prot_C-linearis_contig7.14462.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14462.1
Unique Nameprot_C-linearis_contig7.14462.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length209
Homology
BLAST of mRNA_C-linearis_contig7.14462.1 vs. uniprot
Match: D7G0M7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0M7_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 3.790e-126
Identity = 175/209 (83.73%), Postives = 188/209 (89.95%), Query Frame = 0
Query:    1 INKTASDEVFDGGYSPPPSDPRFSTVTRMELTKTVYTPGYAIRRPKEGFDRLTANRTNYSLGNH-TAELATATAELQMKHPRDRPLVDQPAMGGPTLSDGSYRLDAGARDSIRRGGGGGEGVFGVRFDIINGRGDEGARDKASMRSGPRRTLNNAEKGSLHPTDAWGDVPGGMYVDILTGKERERFEAPERGAGAPVRSDTVAGRTRPW 208
            +NK ASDEVFDG YSPPPSDPRFSTVTRMELTK+V+TPGYAIRRPKEGFDRL ANRTNYSLG H T EL TATAELQMKHPRD+P VDQPA+GG TL DGSYRLD  ARDS+RRGGGGGEGV GVRFD+INGR DEGAR K +MR+GPRRTLNNAEK  LHPTD WGDVPGGMYVDILTGK+R +F+ PERGAGAPVRSDTV+GRTRPW
Sbjct:    2 VNKNASDEVFDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPKEGFDRLNANRTNYSLGQHPTTELKTATAELQMKHPRDQPRVDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFDVINGREDEGARGKVAMRTGPRRTLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDVPERGAGAPVRSDTVSGRTRPW 210          
BLAST of mRNA_C-linearis_contig7.14462.1 vs. uniprot
Match: A0A7S4DHZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHZ4_HETAK)

HSP 1 Score: 110 bits (274), Expect = 7.320e-27
Identity = 67/156 (42.95%), Postives = 89/156 (57.05%), Query Frame = 0
Query:    3 KTASD-EVFDGGYSPPPSDPRFSTVTRMELTKTVYTPGYAIRRPKEGFDRLTANRTNYSLGNHTAELATATAELQMKHPRDRP-LVDQPAMGGPTLSDGSYRLDAGARDSIRRGGGGGEGVFGVRFDIINGRGDEGARDKASMRSGPRRTLNNAEK 156
            K  SD E   GGYS  P D  + TV + ELTK+ +T GY+  +P +GFDR TANRTNYSLG+H+ E  +A   LQ+ HP +R    +QP +GG    +G Y  D  +  +I+RGG G  GV  + FDI+ G      R     R GPR + N  +K
Sbjct:    6 KNKSDKESIQGGYSYIP-DQHYKTVAQAELTKSTHTHGYSKAKPGDGFDRQTANRTNYSLGSHSIEYKSANHALQLSHPEERSHRPEQPQLGGWNRGNGHYHQDIESMRTIQRGGAGAGGVLQLNFDIVTGADKPHVRADNLRRFGPRVSENVRQK 160          
BLAST of mRNA_C-linearis_contig7.14462.1 vs. uniprot
Match: A0A7S2S3K8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3K8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.910e-26
Identity = 76/217 (35.02%), Postives = 114/217 (52.53%), Query Frame = 0
Query:    1 INKTASD-EVFDGGYSPPPSDPR--FSTVTRMELTKTVYTPGYAIRRPKEGFDRLTANRTNYSLGNHTAELAT-----ATAELQMKHPRDRPLVDQPAMGGPTLSDGSYRLDAGARDSIRRGGGGGEGVFGVRFDIINGRGDEGARDKASMRSGPRRTLNNAEKGSLHPTDAWGDVPGGMYVDILTGKERERFEAPER-GAGAPVRSDTVAGRTRPW 208
            I+K ASD +   G    P  DPR  F T    +             R +  FDRL+A++TNY +   T+ L T      T+ +   HP+ RP  +Q A+GG   S G Y  +  A+++++RGGGGGEG  GVRF+I+   G   AR+ A +++GPR ++N  E      ++ +GD    M  +I+TGK+   F+AP+  G    +R +    RTRPW
Sbjct:   65 IHKNASDKDSIQGAEGGPYHDPRKVFKTTFASDYHSGASALSEKYVRERPAFDRLSASKTNYEI---TSPLETIPPFKTTSHVLHAHPKTRPQPEQAAIGGWRTSTGEYCTNELAKETVKRGGGGGEGSLGVRFNIVTNEGAPRARETALLQTGPRVSMNKKEPWR-QGSNRFGDSD--MQTNIITGKQHAHFQAPKPLGPADLLRPNEAIARTRPW 275          
