mRNA_C-linearis_contig72.14871.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: A0A6H5KL38_9PHAE (COP9 signalosome complex subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL38_9PHAE) HSP 1 Score: 687 bits (1774), Expect = 4.850e-244 Identity = 349/458 (76.20%), Postives = 401/458 (87.55%), Query Frame = 3
Query: 51 MEATLTYCDDLQGIPPGDGSQSSLKAVNDGLTKQGEALQDVGRTFSQTAGREGGGVAAANSPLIAAAMQHIKLASLGSMHLLAAQAEVLTPREVPAFIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGNPPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKVVGDHSLPGAGLGGAAGYSA-WMGDDIGMGD 1421
ME TLT+C DLQG+P D S + LK ++ LTKQG+ALQ+V +TFSQT ++GG VAAANSPLIAAAM+H KLASLGS+HLLAAQAEVLTP+EVPAFIDVT+AFLEHC+W QV +APKHLG+VC+KF QVCISEGRASEALLPLR AA++M D SSLTP+HPEFL CCIAAKCYSLGARF+DD+PIF V+P ATGLTPV FLR+FYYGGIVY G K WK ALDSFL L+T PANVLSSLVVEG+KKM+L++LI SG P LPKY SNSV+RHLK++TS+YEAL + + GD++GLNAAV+AG+EKF+QDGNMGLVKQAV+ALTKRKI +LTHTYITLPLSDISDKVGLAH +DA+ +ILNMVEAGEI AQI PAGTVHFRED + SS MT+RLEADL+STAELTERVR+LEARL+VNP FIQK+VGDHSLPGAGLG AAGYSA W DDIGMGD
Sbjct: 1 METTLTFCADLQGLP-ADASNAQLKTIHGALTKQGDALQEVAKTFSQTTDQDGG-VAAANSPLIAAAMEHTKLASLGSLHLLAAQAEVLTPQEVPAFIDVTLAFLEHCNWHQVTIAPKHLGSVCKKFGQVCISEGRASEALLPLRSAAIKMDGDRSSLTPLHPEFLQCCIAAKCYSLGARFMDDRPIFGVEPVATGLTPVHFLRHFYYGGIVYVGAKQWKDALDSFLMLLTIPANVLSSLVVEGYKKMMLVSLIISGKVPPLPKYASNSVTRHLKSHTSDYEALVSCFQVGDVKGLNAAVVAGSEKFSQDGNMGLVKQAVTALTKRKITELTHTYITLPLSDISDKVGLAHADDAQGYILNMVEAGEICAQIAYPAGTVHFREDTNTLSSTTMTARLEADLRSTAELTERVRKLEARLIVNPVFIQKMVGDHSLPGAGLGAAAGYSASW--DDIGMGD 454
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: A0A0D6QYT4_ARACU (PCI domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QYT4_ARACU) HSP 1 Score: 243 bits (620), Expect = 1.060e-70 Identity = 130/355 (36.62%), Postives = 205/355 (57.75%), Query Frame = 3
Query: 273 SLGSMHLLAAQAEVLTPRE-VPAFIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGNPPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKV 1334
SLG +++L A PRE V F+ + F+ CS +Q+ +AP+ +C+KF++ +A+ PL+ A ++ + LT +HP+FLL C+ AKCY G L++ IF +D P FL Y YYGG+VY G+K + AL+ F IT P L+++ VE +KK +L++LI +G P PKYT V R+LK+ T Y LA + +G I L++ + EKF D N+GLVKQ +S+L KR I +LT TY+TL L DI++ V L AE H+L M++ GEI+A I G V F+ED Y + MT +++ ++ L+ +++ ++ ++ + A++ +V
Sbjct: 56 SLGYLYVLEAHTSCSIPREQVEGFLLIAANFINSCSAEQICIAPEKFTNLCKKFKEQVTDLQVPKQAIFPLQTAVRKLQPSSEHLTSLHPDFLLVCLLAKCYKAGLSILEED-IFEIDQ------PRDFLLYCYYGGMVYIGLKRFSKALEFFQHAITAPMTSLTAITVEAYKKYVLVSLIHTGQVPAFPKYTPAVVQRNLKSCTQPYIELANNYTSGKISVLDSCLNTHMEKFKNDSNLGLVKQVLSSLYKRNIQRLTQTYLTLSLQDIANTVQLETAKQAELHVLQMIQDGEIFATINQKDGMVSFQEDPEQYKTCKMTEHIDSAIRRIMALSRKLKSIDEQVSCDHAYLSRV 403
