prot_C-linearis_contig73.14940.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14940.1
Unique Nameprot_C-linearis_contig73.14940.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1415
Homology
BLAST of mRNA_C-linearis_contig73.14940.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 4.200e-121
Identity = 238/383 (62.14%), Postives = 268/383 (69.97%), Query Frame = 0
Query: 1031 AIAADMSLEDRLKKAIERGNAIAIQSIYDEADQTPGAGMKKIKKKCQRWLNKKAGEEQKLQQATKPAPVLRAAGAAGAAATALASQRPTHFEMFCPNNIAPQLIGKMGMTINRLMKESKAKIVVRPHPDKSGNDVVITGTPAAVKHVTKLVGEFYRSKGCDPTTLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVEDGAWGGELRQLLKVAGCEHHLERFRKDQLDGEVLLMMEREDFERMGVTEVSLTRRVVRALGSRGGRTNFLGVAAGDGVVGRRYCEIRILNGLKVGGGGAANDDE-DSDGLDPDHPDTCKICMDALVDILFLPCAHQCTCSRCGGAFAGKACILCRAEVKKVQKVIRVR 1412
            A+ ADMSLE RLKKAI+ GN +A+QSIYDEADQTPGA MKKIKKKCQR+LNKKAGE+QKLQQA++PAPV R A           +QRPT  +MFCPNNIAPQLIGK G T+N+LMK+S+AKIVV+P+PD+SGNDV+ITGTP AVK   +LV EFYRSKGC P+ LPP                         XXXXXXXXXX          VVEDGAWGGELRQLL+VAGCEHHLERFR+DQLDGEVLLMM+R DFERMGVTE                         G+        +IRILN LK  GG        DSDGLDPDHPDTCKIC+DALVDILFLPCAHQCTCSRCG A+ GK CILCR  V KVQ+VI++R
Sbjct:  678 ALLADMSLEVRLKKAIDSGNTLAVQSIYDEADQTPGASMKKIKKKCQRYLNKKAGEDQKLQQASQPAPV-RGAXXXXXXXXXXXAQRPTQHDMFCPNNIAPQLIGKQGQTVNKLMKDSRAKIVVKPYPDRSGNDVIITGTPNAVKTAKRLVEEFYRSKGCQPSALPPPSSAVAARKAEGARARPAQPVTGGPXXXXXXXXXX---------VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTE-------------------------GE--------QIRILNALKGSGGXXXXXXXXDSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLR 1017          
BLAST of mRNA_C-linearis_contig73.14940.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 2.640e-90
Identity = 219/447 (48.99%), Postives = 264/447 (59.06%), Query Frame = 0
Query: 1031 AIAADMSLEDRLKKAIERGNAIAIQSIYDEADQTPGAGMKKIKKKCQRWLNKKAGE----EQKLQQATKPAPV----LRAAGAAGAAAT-----ALASQRPTHFEMFCPNNIAPQLIGKMGMTINRLMKESKAKIVVRPHPDKSGNDVVITGTPAAVKHVTKLVGEFYRSKGCDPTTLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------PAVVEDGAW----------GGELRQLLKVAGCEHHLERFRKDQLDGEVLLMMEREDFERMGVTEVSLTRRVVRALGSRGGRTNFLGVAAGDGVVGRRY-CEIRILNGLKVGGGGAA----------NDDEDSDGLDPDHPDTCKICMDALVDILFLPCAHQCTCSRCGGAFAGKACILCRAEVKKVQKVIRVR 1412
            ++  DMSLE RL+KAIERGNA+A+Q+I+DEADQTPGA MKK+KKKC++WLNKK GE    +Q+L QA +P P     LR AG      T     A A+QRPT +EMFCPN IA Q+IG+ G T+NRLMKES+A+IV++P+ DK+G+DVVITG+P A     +LV +FYRSKG +PT LPPXXXXXXXXXXXXX                                                             P V   G            GGEL QLL+ A CEHHLERF +DQLDGEVLL MER DF+RMGVTE   +R ++ AL   G               GRR     R++  ++   GG A          ++D DSDGLDPDHPDTCKICMDALV ILFLPCAHQCTC RCG  F GK CI+CR +V + Q VIR+R
Sbjct:  630 SLVVDMSLEVRLRKAIERGNALAVQAIHDEADQTPGADMKKMKKKCKKWLNKKEGEMREEQQRLLQANQPPPNPALGLRQAGPGFGVPTPPVAAAAAAQRPTQYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKPYADKTGHDVVITGSPQATAR--RLVEDFYRSKGIEPTHLPPXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAVAGPAAAAAAGMRAPSGAIPQGARPVAQPVVYGGGXXXXXXXXVDVSGGELPQLLRAARCEHHLERFLRDQLDGEVLLEMERRDFDRMGVTEAEQSR-ILSALKHAGEGXXXXXXXXXXXXXGRRENLAQRVVTVVRGTSGGVATPFEVEDDDVDEDXDSDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRLR 1073          
