mRNA_C-linearis_contig7.14465.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig7.14465.1
Unique NamemRNA_C-linearis_contig7.14465.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: D7G0N0_ECTSI (Enkurin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N0_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 2.590e-118
Identity = 185/241 (76.76%), Postives = 197/241 (81.74%), Query Frame = 1
Query:   67 AESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSR 789
            AESIYN+LP +KEET+KPPMYKATFDHSRK+  STFDQRKAKG MFGIKEGKRS EPR+FLRVGEG EARRRAGKRPELPKI H   GSGG             R  G  G++RGLQ+LP RMKPPVPRR E PTMGLHSAKNFVTSNAVE ILAVP NRRRPPIDYLKKEDFGRVPDYL  VQAEVRAENEMVEEFVREQMGIS IA+      +  +PSEEQAELVDKLKAKWD+VN R
Sbjct:    2 AESIYNLLPEIKEETVKPPMYKATFDHSRKVPYSTFDQRKAKGGMFGIKEGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSSAGWASR--GPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEE----IPEMPSEEQAELVDKLKAKWDDVNCR 236          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A835YSE5_9STRA (Enkurin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE5_9STRA)

HSP 1 Score: 158 bits (400), Expect = 8.390e-44
Identity = 105/284 (36.97%), Postives = 144/284 (50.70%), Query Frame = 1
Query:   64 GAESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEHGRMAAKARLEGELDDIEADLSKLTKGPVAV 915
            G E+I+N+LPR + +  KPP Y++ FD    +  STF  +   G ++G ++G  S +P  +L+ G G                      +GG            +R       ERG  +     K  VP  +E P MG+ + KNF+T+NAV AILAVP  R  P IDYL KED+G+VP YLG ++ EV                               +P +E+ EL+D LK+KWD VN+RYQ+L HQTFFE GR+  K  LE  LD IEAD+ K+ KGP+ V
Sbjct:    5 GEETIFNLLPREEVKAEKPPRYRSLFDPKSPVPYSTF--KNTGGGVYGKRDGG-SHKPDVYLKRGTGS---------------------AGG--------PSHTVRSTPEKRPERGEDL----RKAAVPLAKERPVMGVKADKNFITANAVNAILAVPKTRTPPTIDYLAKEDYGKVPAYLGQIKEEVEP-----------------------------MPEDERLELLDALKSKWDAVNARYQKLCHQTFFERGRLEQKKSLEKMLDAIEADIEKIGKGPIMV 223          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A225WDZ9_9STRA (Enkurin domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDZ9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.200e-39
Identity = 107/292 (36.64%), Postives = 153/292 (52.40%), Query Frame = 1
Query:   70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEPRNFLRVGEGIE---ARRRAGKRPELPKISHF---GSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNR---RRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTKGPVAV 915
            E IYN++P+V  E +KP  Y++ FD   K+Q +        G+ FG++ GK  +E  N L   + +E   + R  G+ P  P    F   G  S              +     AG        P   +PPV +R++ P MGL SAKN++T+NAVE ILA+P NR   R     Y+KKEDFG+VP YLG V+ E+  EN M+EEFVR+   +    +      +  +   E+  LVD LK+KWD VN++YQ+L H   F+  G++  K   E ELD +E D+  L KG V +