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: A0A6V7PNK9_ANACO (PCI domain-containing protein n=5 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7PNK9_ANACO) HSP 1 Score: 240 bits (613), Expect = 1.060e-69 Identity = 143/431 (33.18%), Postives = 224/431 (51.97%), Query Frame = 3
Query: 48 AMEATLTYCDDLQGIPPG-DGSQSSLKAVNDGLTKQGEALQDVGRTFSQTAGREGGGVAAANSPLIAAAMQHIKLASLGSMHLLAAQAE-VLTPREVPAFIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGNPPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKV 1334
+MEA + + + L IP S LK D L QG L +PL+ + K SLG +++L A ++ + F+ V F+ CS Q+ +AP VC++ + + + + PLR A ++ + LT IH +FLL CI AK Y G L+D I VD P Y+YYGGI+Y G+K ++ AL+ ++T P L+++ VE +KK +L++LI +G P PKYTS++ R+LKN+T Y L+ +G L A + + EKF D N+GLVKQ +S+L KR I +LT TY+TL L DI++ V L P +AE H+L M++ GEI+A I G V F ED Y + M +++ +Q L++++R ++ ++ +PA++ K+
Sbjct: 3 SMEALVAHIEALSAIPEELPHLHSLLKQSEDALRSQGPGL----------------------APLLLHQLDPSKH-SLGYLYILEAYLSGPISSDQAGGFLLSVVDFINSCSGDQIRLAPDKFIQVCKRLKDQVMQLQVPLQGVAPLRTAIRKLQTSSEQLTTIHSDFLLLCILAKSYKTGLSILEDD-ILEVDQ------PRDLFLYYYYGGIIYIGLKRFRTALECLHNVVTAPMTTLNAIAVEAYKKYILVSLILNGQVPSFPKYTSSTAQRNLKNHTQPYIDLSACYASGKYSDLEAFIQSNVEKFQSDNNLGLVKQVLSSLYKRNIQRLTQTYLTLSLQDIANAVQLKTPKEAEMHVLRMIQDGEIFATINQKDGMVSFHEDPEQYKTCEMAEHIDSTIQRLMALSKKLRSIDEQISCDPAYVSKI 403
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: A0A6A4R162_LUPAL (Putative proteasome component (PCI) domain-containing protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A6A4R162_LUPAL) HSP 1 Score: 238 bits (608), Expect = 6.070e-69 Identity = 132/358 (36.87%), Postives = 199/358 (55.59%), Query Frame = 3
Query: 267 LASLGSMHLLAAQ-AEVLTPREVPAFIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGN-PPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKV 1334
L SLG + +L A A L+ + F+ + F++ CS +Q+ +AP +VC+K + + + P+ A ++ T LTP+HPEFLL C+ +KCY G LDD IF VD P +FYYGG++ G K ++ ALD ++T P + L+++ VE +KK +L++LI G LPKY+S+ R+LKN+ Y A S G I L V A T+KF D N+GLVKQ VS++ KR I +LT TY+TL L DI++ V L P DAE H+L M++ GEIYA I G V F ED Y + M +++ +Q L+ ++ ++ ++ +P ++ KV
Sbjct: 55 LHSLGFLFILDASIAFPLSKPQAELFVPILTTFIDACSVEQIQLAPDKFISVCKKLKDQVVLLEAPIRGVAPMLTAVRKLQVSTERLTPLHPEFLLLCLLSKCYKTGLSILDDD-IFEVDQ------PRDLFLFFYYGGMICIGQKRFQKALDLLHNVVTAPMSTLNAIAVEAYKKYILVSLIRHGQFSTTLPKYSSSVAQRNLKNFCQPYIDFANSYSTGKIAVLEEHVQANTDKFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKDAEMHVLQMIQDGEIYAMINQKDGMVSFLEDPEQYKTCEMIEHIDSSIQRVMALSRKLTTVDEQISCDPMYLSKV 405
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: D8R348_SELML (Uncharacterized protein COP13-1 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R348_SELML) HSP 1 Score: 238 bits (607), Expect = 9.230e-69 Identity = 126/336 (37.50%), Postives = 191/336 (56.85%), Query Frame = 3
