mRNA_C-linearis_contig110.1433.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig110.1433.1
Unique NamemRNA_C-linearis_contig110.1433.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: D7G0V2_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0V2_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 1.360e-140
Identity = 207/229 (90.39%), Postives = 218/229 (95.20%), Query Frame = 3 
Query:  291 KKGPSNSTAFDATEHVSKTPNLTPVVRHEVMVDPPTSRELTYECISETHAYKGWRSILRRKIRGPQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELGHIM 977
            +K P+N+TAFD TE  SKTPNLTPVVR EVMVDPPTSREL YECISE+ AYKGWRSILRR+IRGPQGK+RSYDVITQEHPSVLVFTWDTQTNTTTILKE+YPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTW+ LMKDERTVA AGKYSTQ+FYSYLVVDPVVKG PR LDDGEFIEYIRGVSLEEVRAMI++GDMSVTSGFAALMAIEKLRELGHIM
Sbjct:   39 RKSPTNATAFDVTEPASKTPNLTPVVRQEVMVDPPTSRELKYECISESPAYKGWRSILRRRIRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWYALMKDERTVAGAGKYSTQVFYSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVRAMIHSGDMSVTSGFAALMAIEKLRELGHIM 267
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BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: D7G6B3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B3_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 4.160e-51
Identity = 93/185 (50.27%), Postives = 121/185 (65.41%), Query Frame = 3 
Query:  414 YECISETHAYKGWRSILRRKIRGPQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELG 968
            ++ ++   AY GWR I+++ +R    K   +DV+ QE PSV VF W TQTNT T++KE  PG   + +GVV G YE +KH S LQAA  ELEEEAHL  GTWHTL +D+ T   A KYS+  FY +LVVDP V   P+ +DD EFIE  RGVS++E   M+  G++S+ S F  LM   KLR+LG
Sbjct:   48 FKVLNRDLAYSGWRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTINADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLG 232
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BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: A0A0G4H3V0_VITBC (Nudix hydrolase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3V0_VITBC)

HSP 1 Score: 158 bits (399), Expect = 2.460e-40
Identity = 86/187 (45.99%), Postives = 111/187 (59.36%), Query Frame = 3 
Query:  414 YECISETHAYKGWRSILRRKIRGPQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELGHI 974
            ++ I E   Y+GW++++ R I  P GK   YD+   + P+V V  WDTQ  TT   +E+YPG N+   G V G YE  KH S L AA  ELEEEAHL  G W  L+ +ER V    KYS QIFY++L +DPV   +PR LDD E I   R V  + V      G  +VT+  AAL+AIEKLRE+G +
Sbjct:   37 FKVIGEQMVYQGWKNVMHRTIELPNGKTTRYDINHSDCPAVFVVPWDTQKKTTIFAEEYYPGPNQWKKGFVAGLYERKKHESPLHAAKLELEEEAHLVGGKWINLI-NERGVMDYEKYSDQIFYAFLCLDPVHTDDPRPLDDSEVIYLHRDVPAKAVLEGALHGHFTVTTSLAALLAIEKLREIGEL 222
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BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: A0A7S1BIB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIB0_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.760e-37
