTGCGCGCAGACGAGAGCAA
CTGGTACTGTATATCTCCACTCTCAAAGCACACGTTCGAGTTTCTCCTAC
CACAGCGTGTGTGAGGTGTAGTGTGGGGAAAAATCTGTTTTACTTGAGCT
TGTACAAGTTACTGCCAAACACGGCGGTGTGGAGACATTCGTCTCCGAGG
GAGTCGTTTCACGCACACCTCTCTCTCGCCGCCCCCGACCAAAGTCCCGT
ATTCCATACCAACTGGCTGAACAAAGCACCCACAGCTCCACTACCCGCGA
ACCCGCATCTTGTCCACAATTGGAATTCCGTTTCCATCTCTCTGCAGAAT
TTCGGAATTGTTTTGCTCTGATTCGAGTTGCCTTGAACTCCTGCGCATTG
CACACATGGCACCATGAGAGGGCACGACAACCTACCGATCCACTTTTGGT
CGGCCGAAGCTTTCATGCGCCCCCTGTTCCTTGTTTTGTCAAGTGGAAGG
CCATTTGTGCTGCTGGCAGTCCTGCTGGTTTCTGAAACACCGCATGTATG
TATATTTGTCAACGCCCCCAGGGAGATGCATCTCCAGGTGGTGCCGCTGA
AGGCGCCGGTGGGGCCGGGGGCGGGGACGCGGCTCCAGGCAGAGCGAACC
ACCCCGGCGGCGAGTGCCCGATCTGTCTGGCAGTCGAGGTGGCGAGCCCT
GTACAAACGAACTGCGGCCACTGGTTCTGCTCCAGGCGAGCAACAAGACT
AAATGTAGCAGTCAAAGGGGCGATGGCATCGTCTAGACTATGCGTGTATG
TCTTGTCTACAGCAGTATACAACCAAAGCGATGAAAACGCCTTGCTTGGT
GGACAACGGGGGAGACAGGCAATACATACAGACGAATCGGTGGGCGTTTT
CGGCCACACGACGACCCCCCTCCTTAGAGCGTTCGGTGGCTGGTAGGGCG
CGCGCACCTGCCTTTGCTCTGTGAGTCAGGCAAGGATAAGCATGACAAAT
GTCACCGACGGATACCGCAGCTTGTACAATGTTGTGGATGCGCCTCCCGG
TCTGCTTCGTCGTCATGAGCGAAACAGCGTCCCAGCATCCGGATGCACTG
GGCATATGTCGTTCGCTTGTCAGCTTCGAAACGTCATGTCTTGTCTTGCC
AACTCAGTCATGAGCGCTGCGGGCGGTGTATAGACTATGTCAAGGTAATC
CTCTCTTCTCTCCGTCTCACAACATGCCGCAACCATACATCCTGCCGTGA
CGTGCCACCTTTGTCGCAGTTGCATTCTGGGTTACTACGACGGCCTTGGC
AGGGTTCGGATAAAGTGCCCACTATGTCGCCAGGATGTGAGTCGGCATGA
CACCCGTCACCGCCACCCCTCGCCCCAGTAGGACGGGAGCCCACCTACTT
TGCCGCGCCATGACTGGCTTGTGTTTGCCTTTCGTCACTGCTGTTGGCAA
AGTGTGAGGCGAACCAAAAGTCCAGTCTGAATCGGCCCGTGTTTCGTCTA
TATAGCGGTGTGGTGTCCTGCGGGCAGGCAGCTCGGGCCGACACCCGCGA
CAAGACACGCACCCCGCATCCTCGGTGTATGATCAGGAACAGAGGGCAAG
ACGCCGTCCGCATGCTGATGATTTCTCTCTCGTTTCCTATTATAGTATAC
AAATACATGCCCGCCCTGTTGTGGGCTGCACACCAGTGAGCCTTTCCCAC
AATCCGGCTCCACATCTTGCACCCCCTGCCCGCTCGCGTCGTTGGATGTC
GCAACGCGCACACCAGGTAACAATGCTACACCCAGCAGCAGAAGACACCC
CCTCCCCAAAAGCGCCCACCGCCGCCGCCGCCGCCGCCGCTACTTCTTCA