BLAST of mRNA_C-linearis_contig73.14940.1 vs. uniprot
Match: A0A6H5JKP4_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP4_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 2.180e-76
Identity = 179/359 (49.86%), Postives = 198/359 (55.15%), Query Frame = 0
Query: 1118 PTHFEMFCPNNIAPQLIGKMGMTINRLMKESKAKIVVRPHPDKSGNDVVITGTPAAVK--------------------------------------------------------------HVTKLVGE-FYRSKGCDPTTLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVEDGAWGGELRQLLKVAGCEHHLERFRKDQLDGEVLLMMEREDFERMGVTEVSLTRRVVRALGSRGGRTNFLGVAAGDGVVGRRYCEIRILNGLKVGGGGAAND-DEDSDGLDPDHPDTCKICMDALVDILFLPCAHQCTCSRCGGAFAGKACILCRAEVKKVQKVIRVR 1412
            P+   +    NIAPQLIGK G T+++LMKES+AKIVV+P+PD+SGNDVVITGTP AVK                                                               VT  V E FYRSKGC PT LPP                        XXXXXXXXXXXX         VVEDGAWGGELRQLL+VAGCEHHLERFR+DQLDGEVLLMM+R DFERMGVT                              VG    +IRILN LK  G G  +D DEDSDGLDPDHPDTCKIC+DALVDILFLPCAH CTCSRCG A+ GK CILCR  V KVQ+VI++R
Sbjct:   42 PSPSPLLRAQNIAPQLIGKQGQTVSKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKVSKSRVLGSTLDCCRGCVRVRCLAIPLYFQAVVVGRCDGVGAGCFVVVVNALSLRHPLQCTRRVTMRVEEEFYRSKGCQPTALPPPSSAVAAARKAEGARARPAQPVTGXXXXXXXXXXXX--------VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVT------------------------------VGE---QIRILNALKGSGAGGVDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAHHCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLR 359          
BLAST of mRNA_C-linearis_contig73.14940.1 vs. uniprot
Match: D7FX18_ECTSI (KH domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX18_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 6.140e-65
Identity = 187/408 (45.83%), Postives = 228/408 (55.88%), Query Frame = 0
Query: 1031 AIAADMSLEDRLKKAIERGNAIAIQSIYDEADQTPGAGMKKIKKKCQRWLNKKAGE----EQKLQQATKPAPV----LRAAGAA-GAAATALASQRPTHFEMFCPNNIAPQLIGKMGMTINRLMKESKAKIVVRPHPDKSGNDVVITGTPAAVKHVTKLVGEFYRSKGCDPTTLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------PAV----------VEDGA------------WGG---------------ELRQLLKVAGCEHHLERFRKDQLDGEVLLMMEREDFERMGVTEVSLTRRVVRALGSRGG----RTNFLGVAAGDGVVGRRYCEIRILNGLKVGGGGAANDDE--------DSDGLDPDHPDTCKICMDALVDI 1372
            ++  DMSLE RLKKAIERGNA+A+Q+I+DEADQTPGA MKKIKKKC++WLNKK GE    +Q+L QA +P P     LR AG   G     +A+QRPT +EMFCPN IA Q+IG+ G T+NRLMKES+A+IV++ + DK+G+DVVITG+P AV    +LV +FYRSKG +PT L P  XXXXXXXXXXXXX                                    PA           +  GA            +GG               EL QLL+ A CEHHLERF++DQLDGEVLL MER +F+RMGVTE     R++ AL   G                    R     R+   ++   G  A   E         SDGLDPDHPDTCKICMDALV +
Sbjct:  488 SLVVDMSLEVRLKKAIERGNALAVQAIHDEADQTPGADMKKIKKKCKKWLNKKEGEMREEQQRLLQANQPPPNPALGLRQAGPGFGVPTPPMAAQRPTEYEMFCPNVIAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQAVLTGRRLVEDFYRSKGIEPTLLQPPSXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAGAGPAAAVGMRAPSGAIPQGARPVAQXXXXXXMFGGXXXXXXXXXVDVSGVELPQLLRAARCEHHLERFKRDQLDGEVLLEMERREFDRMGVTEAE-QGRIMSALKHAGDGXXXXXXXXXXXXXXXXXXRENSAQRVAAVVRGASGVMATPVEVEDXXXXXXSDGLDPDHPDTCKICMDALVGL 894          
BLAST of mRNA_C-linearis_contig73.14940.1 vs. uniprot