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 3 
Query:  414 YECISETHAYKGWRSILRRKIRGPQGKVRSYDVITQEHP-SVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEA-DKHTSA--LQAAACELEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVDP----VVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELGHI 974
            YE IS+   Y  WRSI++RK++ P G V  +DV+ Q+   +V+VF WDT+T T T++KE+ PG  R++ GV  G  E+ DKH     + A   ELEEE HL  G W++L++D+ TV    KYS   F +YLV+D         + RALDD E IE I GVS+ ++  MI  G+M++  G+  L+A+EKLRELG I
Sbjct:  112 YEHISDILGYSRWRSIIQRKVKMPNGNVVDFDVVDQKGKGAVVVFAWDTRTKTATLIKEYNPGCMRIITGVAAGIIESGDKHDGGDPMVAGRFELEEECHLRNGRWYSLLEDDTTVPH-DKYSVTEFSAYLVLDADTIDSASEDVRALDDEEDIEIIHGVSVPKILEMIRKGEMNLVGGWTCLLALEKLRELGEI 305
[Close]
BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: A0A7S1ZSI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSI2_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.370e-36
Identity = 82/197 (41.62%), Postives = 115/197 (58.38%), Query Frame = 3 
Query:  414 YECISETHAYKGWRSILRRKIRGPQGKVRSYDVITQEHP-SVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEAD---KHTSALQAAACELEEEAHLHEGTWHTLMKDER------TVAAAGKYSTQIFYSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELGHI 974
            YE + E   ++ WRSIL R +R P G V  YDV+ Q+   +V++F W++QT T T+++E+ PG +R++YGV  G  E D    H    QAA  ELEEE HL  GTWH L           T     KY+      YLV+D      P+  DD E IE +R V+++EV  +I +G+M++  G+A L+AIEKLR+LG I
Sbjct:   98 YELLKEEVVFQRWRSILSRVVRMPNGNVVDYDVVDQKGVGAVVIFVWNSQTKTATLVREYNPGCHRILYGVAAGLIEDDAKHSHGDPKQAAIMELEEECHLSGGTWHCLTTPSSSSSSLPTSVPMDKYAVTNITPYLVIDASHVTNPKPCDDEEDIEIVRNVTIDEVLRLIRSGEMNLVGGWACLLAIEKLRDLGEI 294
[Close]
BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: A0A6U2S3A3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3A3_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.250e-35
Identity = 80/204 (39.22%), Postives = 118/204 (57.84%), Query Frame = 3 
Query:  369 RHEVMVDPPTSRELTYECISETHAYKGWRSILRRKIRGPQGKVRSYDVITQEHP-SVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAAC-ELEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELGHI 974
            +H   ++ P  ++  +  IS+   Y  WR I+RR ++ P G    +D++ Q+   +V +F W ++T T T+++E+ PG ++ ++GV  G  E DKH    + AA  ELEEE HL  G W+ L  D  TV    KY      +YLV+DP     PR LD  E IE I GVS+ E+  MI +G M++  G+A ++AIEKLRELG I
Sbjct:   24 QHPSQIEVPQPQQQQHRIISDEVVYSRWRKIIRRVVQFPAGNTVDFDIVDQKGTGAVTIFAWCSKTKTATLVREYNPGCHKSLHGVAAGLIEEDKHQCDPEIAARHELEEECHLQGGRWYRLTADGATVPM-DKYVVTEIAAYLVIDPETVSNPRPLDAEEDIEIISGVSVPEIFDMIRSGGMNLVGGWACMLAIEKLRELGEI 226
[Close]
BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: A0A482S980_9ARCH (NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S980_9ARCH)