BLAST of mRNA_C-linearis_contig7.14462.1 vs. uniprot
Match: A0A7S2D1K6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D1K6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 8.020e-21
Identity = 77/205 (37.56%), Postives = 102/205 (49.76%), Query Frame = 0
Query:    8 EVFDGG---YSPPPSDPRFSTVTRMELTKTVYTPGYAIRRPKEGFDRLTANRTNYSLGNHTAELATATAELQMKHPRDRPLVDQPAMGGPTLSDGSYRLDAGARDSIRRGGGGGEGVFGVRFDIINGRGDEGARDKASMRSGPRRTLNNAEKGSLHPTDAWGDVPGGMYVDILTGKERERFEAP-ERGAGAPVRSDTVAGRTRPW 208
            E F GG   Y  P    R +  +      T+++  Y    PK  + RLTA RTNY+LG +  +LA+ T+      P     V   A  G   +   Y  D  AR+SI RGGGGGEG  G RFDIING+ D   R++ SMR+G R ++N  E  S    D +GD      V+IL+G+ R R   P ++ A    R D     TRPW
Sbjct:   80 ESFQGGPPKYKDPNVVYRTTKASDFNHESTLHSNEYMKSEPK--YTRLTAGRTNYTLGAYEGKLAS-TSHTHHAPPCPIERVKGQATIGGWQTGNKYHTDIHARESIMRGGGGGEGSLGTRFDIINGKDDPSFRNRVSMRTGARVSVNKREPWS-QGADRYGDHH--EPVNILSGQPRTRHNPPPQQNALQLRRPDQPLLATRPW 278          
BLAST of mRNA_C-linearis_contig7.14462.1 vs. uniprot
Match: A0A835YXM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.590e-20
Identity = 66/171 (38.60%), Postives = 82/171 (47.95%), Query Frame = 0
Query:   39 GYAIRRPKEGFDRLTANRTNYSLGNHTAELATATAELQMKHPRDRPLVDQPAMGGPTLSDGSYRLDAGARDSIRRGGGGGEGVFGVRFDIINGRGDEGARDKASMRSGPRRTLNNAEKGSLHPTDAWGDVPGGMYVDILTGKE-RERFEAPERGAGAPVRSDTVAGRTRPW 208
            G+  +RP  G+DRLTA+RTNYSLG   A  +TA AE Q   PR R  V QP +G           DA                 G  + II G   + AR++     GPR TLN  E+  LHPTD+WG    G +VDI+TGK        P       +R D +  RTRPW
Sbjct:   99 GFKRQRPLPGYDRLTASRTNYSLGTQPATSSTAAAE-QFADPRTRTPVQQPCIGP---------ADA---------------CLGSSYHIITGESWD-AREQRLRCMGPRHTLNQEERCKLHPTDSWGGDLYGTHVDIVTGKRVANPIRPPAPTVETLLRPDALGLRTRPW 243          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G0M7_ECTSI3.790e-12683.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4DHZ4_HETAK7.320e-2742.95Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2S3K8_9STRA5.910e-2635.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D1K6_9STRA8.020e-2137.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YXM3_9STRA1.590e-2038.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2246715..2247960 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14462.1mRNA_C-linearis_contig7.14462.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2246715..2247960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14462.1 ID=prot_C-linearis_contig7.14462.1|Name=mRNA_C-linearis_contig7.14462.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=209bp
INKTASDEVFDGGYSPPPSDPRFSTVTRMELTKTVYTPGYAIRRPKEGFD
RLTANRTNYSLGNHTAELATATAELQMKHPRDRPLVDQPAMGGPTLSDGS
YRLDAGARDSIRRGGGGGEGVFGVRFDIINGRGDEGARDKASMRSGPRRT
LNNAEKGSLHPTDAWGDVPGGMYVDILTGKERERFEAPERGAGAPVRSDT
VAGRTRPW*
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