AACACCGCAACAGACGGTGGCACGATTGCTCCGACACCACCACCACCACC
ACCACCACGACCGACGTCGCTGGAGACGCAGGAGCGAATAACTAGGTTTA
ACGAGCGGAACTCGGGGAAACGGAGATCGCCCTGGCAGGTGGCCGAGGAC
GCCCCGCTCCTTCTGCGGCGGCTGTGGGCGGACCTGAGACGGGGGGACAC
GCAGGTGTTCGCCGAGCTGATCCGGCGGGGCGTACAGCTTCAGCTCTTGG
TTGTGGCGCTCTACATCCTGAGCCCGGTGCGTGTTTTAGTTGGTTGTTGG
CTTTTTTGGCTTTGGTCTTGGTTTTTGGTCGAGCGTGATTTGCGCGCGCG
AGCGTGTGTGTGTGGCGAGAGCCTAGCCGGAAGCTTCGCATTCTTGGTTG
TTTTGTGCATGGGAAGTGTGTGCGTGTTGAGCGTGCGGTATCATGTGGCG
TTAAGGGTTAGGGTTTGCAGGTTCGACCGTTCTTGGTAGCGATGCGCTAT
TTCTCGACAGAGGCAGTGTGCCACTCACCAAAGCACACCCTCCTCTGCAC
CACCGTGCGCCTGTTTCGATGACGCCCCGCTGTGGTCATCCGTCCCCGTG
CCCCTCCTCCTCCTCCTCCTCCTCCTCCCCACCACTCCGCCCTCCACATC
TGCCATCCTCCCCGACACCCCTAGGTCGACGTCATGCCCGAGAGTTTGCT
CGGCATCGCCGGCCTCGTGGACGACCTTGTCTTGGCCATCGTGCTGCTGC
TCCACATCACCACGGTGTACCGGACGATTCTTCTTTCGTGGGAGAGATCT
CGGGCCTCCCCCGCCGCTGCGGCCGCCGCCGCATCTGCGGTGCCCCCCGG
GCAGGGGAGCCTCGCGAACTCGCCGATGGGGGCCGGGCTAGCGGCCGTTG
TCGCCGTGGCGGCGGGGGCGGCGGCGACGTGTGCCGGGGCGGGGGCCGGG
GTGGCGGCGGCGGCGGCGGTGGCGACGGGGGCGGCGGCGGCGGCGGCGGC
GTCGGAGGCAGGGTCTTCTTCGTCGAGTGGTGCGCGGGGGGGGATGCCGC
CACCGCTGGCTCGGGATTGGTAGGCTGTTATATTGTTCTCAAGATGGAAG
GTGTATAGCGTTTTTCGGTTTTGGTTTTGGTCGCGCTTTGGTTGCAAAGG
GAAGGGTTTTAGTGTGCGTGGTGTTTGTGTGCGGTTTTCTGGTGGCGGGA
AAGGGGCGCACGGCGTCTTCCAAGGCGCAGATTGAGCTGTTTCGGTACGT
GGGGAAGTGCCGCAAGCTTGATGAGTAGAGCCGCCTTGCTTTTCTTCTTC
ATCTTGTTTGCAGGGCATCTTCGCGTGGCAAGTGAGCGTCGTCTGTATCG
TGAACATGCAGTACATGTTGAGTACGCTGGTTGGTAAGCGTAGGTCAACC
AGGCCTGGGCTGTAGAGGGAATACTTTCCACCAGGGCAGTGAATCCTGGC
GGTTAGAGCGCCAATGCAGCTTATGTTTGTCACGTGTGTGAGTAGGGCTT
GGAGGGAGGTAAAGCCGTGAAACAACTGCGCCGAACTTACCGACCAAATC
AGAAAGAAATAGGGCGCTCTGCGAACCATCGCGGTGACTCTTTCGCGCAA
GCTGTTCCGCCACGCCACGGACACTTGCCTCGATGAGCCCGAAAGAACGG
AAGTGCTCTGCCAACCATTTGCTGCCCGCGTCGAACTCTTGTGACGGGCG
GACCTAAAAACGAATGTGGAGGTAATACCTACACTCAAAACACAATTGGT
AGGGCACCTTTCTTTTCAGGGTCAGTCGTCGCAAGGTTTGGGGGCGACGA