HSP 1 Score: 136 bits (342), Expect = 2.190e-33
Identity = 72/164 (43.90%), Postives = 106/164 (64.63%), Query Frame = 3 
Query:  483 PQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVD--PVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELG 968
            P G+   YD+ITQ+H SV+VF WDT + TTT++KE++PG N++M G V G  E +KHTS LQAA  ELEEEAHL    W++L+ +E  +    KYS   F  YL +D  PV   +P  LDD E+I   R V+  E+  ++ +G ++V S +  ++ ++KL++LG
Sbjct:    3 PHGQKVDYDIITQKHLSVVVFVWDTASATTTLVKEYHPGPNKVMLGAVAGMCENEKHTSILQAAQHELEEEAHLRTDHWYSLL-NEGAIMPFDKYSNNRFIPYLALDCEPVKSAKP--LDDEEYITIHRNVTYNEMMELMASGQINVVSTYTIMLGLKKLKDLG 163
[Close]
BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: A0A7S1XDJ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDJ4_9RHOD)

HSP 1 Score: 131 bits (329), Expect = 1.200e-30
Identity = 71/183 (38.80%), Postives = 112/183 (61.20%), Query Frame = 3 
Query:  426 SETHAYKGWRSILRRKIRGPQGKVRSYDVITQEH--PSVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHTLMKDERTVAAA---GKYSTQIFYSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLR 959
            S+T  Y+G+RS+ +R++R P G+  ++D++ + H   SV VF +  ++ + T++KE+ PG N ++YGV+ G  E  KHTS + AA  EL EEA+L  G    L +   + +A     KYST  F+ +L +D  +   P   D  EFIE +RGVSL++VR +++ G M+V    A L+A+E LR
Sbjct:   65 SDTEVYRGYRSVFQRRVRYPSGESFTFDIVGRPHGDSSVFVFPFCRRSRSATLIKEYNPGGNGVLYGVIAGFVEMGKHTSIVDAARRELAEEANLIGGQLIPLQRQTDSSSAGYLKDKYSTDRFHMFLALDSELDPSPPQQDPEEFIEIVRGVSLDQVRTLVFNGQMNVPCSLACLLALEHLR 247
[Close]
BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: A0A2P6NY07_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NY07_9EUKA)

HSP 1 Score: 118 bits (296), Expect = 8.260e-27
Identity = 69/188 (36.70%), Postives = 107/188 (56.91%), Query Frame = 3 
Query:  399 SRELTYECISETHAYKGWRSILRRKIRGPQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRE 962
            S E  ++ + +T +YK + ++ +R+     G+  S+DV+      V VFT+DT+  TTTIL E+  G N L Y +  G YE+ KH S + AA  EL EEA L +G W +L+ +        K+ST +FY +LV+DPV    P   D  E I+  + V+++E+  +I +GDM + S     MAIE L++
Sbjct:    9 SSEGKFKILEDTVSYKRYLTVRKRETLFDDGRQISWDVVGNTTIFVTVFTFDTKKKTTTILAEYAQGTNDLRYTLAAGAYESKKHDSVIAAARAELSEEAFLKDGEWISLLPEG---IGELKWSTNVFYPFLVLDPVDDPSPPPRDLEETIQIYKDVTMDELHRIILSGDMMLPSVQTCYMAIEHLKQ 193
[Close]
BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Match: A0A7S4PK06_GUITH (Hypothetical protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S4PK06_GUITH)

HSP 1 Score: 114 bits (284), Expect = 1.210e-23
Identity = 67/166 (40.36%), Postives = 93/166 (56.02%), Query Frame = 3 
Query:  486 QGKVRSYDVITQ---EHPSVLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELGHI 974
