mRNA_C-linearis_contig7.14476.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: D7FZC2_ECTSI (Similar to Imprinted and ancient n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC2_ECTSI) HSP 1 Score: 348 bits (894), Expect = 4.370e-117 Identity = 196/306 (64.05%), Postives = 225/306 (73.53%), Query Frame = 1
Query: 34 MGRHDDEISPEEREENAAAQAEEIEALEAIYGDTCCEIDSSAASAAPELRIRVSEMPLVSLHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRDLLSRTDCDSAPAAAADDDEDGRRFEVLGKGEEEEGEPLEAEVGLEEDVEVVHGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLVQCGATRAGSE 951
MG ++S +ERE N +AQ EE+EALEAIYG+ + SAAS P+LRIRVSE+PLVSLHLRLP GYPSRDFPE++IKAPG+ R ++R+ + P+ G +T+ L +A A D+DE+G GEE PLEAE+ EE VE+ HGQAFTDRKSTFQAHLARVSSE+QV WVRRRLMENGK+ARATHNVAAWRVWDE RGVQLHDNDDDGESAAGSRLAHMLAITGAQNV+VVVSRWYGGIHLGPDRFKHINNAARELLV CGAT+A +E
Sbjct: 1 MGNDSGDLSVQEREANVSAQLEELEALEAIYGEGYEAVRGSAAS--PQLRIRVSEIPLVSLHLRLPVGYPSRDFPELEIKAPGLGQAARRKIREDYT-----------SGSPAADGGDNNDGDEQTVSSL-------TATAGKFDEDEEG--------GEE----PLEAELPAEEYVEIFHGQAFTDRKSTFQAHLARVSSESQVTWVRRRLMENGKVARATHNVAAWRVWDEARGVQLHDNDDDGESAAGSRLAHMLAITGAQNVVVVVSRWYGGIHLGPDRFKHINNAARELLVYCGATKADAE 274
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: A0A6H5J932_9PHAE (RWD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J932_9PHAE) HSP 1 Score: 298 bits (762), Expect = 1.100e-97 Identity = 166/257 (64.59%), Postives = 192/257 (74.71%), Query Frame = 1
Query: 34 MGRHDDEISPEEREENAAAQAEEIEALEAIYGDTCCEIDSSAASAAPELRIRVSEMPLVSLHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRDLLSRTDCDS-APAAAADDDEDGRRFEV------LGKGEEEEG---EPLEAEVGLEEDVEVVHGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGE 774
MG ++S +E+E N +AQ EE+EALEAIYG+ + S AS P+LRIRVSE+PLVSLHLRLP GYPSRDFPE++IKAPG+ R +LR+ALLP + KPSP GTVV+FDWVETLRDLLSRTD S +PAA DD DG V GK +E+E EPLEAE+ EE +E+ HGQAFTDRKSTFQAHLARVSSE+QV VRRRLMENGK+ARATHNVAAWRVWDE RGVQLHDNDDDG+
Sbjct: 1 MGNDIGDLSVQEKEANVSAQLEELEALEAIYGEGYEAVGGSTAS--PQLRIRVSEIPLVSLHLRLPVGYPSRDFPELEIKAPGLGQAARRKLREALLPSASPSSEAVEVAKPSPGGTVVVFDWVETLRDLLSRTDYTSGSPAADGGDDNDGDETTVSTLPATTGKFDEDEEAGEEPLEAELPAEEYMEIFHGQAFTDRKSTFQAHLARVSSESQVTRVRRRLMENGKVARATHNVAAWRVWDEDRGVQLHDNDDDGK 255
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: A7RSN5_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RSN5_NEMVE) HSP 1 Score: 192 bits (488), Expect = 1.220e-55 Identity = 125/304 (41.12%), Postives = 165/304 (54.28%), Query Frame = 1
Query: 73 EENAAAQAEEIEALEAIYGDTCCEIDSSAASAAPELRIRVSEMPLVSL--HLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRDLLSR----------------TDCDSAPAAAADDDEDGRRFEVLGKGEEEEGEPLEAEVGLEEDVEVVHGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLVQCG 930
+EN Q EE+EAL AIYG+ ID S S E+RI+ PL SL L LP YPS+ P +I + + E + L K Q G +V++ WVE LR+++ TD D A D G +F+ K L+A +E ++HG+ FT+RKSTFQ+HLA V+ E +V + L N K+A ATHN+ A+R+++E R + D DDDGESAAGSRL H+L I +NV+VVVSRWYGGI LGPDRFKHINN+AREL+ G