Sbjct:    5 ECIYNLIPKVHVEPVKPERYRSRFDP--KVQPT--------GTTFGVR-GKTKLEGAN-LGAAQKMEKPASARGFGRLPAKPDPKSFTRKGERSATAVVSRKRDDELIVVFDSSAGKFN----YPGPSRPPVVKRDDKPIMGLKSAKNYITANAVETILAIPGNRARVRNEQPQYMKKEDFGQVPRYLGQVKDEIERENSMIEEFVRQNHDLM---DEENRDRVEDMDENERLALVDALKSKWDHVNAKYQKLCHNVVFDTLGKVRRKETFEKELDQLEKDIQLLEKGHVVI 277          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A067BZX0_SAPPC (Enkurin domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BZX0_SAPPC)

HSP 1 Score: 145 bits (365), Expect = 4.100e-38
Identity = 107/297 (36.03%), Postives = 148/297 (49.83%), Query Frame = 1
Query:   70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFD---QRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRM------KPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRR----PPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFE-HGRMAAKARLEGELDDIEADLSKLTKGPVAVV 918
            E IYN++P+V     KP  Y +T D   +   STF    + K  GS  G ++ K   E                 GK PE P    F                  ++++    +    +  PTR       K  V + +E P MGL ++KNF+T+NAVEAIL VP NR R    PP+ Y  K DFG+VP+YLG V+ E+  ENEM+EEFVR+   I    E +       L  +E+A+L+  LKAKWD VN +YQ+L H   F+  G++  K   E EL  +E D+  L+KG VA+V
Sbjct:    5 ECIYNLIPKVVVAPEKPKRYHSTHDPQTQPTASTFGLHGKTKLLGSNLGPEKPKSPPEKAKTF------------GKLPEQPNPKDF------------------IKKQSKCKMP---ESKPTRFNYNGPKKAAVVKADEKPVMGLKTSKNFITANAVEAILDVPGNRARAKKEPPV-YRHKPDFGKVPEYLGEVKQEIEQENEMIEEFVRQNKNILADQEPKVEP----LDDDERAKLISALKAKWDHVNQKYQKLCHNVSFDTQGKVRRKETYEKELTQLEKDIELLSKGGVAIV 263          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: K3W8L4_GLOUD (Enkurin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8L4_GLOUD)

HSP 1 Score: 144 bits (364), Expect = 6.730e-38
Identity = 102/302 (33.77%), Postives = 143/302 (47.35%), Query Frame = 1
Query:   70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFD----------------QRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRP---PIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTKGPVAV 915
            E I+N++P+V  + +KP  Y++  D   +   S+F                 + +  GS  G        +P+ F++ G+       A K+P   K ++ GS                                    KP + +R+E P MGL SAKNFVT+NAVE ILAVP  R R    P  Y KKED+G+VP YLGLV+ E+  EN M+EEFVR+          R       +   E+ ELV+ LKAKWD VNS+YQ+L H   F+  G++  K   E EL  +E D+  L KG V +
Sbjct:    5 ECIFNLIPKVVMQPVKPERYRSKHDPKVEPTGSSFGVHGTTKLVGSNLGEVGRMEKPGSAKGFGRVPAKPDPKEFIKKGDRCSTTVDASKKPS--KFTYSGSA-----------------------------------KPTIVKRDEKPIMGLKSAKNFVTANAVETILAVPGTRARAKNEPPQYTKKEDYGKVPRYLGLVKDEIERENTMIEEFVRQNKNFIEEESGRAEP----MDERERIELVNALKAKWDHVNSKYQKLCHNVVFDTLGKVRRKETFEKELTQLEKDIQLLEKGHVVI 265          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A8K1FHD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHD5_PYTOL)