Query: 327 EVPAFIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGNPPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKV 1334
E F+ F+ CS +Q+ P ++C K R+ ++ R A+LPL+ A + + LTPIH +FLL C+ +KCY A L+DQ IF +DP TGL P +L Y YYGG+V G+K++ A++ T PA+V++++ VE +KK +L+ LI +G P PKYT + V R+LK Y L T +I L + + E F D N+GL KQ V++L KR I +LT TY+TL L DI+ V L DAE H+L M++ GEI+A I G V F+ED+ Y + M+ RL +++Q L +++ ++ ++ + AF+ KV
Sbjct: 71 EAENFLMSVTNFITVCSPEQIRYCPDKFNSLCRKLREHAMNMHRPIRAVLPLQVAIRKFQPSSEYLTPIHADFLLVCLLSKCYKAAAPILEDQ-IFEIDPKKTGLVPKDYLLYCYYGGMVQIGLKNFLRAMELLQHAFTAPAHVMNAIAVEAYKKYVLVCLIHNGQVPPFPKYTPSIVQRNLKGCCQGYIELVTVYNNRNITDLQRCLTSHEEAFRNDKNLGLAKQVVASLYKRNIQRLTQTYLTLSLQDIAQTVQLESAKDAELHVLQMIQDGEIFATINQKDGMVRFQEDSEQYKTREMSQRLHSEIQKVIRLAKKLTAVDEQVSCDQAFLSKV 405
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: UPI0009010DE7 (COP9 signalosome complex subunit 3-like isoform X1 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009010DE7) HSP 1 Score: 234 bits (598), Expect = 1.960e-67 Identity = 133/370 (35.95%), Postives = 207/370 (55.95%), Query Frame = 3
Query: 231 SPLIAAAMQHIKLASLGSMHLLAAQAEVLTPREVPA-FIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGNPPI-LPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKV 1334
+PL+A H SLG +++L A T +E + + F+ C Q+ +AP+ +VC++F++ + + P+ A ++ + LT +HPEFLL C+ AKCY +G L+D IF VD P F Y YYGG+V G K + AL+ FL ++T P + L+++ VE +KK +L++LI +G PKYTS++ R+LKNY+ Y LA S G I L V +K+ D N+GLV+Q VS++ KR I +LT TY+TL L DI++ V L P +AE H+L M+E GEIYA I G V F ED Y + M +++ +Q L++++ ++ R+ +P+++ KV
Sbjct: 48 APLLA--QLHPSQHSLGYLYILDAGMYAPTSKEQASELVSCAARFINECVADQIRLAPEKFISVCKRFKEQVMLLKEPLRGVGPMLTAIQKLRLSSEQLTTLHPEFLLLCLMAKCYKIGFSILEDD-IFEVDQ------PKDFYLYCYYGGMVCIGQKQFPKALELFLNVVTAPMSTLNAIAVEAYKKYILVSLIQNGQFSTGFPKYTSSAAQRNLKNYSQPYLELANSYNLGKISELETCVQTNKDKYEIDNNLGLVQQVVSSIYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIEDGEIYATINQKDGMVRFLEDPEQYKTCGMIEHIDSSIQRIMMLSKKLTCMDERMSCDPSYLAKV 408
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: A0A328DNT4_9ASTE (PCI domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DNT4_9ASTE) HSP 1 Score: 234 bits (598), Expect = 2.020e-67 Identity = 129/358 (36.03%), Postives = 204/358 (56.98%), Query Frame = 3
Query: 267 LASLGSMHLLAAQAEVLTPREVPAFIDVTVA-FLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGN-PPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKV 1334
L SLG ++LL A P E + V VA F+ C+ Q+ +AP+ +VC++F++ + + + P+ A ++ + LTP+HPEFLL C+ AKCY G FL+D IF VD P F Y YYGG++ G K ++ AL+ F ++T P + L+++ VE +KK +L++L+ +G PKYTS+ R+LKN++ Y LA S G I L V +K+ D N+GLV+Q V+++ KR I +LT TY+TL L DI++ V L +P +AE H+L M+E GEIYA I G V F ED Y + M +++ +Q L++++ ++ + + +++ KV