Match: A0A6H5JGK6_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGK6_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 2.050e-48
Identity = 125/273 (45.79%), Postives = 143/273 (52.38%), Query Frame = 0
Query:   38 GDYLEPPDLSTPCCRCGGGLPLCRRCA------AIGAGIGGAGTNGAGGAEAINLEEAIVCTACARFVCSDPGCSTRCSDKECETLFCSSCRGSLSECSGCLMLHCESTGDPEKDCLLPCEGKPGCRAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAFTEVKGFCEGCNADRCLMXXXXMRPCDKCGHAVSLERLRKSMTPMTAFIEKWSTSGLTRERKEQRQQ---------RPSELPPLPPRSLAMRAEVARRWAAFIA 295
            GDYL PPDLS  C  CGG LPLC RCA      AIG   GG G +G  G E I   EA+ C  CAR VCS P CSTRCS+  CET+FCSSCR SLSECSGCLM HC   GDP+ DCLLPC+G P CR                                                  EGCNADRCL+     RPCD CGH VS +R+R+ M   T FIEKWS   L +  + + +           PSE+   PPRS+A+RAEVA RW +  A
Sbjct:   58 GDYLGPPDLSNACSWCGGRLPLCDRCARAVSFSAIGE-TGGGGGDGVSGDEMI-AAEAVCCCGCARLVCSGPECSTRCSNTSCETVFCSSCRLSLSECSGCLMPHCRRAGDPDTDCLLPCQGHPECR--------------------------------------------------EGCNADRCLLCVMRSRPCDMCGHPVSADRVREHMASTTGFIEKWSKFCLGKNSRRREESVAAVAGASAGPSEVHH-PPRSIALRAEVAHRWMSVAA 277          
BLAST of mRNA_C-linearis_contig73.14940.1 vs. uniprot
Match: D7FX20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX20_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 7.470e-28
Identity = 66/113 (58.41%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   27 TIPCAGCAGTAGDYLEPPDLSTPCCRCGGGLPLCRRCAAIGAGIGGAGTNGAGGAEAINLEE-----AIVCTACARFVCSDPGCSTRCSDKECETLFCSSCRGSLSECSGCLM 134
            TI CAGC G AGDYL PPDLS  C  CGG LPLC  CA         G +G GG + ++++E     A+ C ACAR VCS P CSTRCS+  CE++FCSSCR SLSECSGCLM
Sbjct:   47 TIRCAGCGGAAGDYLGPPDLSNACSWCGGRLPLCDPCARA-VSFSAIGESGGGGGDGVSVDEMIAAEAVCCCACARLVCSGPECSTRCSNMSCESVFCSSCRLSLSECSGCLM 158          
BLAST of mRNA_C-linearis_contig73.14940.1 vs. uniprot
Match: A0A6H5JGL0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGL0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 9.670e-12
Identity = 44/90 (48.89%), Postives = 52/90 (57.78%), Query Frame = 0
Query:   68 AGIGGAGTNGAGGAEAINLEEAIVCTACARFVCSDPGCSTRCSDKECETLFCSSCRGSLSECSGCLMLHCESTGDPEKDCLLPCEGKPGC 157
            AG GG  T  A    +++  EA  C+ C       PG  + C+D  CET  C  C G L ECS CLM  CE TGDPE DCLLPC+G+PGC
Sbjct:   14 AGNGGGHTRRAALGTSLSTSEA--CSMCGSRKTYTPG--SVCAD--CETYACYKCEGPLPECSSCLMSFCEGTGDPETDCLLPCQGQPGC 97          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FX21_ECTSI4.200e-12162.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8V2_9PHAE2.640e-9048.99RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JKP4_9PHAE2.180e-7649.86RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FX18_ECTSI6.140e-6545.83KH domain containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JGK6_9PHAE2.050e-4845.79WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FX20_ECTSI7.470e-2858.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGL0_9PHAE9.670e-1248.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 865..960
NoneNo IPR availableCOILSCoilCoilcoord: 1069..1089
NoneNo IPR availableCOILSCoilCoilcoord: 749..784
NoneNo IPR availableCOILSCoilCoilcoord: 966..986
NoneNo IPR availableCOILSCoilCoilcoord: 994..1014
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 1360..1405