HSP 1 Score: 142 bits (358), Expect = 5.440e-37
Identity = 110/297 (37.04%), Postives = 148/297 (49.83%), Query Frame = 1
Query:   70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQIL-----PTRM------KPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRR---PPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTKGPVAV 915
            E IYN++P+V     KP  Y++  D S              GS FG+  GK  +   N   VG+  +  RRAG +               +G            +KG    ER    +     PT+       +P V +R+E P MGL S+KNFVT+NAVEAILAVP  R R    P  Y+KKED+G+VP YL  V+ E+  ENEM+EEFVR+   I    E  +   +      E+  LVD LKAKWD VN++YQ+L H   F+  G++  K   E EL  +E D+  L+KG V V
Sbjct:    5 ECIYNLIPKVVVAPAKPERYRSKHDPSVNPT----------GSTFGL-HGKTRLIGSN---VGDDTKVDRRAGAKT--------------IGRSSDKPDPKGFTKKG----ERCSTTVDPAKKPTKFDYDGPKRPSVVKRDEKPIMGLKSSKNFVTANAVEAILAVPGTRARVTREPPQYVKKEDYGQVPKYLNQVKDEIERENEMIEEFVRQNKNIMEEDEGGRAEPM---DERERKHLVDALKAKWDHVNAKYQKLCHNVVFDTLGKVRRKETFEKELTQLEKDIELLSKGQVVV 266          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A7S2FLR5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLR5_9STRA)

HSP 1 Score: 141 bits (356), Expect = 7.130e-37
Identity = 101/287 (35.19%), Postives = 144/287 (50.17%), Query Frame = 1
Query:   70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQR---KAKGSMFGIKEGKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTK-GPVAV 915
            ESIYN++P    E  KPPMY++  D S  +  STF      +  G+    K G  +  P N          +R  G   ELP  + F                               +      KP VP+ E+ P MG+ +AKNF+T+NAVEAIL VP        DYL K D+G+VP+YLG V+ E+R EN+M++ +V E MG +  A       L+ + + E++ELV  LK KWD VN++YQ++ H    +  G++  K  +E EL  IEAD+ +L + GPV V
Sbjct:    4 ESIYNLVPEQYVEQPKPPMYRSQHDPSAPVTGSTFGTHGTTQLHGAGIVKKRGAATFGPSNKTNPNPQTYLKR--GAPLELPAPTAF-------------------------------KYRDASRKPSVPKVEDRPVMGIQTAKNFITANAVEAILQVPQGLGETEPDYLAKADYGKVPEYLGQVKEEIRRENDMIDAYVME-MGRAQGAVEEPGEELIEMSAAERSELVRALKRKWDAVNAKYQKMAHTVKLDTVGKVKRKEGMEKELVQIEADIERLERPGPVYV 256          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: F0YFA4_AURAN (Enkurin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFA4_AURAN)

HSP 1 Score: 138 bits (347), Expect = 8.030e-37
Identity = 74/156 (47.44%), Postives = 107/156 (68.59%), Query Frame = 1
Query:  436 KPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTK 900
            K  VPRR E P MGL ++KNF+T+NAVEAIL VPT +     DYLKK D+ +VP YLG V+ E+R ENEM++ +V+EQMG++T  E +++ + L L  +E++ L+  LK KWD VN++YQ++ H    +  G++  K  +E EL  +EAD+ KL K
Sbjct:    1 KSAVPRRTEKPVMGLKTSKNFITANAVEAILQVPTVKYTAEPDYLKKADYAQVPAYLGQVKEEIRRENEMIDAYVKEQMGLNT--EEKEDLSEL-LADDERSRLISALKRKWDAVNAKYQKMTHNVNLDTVGKVKRKESMEKELKQLEADIGKLEK 153          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: A0A662XIL3_9STRA (Enkurin domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIL3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.450e-37