Sbjct: 59 LHSLGYLYLLDASMSAPIPTEQARGLVVCVATFICECAADQIHLAPEKFISVCKRFKEQVLILRAPLQGVCPMLTAIQKLRLSSEQLTPLHPEFLLLCLLAKCYQTGFSFLEDD-IFEVDQ------PKDFFLYCYYGGMICIGQKEFRKALELFHNVVTAPMSTLNAIAVEAYKKYILVSLVQNGQFSTSFPKYTSSVAQRNLKNHSQPYLELANSYSLGKISELEICVQTNKDKYENDNNLGLVQQVVASIHKRNIQRLTQTYLTLSLQDIANAVQLRNPKEAEMHVLQMIEDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRMMTLSKKLTSMDEHMSCDLSYLAKV 409
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: A0A2P2KLV9_RHIMU (26S proteasome regulatory subunit S3 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KLV9_RHIMU) HSP 1 Score: 232 bits (592), Expect = 1.330e-66 Identity = 141/433 (32.56%), Postives = 227/433 (52.42%), Query Frame = 3
Query: 45 IAMEATLTYCDDLQGIPPGDGSQSSLKAVNDGLTKQGEALQDVGRTFSQTAGREGGGVAAANSPLIAAAMQHIK--LASLGSMHLLAAQAEVLTPRE-VPAFIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGN-PPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQK 1331
+AM + +QG+ GS S + A++D L + ++L++ ++ + + H+ L SLG ++ L A P + V + +T F+ C+ +Q+ +AP VC+KF++ + + PL A ++ LT +HP+FL C+ AKCY +G L D IF VD P Y YYGG++ G KH++ AL+ ++T P + ++++ VE +KK +L++LI G LPKYTS++ R+LKN+ Y LATS +G I L A V EKF D N+GLVKQ VS++ KR I +LT TY+TL L DI++ V L P +AE H+L M++ GEIYA I G V F ED Y + + R++ +Q L++++ ++ + +P+++ K
Sbjct: 1 MAMNTAESLVTQIQGL---SGSASDISALHDCLKQAEDSLRN-------------------DALRLVPLLNHLDPALHSLGYLYFLDACTSGAVPEDLVEELVLITARFITSCAAEQICLAPTKFIVVCKKFKEQAVLRAPI-RGVAPLLAAVRKLQSSPEHLTTLHPDFLQLCLLAKCYKVGLTILKDD-IFEVDQ------PRDLFLYCYYGGMICIGQKHFQKALELLHNVVTAPMSTINAIAVEAYKKYVLVSLIQHGQFSTSLPKYTSSAAQRNLKNFCMPYVELATSYGSGKIAELEACVQTNREKFESDKNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNGPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPEQYKTCEIIERIDFSIQRIMALSKKLTTMDELVSCDPSYLAK 403
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: A0A4S8J3X2_MUSBA (PCI domain-containing protein n=2 Tax=Musa TaxID=4640 RepID=A0A4S8J3X2_MUSBA) HSP 1 Score: 231 bits (588), Expect = 4.960e-66 Identity = 123/355 (34.65%), Postives = 196/355 (55.21%), Query Frame = 3
Query: 273 SLGSMHLLAAQAEVLTPREVPA-FIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGNPPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKV 1334
+LG + LL A + RE F+ V F+ CS +Q+ +AP+ +VC+ F+ + + ++PLR A ++ + LT +H ++LL C+ AKCY G LDD IF VD P Y YYGG++ G+K ++ A + +IT P L+++ VE +KK +L+++I SG P+ PKYTS++ R+LK++T Y LA G L + EKF D N+GLVKQ +S+L KR I +LT TY+TL L DI++ L P +AE H+L M++ GEI+A I G V F ED Y + M +++ + L++++ L+ + +PA++ ++