GGGTGCCTTTTTGAGGCAAACATATCGGGGTAATCCCTTGACGATGACGG
ATGAGCTTGATCCGCGCGCGTTGAATTGGACTCGCTGTTGTTGTCTCGTT
TTGGTGTGCGTGGTGTTTTGTGGGGTCGTCTGGTGTGTACACACGGCGAG
AAATGGCTTGTGTGGTGTGCAGAATGTTCAAGACGCAGATGGACGTTTCG
CCACGTCGAGAAAGGCCGCAAGCTCCCTGAACCGGCTGAAAAACTAGCAC
TCAGCGAACCCCTTTTCTTTTTTCGGTTCCATTGGCACTTGGCGCTCTTT
TTAGGCGTTGTTGATACTTGCCACCCACCTTGTGCAGCAGTCTACAGGTT
GAGTACGCCGATCAAGCTTGGGTCGGCCAGGCTTGGGCTGTATATCGGGC
GTGTACCAACCGTGCAGTGCATCCTGGTGGTTATAGCCGATGCAGCTCAT
GTTGTCAGGTGTGCGAGTAGGAGTAGAGTTCGGAGGTAGTTAAAAGCCGT
GAGGATGTGTTGGTTGATTTCAGCTACTTATAGAAGGAACTCTTCGCCAC
CGGGTATCTACCTGGTATGGTCAGATGGGCGAATCTTGATCCGTGCACTT
TTTATTATAGTTTGTTGCTCCCGCCTAGTCTAGTCGCCCTTCTTGCTAGG
CAACATATGCGTTGCACGACGTGCTCCTGCAACGGTGTGTTTCGTCTCCT
GGAACGGCGCGATTGGTGTTTACCGCGTGCAAGGGCACAGATCACATGTT
GCGAGATCCTGACCGGTAATCCGAAAGTTGAATAACGCAAGGCCACGTCC
GAGAGGCGAGGCGCATGGCCACAACCTCAAGGGAATGGGTTCAAGTGGAT
GCCAAGCGCTACCATCTGCTGCTGCTGCTGCTGCTGCTGTAAATCGAT
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Coding sequence (CDS) from alignment at C-linearis_contig73:688601..693298+

>mRNA_C-linearis_contig73.14969.1 ID=mRNA_C-linearis_contig73.14969.1|Name=mRNA_C-linearis_contig73.14969.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2280bp|location=Sequence derived from alignment at C-linearis_contig73:688601..693298+ (Chordaria linearis ClinC8C monoicous)
ATGGAGGGACTCCCCCTAGATGTATTACTTCTTGTGGCAGTCGCTGTCGT
GGGTATCGTTTCGCTCGTGGCCTACATCTGGAGAAAGCTGGGTTCCAACC
AGGTGATGGAGGGACTCCCCCTAGATGTATTACTTCTTGTGGCAGTCGCT
GTCGTGGGTATCGTTTCGCTCGTGGCCTACATCTGGAGAAAGCTGGGTTC
CAACCAGGTGGGAGATGCATCTCCAGGTGGTGCCGCTGAAGGCGCCGGTG
GGGCCGGGGGCGGGGACGCGGCTCCAGGCAGAGCGAACCACCCCGGCGGC
GAGTGCCCGATCTGTCTGGCAGTCGAGGTGGCGAGCCCTGTACAAACGAA
CTGCGGCCACTGGTTCTGCTCCAGGCGAGCAACAAGACTAAATGTAGCAG
TCAAAGGGGCGATGGCATCGGAGATGCATCTCCAGGTGGTGCCGCTGAAG
GCGCCGGTGGGGCCGGGGGCGGGGACGCGGCTCCAGGCAGAGCGAACCAC