Identity = 106/302 (35.10%), Postives = 145/302 (48.01%), Query Frame = 1
Query:   70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQR---KAKGSMFGIKE--GKRSM-----------EPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRR---PPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFEH-GRMAAKARLEGELDDIEADLSKLTKGPVAV 915
            E IYN++PR + + +KP  Y++ FD   +   STF  R   K +G+  G  E   K S            +P++F+R GE       + KR   P      +G                                   KP V R++E P MGL SAKNFVT+NAVE+ILAVP +R R    P  Y+ K+D+G+VP YL  V+ E+  EN M+EEFVR+   +    E         +   E+  LVD LKAKWD VN +YQ+L H   F+  G++  K   E EL  +E D+  L KG V V
Sbjct:    5 ECIYNLIPRPEVQPVKPERYRSKFDPHVQPTGSTFGVRGKTKLEGANLGAPERLAKPSSARGFGRVLTKPDPKSFIRKGERSATAVVSAKRTREPSSKFTYAGQA---------------------------------KPAVVRKDEKPIMGLKSAKNFVTANAVESILAVPGHRARVVTEPPQYVSKQDYGQVPRYLSQVKDEIARENSMIEEFVRQNRNL---LEEDGRGRAEPMDERERLALVDSLKAKWDHVNGKYQKLCHNVVFDTLGKVRRKETFEKELTQLERDIQLLEKGHVVV 270          
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Match: D8LGE6_ECTSI (Enkurin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE6_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.050e-36
Identity = 102/287 (35.54%), Postives = 150/287 (52.26%), Query Frame = 1
Query:   70 ESIYNMLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKE--GKRSMEPRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGXXXXXXXXXXLRQKGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAVPTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGISTIAEARKNCTLL*LPSEEQAELVDKLKAKWDEVNSRYQQLVHQTFFE-HGRMAAKARLEGELDDIEADLSKLTKGPVAVVP 921
            E+IY+++P V +  +KPPMYK+  D    +  STF         FG  +  G   ++ +     G  +EA R    +  L K +   +G+G  G           + KG A         P   K  VPRR++ P  G+ S  NFVT+NAV+ ILAVP      P++YL+KED+G+VP YL  V++E+  EN M++ FVREQMG+        +  L  L   E+ EL+  LKAKWD VN +YQ + H    +  G++  K ++E +L  +E D+ KL K PV + P
Sbjct:    3 ETIYSLVPHVPDVPVKPPMYKSRHDPVCVLAGSTF-------GAFGTTQPIGAAVLKKQASGTFGPPVEALRNDPAK-FLKKGTKTQTGTGASGDKDSGGDAKSSK-KGPAPAF----TYPGERKAMVPRRDDCPVTGIVSKANFVTANAVDTILAVPRRVDLEPVNYLEKEDYGKVPKYLQQVKSEITRENAMIDMFVREQMGLEV---GDDDDHLEELRERERTELLHALKAKWDTVNKKYQLMAHMVNLDTFGKLRRKEQMETQLKGLEKDIEKLEKTPVLIRP 273          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0N0_ECTSI2.590e-11876.76Enkurin domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YSE5_9STRA8.390e-4436.97Enkurin domain-containing protein n=1 Tax=Tribonem... [more]
A0A225WDZ9_9STRA3.200e-3936.64Enkurin domain-containing protein n=1 Tax=Phytopht... [more]