            +GKV  + V+        SV+VF +D++T T  +++E+ PG + +  GV GG +E  KH   LQAA  EL EEA L  GTW  L  +        KYS    + YLV+D +    P+  DD E IE  +GV+LEE R  +  GDM   +    L+AI+KLR+LGHI
Sbjct:  199 EGKVVRWHVVGSPLGNFSSVVVFPFDSRTKTCWLIREYCPGTHSIQSGVPGGLFEEKKHKDLLQAARDELNEEAGLMGGTWIALAPEG---IPQDKYSRNRLHPYLVIDCMRDPNPKPKDDDEIIEVEQGVALEEARRRVLEGDMPAPAAMVTLLAIDKLRQLGHI 361
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7G0V2_ECTSI1.360e-14090.39Nudix hydrolase domain-containing protein n=2 Tax=... [more]
D7G6B3_ECTSI4.160e-5150.27Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A0G4H3V0_VITBC2.460e-4045.99Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S1BIB0_9STRA2.760e-3744.62Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S1ZSI2_9STRA3.370e-3641.62Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A6U2S3A3_9STRA1.250e-3539.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A482S980_9ARCH2.190e-3343.90NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 Rep... [more]
A0A7S1XDJ4_9RHOD1.200e-3038.80Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2P6NY07_9EUKA8.260e-2736.70Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S4PK06_GUITH1.210e-2340.36Hypothetical protein n=2 Tax=Geminigeraceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig110contigC-linearis_contig110:54575..62266 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score426.4
Seed ortholog evalue9.2e-117
Seed eggNOG ortholog2880.D7G0V2
Hectar predicted targeting categoryother localisation
EggNOG OGs2CFIT@1,2S4K6@2759
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-23_002190.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2308
Cds size747
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig110.1433.1prot_C-linearis_contig110.1433.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig110 55903..62033 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927473.4863458-UTR-C-linearis_contig110:54574..559021622927473.4863458-UTR-C-linearis_contig110:54574..55902Chordaria linearis ClinC8C monoicousUTRC-linearis_contig110 54575..55902 -
1690879721.80246-UTR-C-linearis_contig110:54574..559021690879721.80246-UTR-C-linearis_contig110:54574..55902Chordaria linearis ClinC8C monoicousUTRC-linearis_contig110 54575..55902 -
1622927473.5569115-UTR-C-linearis_contig110:62033..622661622927473.5569115-UTR-C-linearis_contig110:62033..62266Chordaria linearis ClinC8C monoicousUTRC-linearis_contig110 62034..62266 -
1690879721.872176-UTR-C-linearis_contig110:62033..622661690879721.872176-UTR-C-linearis_contig110:62033..62266Chordaria linearis ClinC8C monoicousUTRC-linearis_contig110 62034..62266 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927473.495543-CDS-C-linearis_contig110:55902..560011622927473.495543-CDS-C-linearis_contig110:55902..56001Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 55903..56001 -