CCCGGCGGCGAGTGCCCGATCTGTCTGGCAGTCGAGGTGGCGAGCCCTGT
ACAAACGAACTGCGGCCACTGGTTCTGCTCCAGGCGAGCAACAAGACTAA
ATGTAGCAGTCAAAGGGGCGATGGCATCTTGCATTCTGGGTTACTACGAC
GGCCTTGGCAGGGTTCGGATAAAGTGCCCACTATGTCGCCAGGATTTGCA
TTCTGGGTTACTACGACGGCCTTGGCAGGGTTCGGATAAAGTGCCCACTA
TGTCGCCAGGATGTAACAATGCTACACCCAGCAGCAGAAGACACCCCCTC
CCCAAAAGCGCCCACCGCCGCCGCCGCCGCCGCCGCTACTTCTTCAAACA
CCGCAACAGACGGTGGCACGATTGCTCCGACACCACCACCACCACCACCA
CCACGACCGACGTCGCTGGAGACGCAGGAGCGAATAACTAGGTTTAACGA
GCGGAACTCGGGGAAACGGAGATCGCCCTGGCAGGTGGCCGAGGACGCCC
CGCTCCTTCTGCGGCGGCTGTGGGCGGACCTGAGACGGGGGGACACGCAG
GTGTTCGCCGAGCTGATCCGGCGGGGCGTACAGCTTCAGCTCTTGGTTGT
GGCGCTCTACATCCTGAGCCCGGTAACAATGCTACACCCAGCAGCAGAAG
ACACCCCCTCCCCAAAAGCGCCCACCGCCGCCGCCGCCGCCGCCGCTACT
TCTTCAAACACCGCAACAGACGGTGGCACGATTGCTCCGACACCACCACC
ACCACCACCACCACGACCGACGTCGCTGGAGACGCAGGAGCGAATAACTA
GGTTTAACGAGCGGAACTCGGGGAAACGGAGATCGCCCTGGCAGGTGGCC
GAGGACGCCCCGCTCCTTCTGCGGCGGCTGTGGGCGGACCTGAGACGGGG
GGACACGCAGGTGTTCGCCGAGCTGATCCGGCGGGGCGTACAGCTTCAGC
TCTTGGTTGTGGCGCTCTACATCCTGAGCCCGGTCGACGTCATGCCCGAG
AGTTTGCTCGGCATCGCCGGCCTCGTGGACGACCTTGTCTTGGCCATCGT
GCTGCTGCTCCACATCACCACGGTGTACCGGACGATTCTTCTTTCGTGGG
AGAGATCTCGGGCCTCCCCCGCCGCTGCGGCCGCCGCCGCATCTGCGGTG
CCCCCCGGGCAGGGGAGCCTCGCGAACTCGCCGATGGGGGCCGGGCTAGC
GGCCGTTGTCGCCGTGGCGGCGGGGGCGGCGGCGACGTGTGCCGGGGCGG
GGGCCGGGGTGGCGGCGGCGGCGGCGGTGGCGACGGGGGCGGCGGCGGCG
GCGGCGGCGTCGGAGGCAGGGTCTTCTTCGTCGAGTGGTGCGCGGGGGGG
GATGCCGCCACCGCTGGCTCGGGATTGGTAGGTCGACGTCATGCCCGAGA
GTTTGCTCGGCATCGCCGGCCTCGTGGACGACCTTGTCTTGGCCATCGTG
CTGCTGCTCCACATCACCACGGTGTACCGGACGATTCTTCTTTCGTGGGA
GAGATCTCGGGCCTCCCCCGCCGCTGCGGCCGCCGCCGCATCTGCGGTGC
CCCCCGGGCAGGGGAGCCTCGCGAACTCGCCGATGGGGGCCGGGCTAGCG
GCCGTTGTCGCCGTGGCGGCGGGGGCGGCGGCGACGTGTGCCGGGGCGGG
GGCCGGGGTGGCGGCGGCGGCGGCGGTGGCGACGGGGGCGGCGGCGGCGG
CGGCGGCGTCGGAGGCAGGGTCTTCTTCGTCGAGTGGTGCGCGGGGGGGG
ATGCCGCCACCGCTGGCTCGGGATTGGTAG
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