A0A067BZX0_SAPPC4.100e-3836.03Enkurin domain-containing protein n=3 Tax=Saproleg... [more]
K3W8L4_GLOUD6.730e-3833.77Enkurin domain-containing protein n=1 Tax=Globispo... [more]
A0A8K1FHD5_PYTOL5.440e-3737.04Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2FLR5_9STRA7.130e-3735.19Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YFA4_AURAN8.030e-3747.44Enkurin domain-containing protein (Fragment) n=1 T... [more]
A0A662XIL3_9STRA8.450e-3735.10Enkurin domain-containing protein n=1 Tax=Nothophy... [more]
D8LGE6_ECTSI1.050e-3635.54Enkurin domain-containing protein n=1 Tax=Ectocarp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2273511..2277203 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score306.6
Seed ortholog evalue9e-81
Seed eggNOG ortholog2880.D7G0N0
Preferred nameENKUR
Hectar predicted targeting categoryother localisation
GOsGO:0001669,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005929,GO:0012505,GO:0030141,GO:0031410,GO:0031514,GO:0031982,GO:0036126,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0097223,GO:0097228,GO:0097708,GO:0097729,GO:0099503,GO:0120025,GO:0120038
EggNOG free text desc.Enkurin, TRPC channel interacting protein
EggNOG OGs28KS9@1,2QT8E@2759
Ec32 ortholog descriptionEnkurin
Ec32 orthologEc-07_001480.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size921
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14465.1prot_C-linearis_contig7.14465.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig7 2273595..2277002 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930304.8565142-UTR-C-linearis_contig7:2273510..22735941622930304.8565142-UTR-C-linearis_contig7:2273510..2273594Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 2273511..2273594 +
1690881002.8329444-UTR-C-linearis_contig7:2273510..22735941690881002.8329444-UTR-C-linearis_contig7:2273510..2273594Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 2273511..2273594 +
1622930304.996392-UTR-C-linearis_contig7:2277002..22772031622930304.996392-UTR-C-linearis_contig7:2277002..2277203Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 2277003..2277203 +
1690881002.8997195-UTR-C-linearis_contig7:2277002..22772031690881002.8997195-UTR-C-linearis_contig7:2277002..2277203Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 2277003..2277203 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930304.8794699-CDS-C-linearis_contig7:2273594..22736211622930304.8794699-CDS-C-linearis_contig7:2273594..2273621Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2273595..2273621 +
1690881002.8429024-CDS-C-linearis_contig7:2273594..22736211690881002.8429024-CDS-C-linearis_contig7:2273594..2273621Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2273595..2273621 +