Sbjct: 57 TLGYLFLLEAYSSDPVCREQDGDFLLSIVEFINSCSAEQIRLAPEKFISVCKSFKDKVMQLQVPIQGIVPLRTAIRKLQASSEQLTTLHSDYLLLCLLAKCYKAGLSILDDD-IFEVDQ------PRDLFLYCYYGGMINIGLKRYRKAWECLHNVITAPMTTLNAIAVEAYKKYILVSIILSGQVPLFPKYTSSTAQRNLKSHTQPYVDLANCYATGTFSELEGCIQTNLEKFQSDSNLGLVKQVLSSLYKRNIQRLTQTYLTLSLQDIANAAQLKTPREAEMHVLQMIQDGEIFATINQKDGMVSFHEDPEQYKTCGMIEHIDSSIHRLMALSKKLGSLDEHMSCDPAYLTRI 404
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Match: A0A2R6XR65_MARPO (PCI domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XR65_MARPO) HSP 1 Score: 231 bits (588), Expect = 6.140e-66 Identity = 125/355 (35.21%), Postives = 201/355 (56.62%), Query Frame = 3
Query: 273 SLGSMHLLAAQAE-VLTPREVPAFIDVTVAFLEHCSWQQVAVAPKHLGTVCEKFRQVCISEGRASEALLPLRGAALEMGRDTSSLTPIHPEFLLCCIAAKCYSLGARFLDDQPIFSVDPAATGLTPVQFLRYFYYGGIVYTGVKHWKHALDSFLTLITTPANVLSSLVVEGHKKMLLINLITSGNPPILPKYTSNSVSRHLKNYTSEYEALATSCKAGDIEGLNAAVIAGTEKFNQDGNMGLVKQAVSALTKRKIMQLTHTYITLPLSDISDKVGLAHPNDAERHILNMVEAGEIYAQITSPAGTVHFREDAHMYSSAAMTSRLEADLQSTAELTERVRRLEARLMVNPAFIQKV 1334
SLG ++LL A + L+ + +F+ FL CS Q+ +A +C + + + S A+LPL A + + LTP+H ++LL C+ +KCY G L+D IF +D TGL P FL + YYGG++Y G+K + AL+ F IT PA VL+++ + +KK +L+ LI +G P PKYT + V R+LK+ +Y LA + +I + V A + F D N+GL Q +++L KR I +LT TY+TL L DI+D V L P +AE HIL M++ GEI+A I G V F+ED Y++ M + L++++Q L +++ ++ +++ + ++ K+
Sbjct: 56 SLGYLYLLEAHSSGTLSKEQAGSFVVAASNFLTVCSADQIRLAIDKFNILCRRLKDQAMQMMEPSCAILPLYAAIRKSQPSSEYLTPLHADYLLLCLLSKCYKAGLNILEDD-IFEIDQKRTGLMPRDFLLHCYYGGMLYIGLKRFGKALEFFQHAITAPATVLNAITIAAYKKFVLVCLIHNGQVPPFPKYTPSVVQRNLKSCAQDYFDLANLYNSRNIMDVKRCVNAHEDVFKNDTNLGLANQVIASLYKRNIQRLTQTYLTLSLQDIADTVQLDGPKEAELHILQMIQDGEIFATINQKDGMVSFQEDPEQYNTRKMANMLDSEIQHIIRLAKKLSSVDEQVLCDQNYLSKI 409 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig72.14871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig72.14871.1 >prot_C-linearis_contig72.14871.1 ID=prot_C-linearis_contig72.14871.1|Name=mRNA_C-linearis_contig72.14871.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=458bp MEATLTYCDDLQGIPPGDGSQSSLKAVNDGLTKQGEALQDVGRTFSQTAGback to top mRNA from alignment at C-linearis_contig72:279114..283139+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig72.14871.1 ID=mRNA_C-linearis_contig72.14871.1|Name=mRNA_C-linearis_contig72.14871.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4026bp|location=Sequence derived from alignment at C-linearis_contig72:279114..283139+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig72:279114..283139+ >mRNA_C-linearis_contig72.14871.1 ID=mRNA_C-linearis_contig72.14871.1|Name=mRNA_C-linearis_contig72.14871.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2748bp|location=Sequence derived from alignment at C-linearis_contig72:279114..283139+ (Chordaria linearis ClinC8C monoicous)back to top |