Sbjct: 7 DENLVRQCEEVEALSAIYGEDFASIDES--SRMYEIRIKSENDPLYSLTMQLLLPPQYPSQAPPVFEIHSVWMTSVEMREAMEGLYDIYKENQ-----------GEIVLYQWVEKLREMVDEKVKEKQKEETTHTVYPTD-DKGFEATTSKDNSGSKFDYNSKN------VLDASSSIE----IIHGEPFTERKSTFQSHLAFVTKEAEVREMLHELKLNKKVAHATHNIMAYRIYNEERDAFIQDCDDDGESAAGSRLLHLLEILQVKNVVVVVSRWYGGILLGPDRFKHINNSARELIKSVG 286
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: A0A7S1XJK1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJK1_9STRA) HSP 1 Score: 190 bits (483), Expect = 5.890e-55 Identity = 128/309 (41.42%), Postives = 166/309 (53.72%), Query Frame = 1
Query: 73 EENAAAQAEEIEALEAIYGDTCCEIDSSAASAAPELRI----------RVSEMPLVSLHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRDLL-----SRTDCDSAPAAAADDDEDGRRFEVLGKGEEEEGEPLEAEVGLEEDVEVVHGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLVQCGATRAGSEG 954
+E+ Q E+EAL AI+ D + + LR+ ++ L P YPS P+ ++ + R E R L +AE VV++ W+E LR L +R + +A AA E +EV+ E+VHG+ FTDR+STFQAH A VSSE +V VR LM+NGKIARATHN+AAWR++DE R V +HDNDDDGE+AAG R+A +LA+TGA NV+VVVSRWYGGIHLGPDRFKHINNAAR +L G G +G
Sbjct: 24 DEDKEEQEAELEALLAIFDDGELSVHNEGGRPRHSLRVLPEGDEDTAAXXXXXDVLLLDWWYPVDYPSVSAPDYSLRL----LSGRSEPRLTAL---RAELDELWVDADH---QVVLYTWIEHLRSQLDDILPARQEAPTAAPPAAP--EPAAIYEVVVLP------------------EIVHGEPFTDRRSTFQAHAAVVSSEAEVFAVREALMQNGKIARATHNIAAWRLFDEHRDVVIHDNDDDGETAAGGRMAELLALTGASNVVVVVSRWYGGIHLGPDRFKHINNAARAILEHMGIIAGGKKG 302
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: A0A6P7M308_BETSP (protein IMPACT n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7M308_BETSP) HSP 1 Score: 187 bits (475), Expect = 1.320e-53 Identity = 129/312 (41.35%), Postives = 166/312 (53.21%), Query Frame = 1
Query: 49 DEISPEEREENAAAQAEEIEALEAIYGDTCCEIDSSAASAAPELRIRVSEMPLVS-LHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRDLLSRTDCDSAPAAAA-----------DDDEDGRRFEVLGKGEEEEGEPLEAEVGL--------EEDVEVVHGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLVQ 924
D I PE E + AQ EE+EAL +IYGD C ID ++ ++ + E L + L + LP+ YPSR P I A + R +L +L G +++ WVE +R+ L C S+ AA D DED F LG L+AE+ EE + HG A TDR+STFQ HLA V + QV V +LMEN KIA ATHN+ A+R+ E RG L D +DDGE+AAG RL H+L I +NV+VVVSRWYGG+ LGPDRFKHINN AR +LV+
Sbjct: 3 DVIGPE-NEADLQAQIEEVEALSSIYGDEWCVIDEASRIFCIKISNDLEEPELTARLQIILPSDYPSRAPPIYQINAAWLRGPERAKLANSLEDLYVEHA-----------GDSILYLWVEKIREFLLER-CQSSETAAQPEMVNMTTEEEDHDEDAPDFRTLG---------LDAELAQLLMDPSHDEEVPPIKHGDAITDRRSTFQPHLAPVVTPRQVKMVLEKLMENKKIASATHNIYAYRILCEDRGGFLQDCEDDGETAAGGRLLHLLQILDVRNVMVVVSRWYGGVLLGPDRFKHINNCARNILVE 292
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: UPI0014559C3A (protein IMPACT-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014559C3A) HSP 1 Score: 181 bits (458), Expect = 2.740e-51 Identity = 128/306 (41.83%), Postives = 170/306 (55.56%), Query Frame = 1
Query: 64 EEREENAAAQAEEIEALEAIYGDTCCEIDSS------AASAAPELRIRVSEMPLVSLHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRD-LLSRTD-CDSAPAAAADDDEDGRRFEVLGKGEEEEGEPLEAEVGLEEDVEVV--------HGQAFTDRKSTFQAHLAR-VSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLVQCG 930