1622930304.8968592-CDS-C-linearis_contig7:2274106..22741971622930304.8968592-CDS-C-linearis_contig7:2274106..2274197Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2274107..2274197 +
1690881002.8514616-CDS-C-linearis_contig7:2274106..22741971690881002.8514616-CDS-C-linearis_contig7:2274106..2274197Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2274107..2274197 +
1622930304.9141235-CDS-C-linearis_contig7:2274795..22750241622930304.9141235-CDS-C-linearis_contig7:2274795..2275024Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2274796..2275024 +
1690881002.863464-CDS-C-linearis_contig7:2274795..22750241690881002.863464-CDS-C-linearis_contig7:2274795..2275024Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2274796..2275024 +
1622930304.938442-CDS-C-linearis_contig7:2275892..22760581622930304.938442-CDS-C-linearis_contig7:2275892..2276058Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2275893..2276058 +
1690881002.8724282-CDS-C-linearis_contig7:2275892..22760581690881002.8724282-CDS-C-linearis_contig7:2275892..2276058Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2275893..2276058 +
1622930304.9583933-CDS-C-linearis_contig7:2276596..22767171622930304.9583933-CDS-C-linearis_contig7:2276596..2276717Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2276597..2276717 +
1690881002.8826723-CDS-C-linearis_contig7:2276596..22767171690881002.8826723-CDS-C-linearis_contig7:2276596..2276717Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2276597..2276717 +
1622930304.9749556-CDS-C-linearis_contig7:2277000..22770021622930304.9749556-CDS-C-linearis_contig7:2277000..2277002Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2277001..2277002 +
1690881002.8913767-CDS-C-linearis_contig7:2277000..22770021690881002.8913767-CDS-C-linearis_contig7:2277000..2277002Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 2277001..2277002 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig7.14465.1

>prot_C-linearis_contig7.14465.1 ID=prot_C-linearis_contig7.14465.1|Name=mRNA_C-linearis_contig7.14465.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=212bp
MLPRVKEETLKPPMYKATFDHSRKIQCSTFDQRKAKGSMFGIKEGKRSME
PRNFLRVGEGIEARRRAGKRPELPKISHFGSGSGGLGGGGGGSSSSSLRQ
KGGAGLERGLQILPTRMKPPVPRREEHPTMGLHSAKNFVTSNAVEAILAV
PTNRRRPPIDYLKKEDFGRVPDYLGLVQAEVRAENEMVEEFVREQMGIST
IAEARKNCTLL*
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mRNA from alignment at C-linearis_contig7:2273511..2277203+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig7.14465.1 ID=mRNA_C-linearis_contig7.14465.1|Name=mRNA_C-linearis_contig7.14465.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3693bp|location=Sequence derived from alignment at C-linearis_contig7:2273511..2277203+ (Chordaria linearis ClinC8C monoicous)