e-value: 1.6E-9
score: 37.4
NoneNo IPR availableGENE3D2.20.70.10coord: 553..625
e-value: 1.3E-7
score: 33.0
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 1118..1181
score: 12.076
IPR004087K Homology domainSMARTSM00322kh_6coord: 1117..1186
e-value: 3.0E-10
score: 50.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1348..1413
e-value: 1.2E-12
score: 49.0
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 1250..1311
e-value: 4.3E-6
score: 28.4
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 1253..1305
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 1122..1181
e-value: 4.8E-10
score: 39.1
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1107..1189
e-value: 1.8E-11
score: 45.5
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 1117..1188
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1362..1399
score: 9.288
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 1249..1305
score: 8.974
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 584..619
score: 10.758
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 582..618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:192030..204942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14940.1mRNA_C-linearis_contig73.14940.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 190801..206134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14940.1 ID=prot_C-linearis_contig73.14940.1|Name=mRNA_C-linearis_contig73.14940.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1415bp
MDHNQVLVRPSPPGLAIDPTAGTGTDTIPCAGCAGTAGDYLEPPDLSTPC
CRCGGGLPLCRRCAAIGAGIGGAGTNGAGGAEAINLEEAIVCTACARFVC
SDPGCSTRCSDKECETLFCSSCRGSLSECSGCLMLHCESTGDPEKDCLLP
CEGKPGCRAEVCRLCESGRCGCEMCSAAVCDSCRKECDVCKTVSCPECLA
FTEVKGFCEGCNADRCLMCLMCMRPCDKCGHAVSLERLRKSMTPMTAFIE
KWSTSGLTRERKEQRQQRPSELPPLPPRSLAMRAEVARRWAAFIAVGTTT
ASSGGAASSAANGAEEQKTANSRDVFRFGGPNEGVGAVAGGGGGGGGGGG
GGGGGGSPPPPAVPAPAPAPAPAAARGAFATGLTKVKQFFGSGSGGAAAE
AAQEKQAPSVAAAAQPKSAEPLADADADADADAAAAAVASAKAAADTART
VLEARLAAGAAGFGGRGGGGGSHARTPLEVVRRFVAATTAHGGIKTSLND
VLNVFTGWVDPVVVELYYYDGSEDIVQTIRQCEEAMEQVVMNEHSSAFSA
AAAAAAASPPPASPLPSSAFGGGGGGGGASSSPPTGQSDWKMYTSPENAG
RAYWHNTKTGQATWEDPHDQSQGAGSRARGAAAAGNKTGCAFSPVSSTSS
NTDDFPSLSPSFASGGRRAASRGRPTQRRHVPRVVKTRPQPGAGACERRG
QPERGDDELRHVRRWPPADAETMLAEAQTALNSIKAVRLPESSLAGLRAA
ATAARLEAAEQLRDEALEKEKEKEKETKEEAAGRGAAAAAPNTTSKPKVE
PKRAALIGGASAAGGGAAGGQQAKAKDGLKRAASANAATAGGSGSKAGAG
GAAVNLEDEMAKVQAEEERKQAPKAKKAARRAEEALEKEERETQEAKARE
EAAARRTAAREAAAAQRKAEAARGEADRIADAKAAMEARVVAAVAAKAKA
EKEAKEAKKAAKRKPKEDAEAKKKQERQQRAERAKAVADAKAANAASEAR
KAGTETEREREEQKAAASAAAAAAAGGGGGAIAADMSLEDRLKKAIERGN
AIAIQSIYDEADQTPGAGMKKIKKKCQRWLNKKAGEEQKLQQATKPAPVL
RAAGAAGAAATALASQRPTHFEMFCPNNIAPQLIGKMGMTINRLMKESKA
KIVVRPHPDKSGNDVVITGTPAAVKHVTKLVGEFYRSKGCDPTTLPPPST
AVPPPSAAASGRARAAGAAGLQGAPPAQPAMSGGGSGGGGPAVVEDGAWG
GELRQLLKVAGCEHHLERFRKDQLDGEVLLMMEREDFERMGVTEVSLTRR
VVRALGSRGGRTNFLGVAAGDGVVGRRYCEIRILNGLKVGGGGAANDDED
SDGLDPDHPDTCKICMDALVDILFLPCAHQCTCSRCGGAFAGKACILCRA
EVKKVQKVIRVRSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR013083Znf_RING/FYVE/PHD
IPR013761SAM/pointed_sf
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf
IPR001841Znf_RING
IPR001660SAM
IPR001202WW_dom
IPR036020WW_dom_sf