E E+N QA+EIEAL AIYGD C +D S A S E ++ + + L + LP+ YPS PE I AP + R E+ L EQ G V++ VE LR+ L+ RT AP A +DE E L E +E+ V +V+ HG+ +DR+STFQAHLA +S+ QVA VRR+L+EN KIA A HN+ A+R++ E RG+ L D D+DGE+AAG RL H++ I +NV+V+V+RW+GGI LGPDRFKHINNAAR L + G
Sbjct: 2 EAEEDNLTRQADEIEALTAIYGDEWCVVDESNRIYCIAVSNQEEKQLNLK----ICLQVLLPSEYPSTSPPEYQINAPWLKDAERQEVNHGL------EQ-----VCSDNSGESVLYLLVECLREHLVHRTHKAQHAPPEDAFEDE-----ESLISSE------VESNVIFSSSADVLDCEIPPILHGEPISDRRSTFQAHLAAPISTVQQVAQVRRKLLENRKIANACHNIQAYRIYCEDRGIFLQDCDNDGEAAAGPRLLHLMEILDVRNVVVIVTRWFGGIMLGPDRFKHINNAARNTLQEHG 281
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: A0A3Q2Q4N3_FUNHE (Impact RWD domain protein n=6 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2Q4N3_FUNHE) HSP 1 Score: 181 bits (458), Expect = 4.350e-51 Identity = 122/304 (40.13%), Postives = 164/304 (53.95%), Query Frame = 1
Query: 49 DEISPEEREENAAAQAEEIEALEAIYGDTCCEIDSSAASAAPELRIRVSEMPLVS-LHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRD-LLSRTDCDSAPAAA----------ADDDEDGRRFEVLGKGEEEEGEPLEAEVGLEEDVEVVHGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLVQ 924
D I+PE EE+ AQ EE+EAL +IYGD C ID ++ ++ E L + L + LP YPS P I A + + R +L +L G +++ WVE +RD L+ ++ C A +DDED F +LG E+ + EE V HG TDR+STFQ HLA V + QV V +L EN KIA ATHN+ A+R++ E + L D +DDGE+AAG R+ H+L I +NV+VVVSRWYGGI LGPDRFKHINN AR +L++
Sbjct: 3 DIINPE-NEEDLQAQIEEVEALSSIYGDEWCVIDEASRIFCIKISSDAEEQKLTACLQIILPPDYPSAAPPIYQINAAWLRGSERAKLANSLED-----------IYVEHAGESILYLWVERIRDFLVEKSHCSEAVVQQEEVNRTAEEEVEDDEDAPDFSILGV---EKAHLFMDQPNDEEMPPVKHGSPITDRRSTFQPHLAPVVTPRQVKMVLEKLYENKKIASATHNIYAYRIYCEDKHSFLQDCEDDGETAAGGRVLHLLQILDVRNVMVVVSRWYGGILLGPDRFKHINNCARNILME 291
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: A0A3Q2ZQS2_KRYMA (Impact RWD domain protein n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q2ZQS2_KRYMA) HSP 1 Score: 180 bits (456), Expect = 9.110e-51 Identity = 120/295 (40.68%), Postives = 161/295 (54.58%), Query Frame = 1
Query: 91 QAEEIEALEAIYGDTCCEIDSSAASAAPELRIRVSEMPLVS-LHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRDLLSRTDCDSAPA-----------AAADDDEDGRRFEVLGKGEEEEGEPLEAEVGLEEDVEVV-HGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLVQCGAT 936
Q EE+EAL +IYGD C ID ++ ++ + E L + L + LP YPS P I A + + R +L +L G +++ WVE +RD L C S +DDED F L +G E+ PL ++ +E++ + HG TDR+STFQAHLA V + QV V +L EN KIA ATHN+ A+R++ E + L D +DDGE+AAG RL H+L I +NV+VVVSRWYGGI LGPDRFKHINN AR +LV+ G T
Sbjct: 16 QIEEVEALSSIYGDEWCVIDEASRIFCIKISNDIEEPKLTACLQIILPPDYPSAAPPIYQINAAWLRGSERAKLANSLED-----------IYVEHAGESLLYLWVEKIRDFLVEKSCSSEAVDPPGKVNMTAEEEMEDDEDAPDFIAL-RGSTEKA-PLFLDLANDEEIPPIKHGNTVTDRRSTFQAHLAPVVTPRQVKTVLEKLYENKKIASATHNIYAYRIYREDKHSFLQDCEDDGETAAGGRLLHLLQILDVRNVMVVVSRWYGGILLGPDRFKHINNCARNILVEEGCT 297
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: UPI00148FC6CD (protein IMPACT n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FC6CD) HSP 1 Score: 179 bits (455), Expect = 1.250e-50 Identity = 123/307 (40.07%), Postives = 166/307 (54.07%), Query Frame = 1