AGAGGGGGAGGAAGAAGAGCGCCGTTCGATGCAGAGCAGCGAGCTACTTA TACAGAATGGGGGGGGGCGGAAAGCATATACAACATGTTGCCCAGGGTGA AGGAGGAAACGGTAAGTAAGCATCGCCGCCAACGGCATTGATTTCGGCGA TTGTGGGGGATGGATGCTCTTGGAAGCCTTGGTAGCTCTGTCCCATGAAG TACCAGTATATCTAGTGAAGGAGCAGTCCTGTGCTCCGACTTACGTCCCA CCTGCGGAGGCTCGGGGAGGCTGCAGGCATTCCTCTGTTGCCCTAGACGG CGGTGTCCTGTTCAACCCATCCATGTCCTTAAAGGAGAGGAGAGCCGTTG GTCGGCTGTTCTTGTCTTCGAACAGTTTTCTTGAGAGGACAGAGAGATGA GCATGGAGGCTCGCTCGAAAACTGAAAAAGGCACACAACCGAACATCCTC CGACTTTGGGGAAACATGAACGAGTCAAGCAGAGATTGGCACTCTTTTTT GCACTTAATCATGACATTCTTATCTCCCCCGCCGCCTGCCTGCGTGTGCT ATGTACTTCTCTGGCGTCGGTTTGGCGGTGCGGCCGGCCACCGCAGCTTA AACCGCCGATGTATAAGGCCACTTTCGACCACAGCAGAAAGATCCAGTGC TCGACGTTCGACCAGCGAAAGGCCAAAGGCAGCATGTGTGAGTGGTGTAC AGTAGTGCTCTCGAACCTCGAACCAACAGCAACGAAATCTAGAAAAACAT CAACGGAAAAAATCGTCTTGGCAAAAAGTCGCGTGACATGGGGCAGAAAT ACAGCAGAACGCCCTCGAGACGCGACGTTCCCAACAAGGGTGAAGGAACT TCACACACTACTGGTGACCAACACACAAAACACATAGCTAAAAAGTCGCT CTGCTATTTTCGTTTTTTTCAAAACCACGCCCAGTTGGTGTTCGTGGCAT TTTGCAGACCAGACGTTTTGGGGGCGGGGCAGGGACGACTCGGAGAAAAA AAACGTGCATGCTGTGTAGCTCGCCAGAAAACCCAAGCAAACAACAAAGC AGGAGGACGAAGAGTCGGCGGCTGGGCCAACATTCGACACAGCAGTACAA ATACGCTACCGGTAGCGAGCGGCCACACTTCTGCTGCCGCCGAGCAGCTT CGGGATCGTCGTCCGCATGGTGATCGTTCCTCTCGCCCCTGTCCATTCAT GCACTCGCCCCCGCCCTTGCCTTCCCCTCGCCTACACGATCTCTCTCTCG TTTTTTGCCGCATGTCTCGGCTTGCTTGCAAGCAGTCGGGATAAAAGAAG GAAAGCGGTCCATGGAGCCGAGGAACTTCTTGCGAGTTGGGGAGGGCATC GAGGCAAGGCGGAGGGCTGGAAAGCGGCCGGAATTGCCAAAGATAAGTCA CTTCGGCAGTGGTTCAGGTGGACTTGGCGGCGGCGGCGGAGGCAGCAGCA GCAGCAGCTTGAGGCAGAAAGGGGGGGCGGGATTGGAGCGCGGCTTACAA ATACTGCCAACAAGGTATCTATCCTGATTGCTGAAATAATTAGCCGGTTG CAGATTGGGGGTCGGGGTGCCTTCGTTGGGGTTAGTGGTGGTGTGGTTGA GTGTGTGTCGTTTCCGGAGCAGTTGCCGCAAGCTCAGGAAGATATCTCTT TTTTCAATAAAACGGCAGTAGCACCCAGACACACGCCCTTGCCCGTTTCA TAAATTGTCCGACGTGGACATAGACCAATTCGAGATTCCACTTTGCCCTG ATGTCTATTGTGGGGAGCACACCTCGTAGCTGCTCGAGGAGGTAAGTCAA ACAATCTCCGACGCGGAGAAAAACCGATTCAAGACTTCGTCAATATCGGC TAAAAGACACCCAGCACCCAAACACGCTCCGCTATATTTGCCTGCCAACC CCGTGCCCACTCTTGTTGCATTATTTTCCCAATGAATCCGGAGAGATGTG CCGCCTAGCATAACTCCCCACTACCTGTATACTTCGAAGTATTTGCACAA CGCATGGGGGTCCGTCGGTCATTCTACCCCCATTGGCCCATTAGCCGCGG TGTGCTGTTCTGTCTCCTACACACAGCTCCCGTTGAAATATGGGCCAGTC GATGGAACCGCTCCTCCTATTGAATTGGGGCAGCCAGATGTATATCCGCG CGTGCTGCTACTGCTGTGTCCGTGCTCGTCAGAGGCAGGTCCAAAAGACG TTCCACAGCCTCTCTGCTTCTAACCTCTCACCCCACTACTTACGCAGTAT ACACGAAGTACAGTATATTGTTGGCTGCCTTTTGCTCCCCCTTGTCGGTG CTGATAACTGGGGAACTGGCGGTCGTGGACACAGCAGTGCGTCTGTTCAT CGTTTTTTTATGTTGTGCTCTCAACTCAAAAGGATGAAGCCTCCGGTCCC GCGGCGAGAAGAGCATCCCACGATGGGCCTGCACAGCGCCAAGAACTTTG TCACCTCGAACGCCGTGGAGGCTATCCTCGCGGTGCCGACGAACAGACGG CGACCGCCGATCGACTACCTCAAGAAGGAGGATTTTGGCAGAGTACCGGT GAGAGGAAGAAGAGCATCCGCGTGCTGCTACCGCGCACAAGACCGTCGTG ACGTTTCGGAATAATTAGTTAGGCGTATTGGGAGCAGACGGGACTGCTTT CGGCTCTCTTTGGGGGTATTGGAATGTATAAGTCGTACACGGGGCGTTTT