Query: 49 DEISPEEREENAAAQAEEIEALEAIYGDTCCEIDSSAASAAPELRIRVSEMPLVS-LHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRDLL----------SRTDCDSAPAAAADDDEDGRRFEVLGKGEEEEGEPLEAEVGLEEDVEVVHGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLVQCGAT 936
D I+PE EE+ AQ EE+EAL AIYGD C ID ++ ++ + E L + L + LP YPS P I A + + EL ++L G +++ WVE +R+ L ++ + + A DDDE+ F L + E + G EE + HG TDR+STFQ H+A V + QV V +L EN KIA ATHN+ A+R++ E + L D +DDGE+AAG RL H+L I +NV+VVVSRWYGGI LGPDRFKHINN AR +LV+ G T
Sbjct: 3 DIITPE-NEEDLQAQIEEVEALSAIYGDEWCVIDEASRIFCIKISNGLDEPKLTACLQIILPPDYPSTAPPIYQINAAWLRGPEKTELAESLEDLYVEHA-----------GESILYLWVERIREFLVEKSPSLEAVNQPEPVNMTAEEDDDDEEVPDFRTL-RLNTENAHLFVQDAGGEEPPPIKHGDTITDRRSTFQPHVAPVVTPRQVKTVLEKLYENKKIASATHNIYAYRIYCEDKNSFLQDCEDDGETAAGGRLLHLLQILDVRNVMVVVSRWYGGILLGPDRFKHINNCARNILVEEGYT 296
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Match: UPI00143DD6F1 (protein IMPACT-like n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143DD6F1) HSP 1 Score: 177 bits (450), Expect = 2.240e-50 Identity = 110/282 (39.01%), Postives = 161/282 (57.09%), Query Frame = 1
Query: 76 ENAAAQAEEIEALEAIYGDTCCEIDSSAASAAPELRIRVSEMPLVSLHLRLPAGYPSRDFPEVDIKAPGIAHTTRDELRQALLPQGKAEQQPRGATKPSPRGTVVIFDWVETLRDLLSRTDCDSAPAAAADDDEDGRRFEVLGKGEEEEGEPLEAEVGLEEDVEVVHGQAFTDRKSTFQAHLARVSSENQVAWVRRRLMENGKIARATHNVAAWRVWDELRGVQLHDNDDDGESAAGSRLAHMLAITGAQNVLVVVSRWYGGIHLGPDRFKHINNAARELLV 921
EN + Q +EIEAL AIYG+ D S + ++I+ +E VSL+ +LP YPS P +I AP + ++ + LR L S G ++F W+E +R+ L + +++P + D E+ +E P+ + + E +++HG+ DRKS+FQ H A + S QV V +LMEN KIA ATHN+ A+R+ E + D +DDGE+ AG RL H+L I A+NV+VVV+RWYGG+HLGPDRF+HINNAAR++L
Sbjct: 4 ENLSKQIDEIEALSAIYGEDWQTEDES--NRVYSIKIKDNEN-YVSLYFKLPTDYPSSSPPSYEISAPHLDNSKKMHLRNLL-----------DEAYLSNIGQSILFQWIEVVREDLQENNNEASPDESLLDPTFDHSIEI------QEISPIHSAIE-NECPKIIHGEVILDRKSSFQGHAAILVSVEQVKQVVDKLMENRKIAHATHNIYAYRIHREDSNSFIQDCEDDGETQAGGRLLHLLQIVDAKNVIVVVTRWYGGVHLGPDRFRHINNAARQVLT 264 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig7.14476.1 >prot_C-linearis_contig7.14476.1 ID=prot_C-linearis_contig7.14476.1|Name=mRNA_C-linearis_contig7.14476.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=326bp AIVISLLRLATMGRHDDEISPEEREENAAAQAEEIEALEAIYGDTCCEIDback to top mRNA from alignment at C-linearis_contig7:2382599..2386341- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig7.14476.1 ID=mRNA_C-linearis_contig7.14476.1|Name=mRNA_C-linearis_contig7.14476.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3743bp|location=Sequence derived from alignment at C-linearis_contig7:2382599..2386341- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig7:2382599..2386341- >mRNA_C-linearis_contig7.14476.1 ID=mRNA_C-linearis_contig7.14476.1|Name=mRNA_C-linearis_contig7.14476.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at C-linearis_contig7:2382599..2386341- (Chordaria linearis ClinC8C monoicous)back to top |