CTCTTCCGAGTGCACCTCTCTGTCTGTCTCTGTCTGTCTCTCTCTCTCTT GTGACCATCGAATATTATTTTCGCTCTATCTGGTAGAAGGGGGGAGATCG TGTGTCTTGACTTTCCGGGGTCGTAGTTTCTGCCCGTCTCGCTCTGATGT GTATCTCACTTTTGGCTTACCGATTTCCCGTTAGGACTGCGGCCTGCGTG GTAAGCCACAATGAAAGAACGCAAACAACTTTCTATCTGACTACAACAGA ATACATGCACAACGCCGCCATCACCGCACCCCAAGGATCGAAGGAATTGC CAGATCAGCCCCCCGGTCTGTTTTAAACGACCTTCCGACTCTCGACTTTT CGACGTCCGGCGCTCATCGATTTGTTTTTGCGGCAGGACTATCTGGGGCT GGTGCAAGCAGAAGTTCGGGCCGAGAACGAGATGGTGGAGGAGTTTGTGA GAGAGCAAATGGGTATCAGCACGATTGCAGAGGCAAGAAAAAATTGCACG CTCCTTTGTACATGAGAAGCGTGACGACCAATGTGCTATCTCGGGAGCTG CACGTTGGGGATACTCTATTCAGCGGAAGAGGAAGAGGAAGAGGACGTGA GATACGAATTACACCGGAACACCGTGCACCAAGGACGGTTATTTCCGGTT ACCGCCAGAGGAAATGTTCTATCAGGGACGATTGGTAAAGAAAGGCGATG CGTTTTGTCACGACTCCCAACCCCATCCCATCCCATACGGCGTCAACCGT GCCTCCTTCCTTATGGTGATACTGCAGAAGGAAATCCCAGAATTGCCAAG CGAGGAGCAAGCGGAGCTGGTCGACAAGCTCAAGGCCAAGTGGGACGAGG TCAACTCCCGCTACCAGCAGCTGGTACACCAGACCTTCTTCGAGCACGGG CGGATGGCGGCAAAGGCGCGCTTGGAAGGGGAGCTAGATGATATAGAGGC CGACCTTTCGAAGCTGACCAAGGGCCCCGTTGCCGTGGTCCCA
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Coding sequence (CDS) from alignment at C-linearis_contig7:2273511..2277203+

>mRNA_C-linearis_contig7.14465.1 ID=mRNA_C-linearis_contig7.14465.1|Name=mRNA_C-linearis_contig7.14465.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at C-linearis_contig7:2273511..2277203+ (Chordaria linearis ClinC8C monoicous)
ATGTTGCCCAGGGTGAAGGAGGAAACGATGTTGCCCAGGGTGAAGGAGGA
AACGCTTAAACCGCCGATGTATAAGGCCACTTTCGACCACAGCAGAAAGA
TCCAGTGCTCGACGTTCGACCAGCGAAAGGCCAAAGGCAGCATGTCTTAA
ACCGCCGATGTATAAGGCCACTTTCGACCACAGCAGAAAGATCCAGTGCT
CGACGTTCGACCAGCGAAAGGCCAAAGGCAGCATGTTCGGGATAAAAGAA
GGAAAGCGGTCCATGGAGCCGAGGAACTTCTTGCGAGTTGGGGAGGGCAT
CGAGGCAAGGCGGAGGGCTGGAAAGCGGCCGGAATTGCCAAAGATAAGTC
ACTTCGGCAGTGGTTCAGGTGGACTTGGCGGCGGCGGCGGAGGCAGCAGC
AGCAGCAGCTTGAGGCAGAAAGGGGGGGCGGGATTGGAGCGCGGCTTACA
AATACTGCCAACAAGTCGGGATAAAAGAAGGAAAGCGGTCCATGGAGCCG
AGGAACTTCTTGCGAGTTGGGGAGGGCATCGAGGCAAGGCGGAGGGCTGG
AAAGCGGCCGGAATTGCCAAAGATAAGTCACTTCGGCAGTGGTTCAGGTG
GACTTGGCGGCGGCGGCGGAGGCAGCAGCAGCAGCAGCTTGAGGCAGAAA
GGGGGGGCGGGATTGGAGCGCGGCTTACAAATACTGCCAACAAGGATGAA
GCCTCCGGTCCCGCGGCGAGAAGAGCATCCCACGATGGGCCTGCACAGCG
CCAAGAACTTTGTCACCTCGAACGCCGTGGAGGCTATCCTCGCGGTGCCG
ACGAACAGACGGCGACCGCCGATCGACTACCTCAAGAAGGAGGATTTTGG
CAGAGTACCGGATGAAGCCTCCGGTCCCGCGGCGAGAAGAGCATCCCACG
ATGGGCCTGCACAGCGCCAAGAACTTTGTCACCTCGAACGCCGTGGAGGC
TATCCTCGCGGTGCCGACGAACAGACGGCGACCGCCGATCGACTACCTCA
AGAAGGAGGATTTTGGCAGAGTACCGGACTATCTGGGGCTGGTGCAAGCA
GAAGTTCGGGCCGAGAACGAGATGGTGGAGGAGTTTGTGAGAGAGCAAAT
GGGTATCAGCACGATTGCAGAGGCAAGAAAAAATTGCACGCTCCTTTGAC
TATCTGGGGCTGGTGCAAGCAGAAGTTCGGGCCGAGAACGAGATGGTGGA
GGAGTTTGTGAGAGAGCAAATGGGTATCAGCACGATTGCAGAGGCAAGAA
AAAATTGCACGCTCCTTTAAAA
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