1690879721.8124578-CDS-C-linearis_contig110:55902..560011690879721.8124578-CDS-C-linearis_contig110:55902..56001Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 55903..56001 -
1622927473.506592-CDS-C-linearis_contig110:56340..565531622927473.506592-CDS-C-linearis_contig110:56340..56553Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 56341..56553 -
1690879721.8208146-CDS-C-linearis_contig110:56340..565531690879721.8208146-CDS-C-linearis_contig110:56340..56553Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 56341..56553 -
1622927473.5179174-CDS-C-linearis_contig110:56893..570011622927473.5179174-CDS-C-linearis_contig110:56893..57001Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 56894..57001 -
1690879721.8331351-CDS-C-linearis_contig110:56893..570011690879721.8331351-CDS-C-linearis_contig110:56893..57001Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 56894..57001 -
1622927473.529567-CDS-C-linearis_contig110:57528..576511622927473.529567-CDS-C-linearis_contig110:57528..57651Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 57529..57651 -
1690879721.8448915-CDS-C-linearis_contig110:57528..576511690879721.8448915-CDS-C-linearis_contig110:57528..57651Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 57529..57651 -
1622927473.537809-CDS-C-linearis_contig110:57908..580491622927473.537809-CDS-C-linearis_contig110:57908..58049Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 57909..58049 -
1690879721.8561783-CDS-C-linearis_contig110:57908..580491690879721.8561783-CDS-C-linearis_contig110:57908..58049Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 57909..58049 -
1622927473.5466244-CDS-C-linearis_contig110:61970..620331622927473.5466244-CDS-C-linearis_contig110:61970..62033Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 61971..62033 -
1690879721.8641012-CDS-C-linearis_contig110:61970..620331690879721.8641012-CDS-C-linearis_contig110:61970..62033Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 61971..62033 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig110.1433.1

>prot_C-linearis_contig110.1433.1 ID=prot_C-linearis_contig110.1433.1|Name=mRNA_C-linearis_contig110.1433.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=249bp
MRSSEKSKAGGALSGLLWWKKGPSNSTAFDATEHVSKTPNLTPVVRHEVM
VDPPTSRELTYECISETHAYKGWRSILRRKIRGPQGKVRSYDVITQEHPS
VLVFTWDTQTNTTTILKEHYPGMNRLMYGVVGGNYEADKHTSALQAAACE
LEEEAHLHEGTWHTLMKDERTVAAAGKYSTQIFYSYLVVDPVVKGEPRAL
DDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALMAIEKLRELGHIM*
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mRNA from alignment at C-linearis_contig110:54575..62266-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig110.1433.1 ID=mRNA_C-linearis_contig110.1433.1|Name=mRNA_C-linearis_contig110.1433.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7692bp|location=Sequence derived from alignment at C-linearis_contig110:54575..62266- (Chordaria linearis ClinC8C monoicous)
CTTAGAGATCGAGCCCTGCCTTCGTGCTTCCTCTGTGCGTCTTCCCGAGA
ATCAAACCCAGTAGTGGCTCAACCCCTGGCGTGCTAGGAAGGCGAGCTAG
AGCTAGAGAGCGAGAGCGAGAGCATCAAACACGACAGGGTGGGGGGGACC
CTCACAACCCGAGCGCGTGTGCAGCCTGGGGCGAGCCGTGTGTGCTGGTG
AGAGGAGACTAAGGGGTTGGGGAGGCATCGGAGATGCGCAGCAGCGAAAA
GAGCAAGGCGGGTGGCGCCCTTTCGGGGCTCTTGTGGTGGAAAAAGGTGC
GAAATAATTCGAGTGTTGAGTGTGAAAAGTGTGTGCGTGGCCTCAATCGC
TCTTTCTCTCTCTCTTTGCTCTCTCTCTGTTGGTGGCCGTTACTTTCTCG
AATCCTCTCTTATCTTGATCGCATATCGCGTAGTGTAGGTCCAGGACATG
TGCATACCGCTGCCCGTAAAAACCGACCGCGGTGCGCACAACCGGACCTG
GGGCAACGAAAGAAGCCCATGTGTGGGGGGGGCTGTTACCGAAGCAGATG
GAAATATATATATACAGCATGCTCCTATGTACATGTATGCTCCGCGTTTC
CTTTTTTTTTTGACCCGGCGCGAACGCAGATGCTTTGACGGCGGTACCGG
TAGAGAAGGTTGCACTCGCTGTTGGACGTGTTTGTCAGCATGCCCGCCCT
TATCGGGCCAGGAGCGAATCACGGCAGCAGCAACAACAAACGAGTATCTG
CAGCTGGCGTCAAGCTTGTGTTGTTGGTGGAACCAATGCAACAGCATTGG
CCCGTGGGAAAGCTTCCGAGTTTCTTCACAGTATTGTACCGGGAAGGTGT
CGCAGTCTCCTTGTCTTACACCCCCCCAAGGCAACTTTATCAGCTTATTT
GTTGTATGAATGTACAGGGTTTTGATTCTTCACGGGCTTTCTGCTGCATA
GAATTGTTGCTGCTGCCTGATAGAGGCCCCTCTCTGTGGAGCGGCCGCCC
TCCCCAACTATTACATCGAAGTACGAAGTATAGTGCTTCACCCTCAGTTT
TGGTGCAAAACAGCGGCGACTTCGCTGTGCTGGGAACAACAGCACTCAGG
CGGCCGGCCCGCCCGTCTTTTGTGCACTTACCGGCACCATGGTTGCGTTC
ACAAGTGCACCGACGGCCCGTAGACCTCGCGATCTTCCTGCTTAAAATGT
ATTTTGGTTCTCCTGTAAGTGGACCTCACTTGGGGAGAGCTTTGCCCACG
GCGACCGACGTGTGTGCCCCAGCAGGGTGCCGAAGTTTGCAGAACTCCTC
TGGTGGTTTGAGCCGCGACATACCGCTCCTTTGTCGGGTGCACGGGGCGG
ATCCCGCTCGGAGCAGGCTGCAAGTGAACCCTTCCCCCCCAGTTTCCCCC
AAAGATTCTTTGTGAGGAAATCAGTGTTCGGTGTTTTCGGTCGTTCGTTC
CGAAAGGGGTGCGCTGTCGGGGTCAACCAATGCGACGGATCTTAAGGCGT
CGGCAAGGGGGGGGGTTCGCAGACGTAGTGGTTCTTGAGGCTCAGTGAAA
CACACGAACGATCGATTTTTTGTGTGTCTGTTTTCTTTGGGTATGTGAAA
ATGACCATAGGGGCCCTCCAGAAAGCTCCTAAAACACACTTTTCCAGTTC
GACCCTGCTGTATACTTGTATGTATGTATGTATGTTGTATGTTTTCGTCC
CATTTATTTTGGCGACAGTCCCTTTCCGATCAAGGCGAGACGTGTACTAC
ACGTTGCGGTGTATCTAGAGTACTACACTTGTTCAGTGTATTTTTCTGTA
CAAATAGTCTAGAACAAACCGGGGTCACACAGGAGGGGGTAAACACTGGG
GCTTTTTTCTTCTTTTTCTGTTTCTTTTTTGCCCCACCTTCCTCCTGCGG
TGCTTGCCTTGGATTTTATCGCGAGAAGGGTGCAGCCATCCCTTTCCCTC
GTCAACGTGCTAAGTCGAAGTTTGGTACTCACGAGCTTTTTCAGCTATTT
TATCGCTTTCACCTGCAAAGTCGCAAAAGACACACCTTTTGCTTGGAATC
GAACTCTAGACTTTGCTGCTAGTGGGCTCGAGGTTAAACCACTAGTCCAC
CGGGGCGACCAGCTGTATCTACCCTCGAGTATTTCATATGCAACAGTTCA
TATGCAACAGTTTGCATTTCTCTACAGAGAAGAAGTGTGTCCAGAGGTTG
AAGGTGCGGGAACGCGGAGCTTTTGCTTAAGGCGTCGGCAAGGGGGGGTG
TTCGCAGACGTAGTGGTTCTTGGGGCTCTGGGAAACACACAACCGATTGA
TTTTTTGTCTGTCTATTTTCTTTGGGTATGTGGAAATGACCACACGGGCC
CTCCAGAAAGCTCCTAAAACACACTTTTCCGTTCGACCCTTAGCGTGCTG
CTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCGTCCCATTTATT
TTGGCGACGGTCCCTTTCCAATCAAGGCGAGACGTGTACTACAGGTTGCG
GTGTATTTAGAGTACTACACTTGTTCAGTGTATTTTTCTGTACAACTAGA
ACCAACCGGGGTCACACAGGAGGGGGTAAACACTGGGGCTATTTTCTTGT
TTTTCTGTTTCTTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGGA
TTTTATCGCGAGAAGGGTGCAGTCATCCCTTTCCCTCGTCAACGTGCTAA
GTCGAAGTTTGGTACTCACGAGCTTTTTCAGTTATGTTACGCTTTCACCC
GCAAAGTCGCAAAATAATCACCTTTGCTTGGAATTGAACTCCAGACTTTG
CTGCTAGTGGGCTCGAGGTTGAACCACTAGTCCACCGGGGCGACCGGTAT
ATACCGGTAAACAGTTTTCATTTCTCTGCGGAAAGGAAGAGTGCAGGTTC
TTTGTAGGTGCGCGGGAACGCGGAGCTTTTGCTTAAAAACCGTGCAAAAA
TCGCCCTTTTGAAAAGACTGTCAAACGGGCATCTGAGCGAGCGCTCAGTG
TTCACGGAGTCATCGAGCGAGGCTCTCACGAGCACGAACAGGCGCAAGCC
GCTAGCAGGGCCTACTGATATGGTGTGTAGGAGCCGTCGCATGTCGTCGA
CAGCAGCCGCAGATAGCTAGAACCACGCTTGAGAGATTTTCGTGAGCACG
AACGATTTTTTCAACCGCTCTTTTTTGGTCCAAAGCGGGTGAAAAAATTG
ATCAACGCCCCGGAGCCTCACACCGTGGTTTTTGCCCCAATCAAAAAACG
GACTTGACGCGAATGTAGCCCGGTTGTGACAGGTGCATATGAAATTCTCC
AGGACATTGTCAGCCGAAAAACGCACACTTAATTTTTTTTCGCGCAAAGG
GTGGTTAAAAAATGACGCCAAATACACCGCGTTTTTCACAAAAAAGAACT
GGAAATCTCGTAACACCTCTGGGAAATCTCGGAATACCTCTGACAAGGCT
GCAAAAGCGTCCGTTGTTTGGAAATCCTACCCTAATTTCAAGTGAGGCTC
CGTGAAGTTCAGCCGGGGGGTATGATATTTGCTCCGAAAAGGCCACACGG
CTTTTAGTATACCCCTCACCGTCCCCTTAAAACAGTAGCTAAGTAGTAGC
CTTGGCCCGAAACGGGCAGGATCTGTCCCTCGAAATCTGAAGGCTTTTTC
ACAGACGCCAGCAGTGCAAGTGATTCTCGATGGTGGCACGAAAGGTGCTT
AGTGGACGTCAACAGTAAGGAAACAGCCACATGCTTGGGGACAGGGAACA
GGTTTTTGTGGGGGGTGCATGCCAAACGCTGTCTCCGACCCAAATTCCAA
ATTCAAGCAGGGAATAAGTGTAAGTCTCCTGATCTTTGGTTCAAAATGTT
TTGGTCCTTGTTGTAACTGTCAAGAAAGATCATGCTCAAATCAAACTTGG
CCGCCGGATGAGGCAGGTTCCCCATGAATCCACCCAAACCTGTTACCACG
ACCACAGTCCGAATCCTGCGTCAGCCCCGGTAGAATACATACGTGGAATG
TCGATGCGCGGCTTTGTACTATTCAAAGCAACACTGCGAACTACGGTACA
TGTTATAGGTACGCCAGAAGACCGCAAATGGTTCTCAACAATGGCAACAC
TCCCTGAGCATAGAATCTGGTGCACAAGTAAAGCATGGTAGGTACGCTCG
CCCGATTAATTTCCGATTGGTTGGCTGATGAAACCGTCAACACGGCTGAA
TGATGCTTTTGGTACAGGGACCCAGCAACTCTACCGCCTTCGACGCCACC
GAGCACGTGTCGAAGACCCCGAACCTCACTCCGGTGGTGCGGCACGAGGT
CATGGTAGACCCACCGACATCGCGCGAGCTGACCTACGAGTGCATCAGCG
AAACGCATGTTAGTACACACGCTTTTTTTCCCTCTTTTTTTCTTTTGGGG
GTGAAAGGTCTGTGTAGGTAGGTGTACCTTTCACCTCAATGTAGGCGCCT
GCGACCCTTCGTGTTTACTCATGCTCCGTATCTTCGTGTGGAAAAGTAGG
CCACGCTGAAGACACGCTTATCAAAACGGTGGTCACCCATCGCCCGAACC
AGCCGAGCGACTGAACCGAGTCCTTGTTGCCATCTCTCCTCTCACGCGCG
CCCTTTTGTTCTCAGGCGTACAAAGGGTGGCGGAGTATCCTCCGACGAAA
AATCCGGGGGCCGCAGGGCAAGGTCCGATCGTACGACGTCATCACCCAGG
AGCACCCGTCTGTTCTCGTATTTACATGGGATACCCAGGTGAGCTACGTA
GATTCTCATTGGACACCAGGAGGATCCAAACAAGCGTATCGTGGTAGTAT
TTATGTAGTACCGGGGCGCTTGCGATCTCGCACGTCGCTCTTACAGTGCA
CGCTAATCTGCGCAGCAACCAGAGCTGGCGGTTGGCGTGCATCTCCATCC
CGTACCCCCTGTTGGGCGGAGAAAACGGAACCCAATATAGTAGTAGGCGT
GAGGTGCTGCGAAATTGACCACGTCGGTTGGCCGTGTGTGTTGCTGATAT
TCCGCCGCCGTTTTCGTTTCGTTTTCTCTCTTTTGTTTTTTTATTAAACA
AAATCAGGAAATCAAAGACAGAACCTCCTCCTCGCATTAGAGACAGGAGG
GGCTCTGTGGGCTTTGTATCGGTAGTCCTGACAACCTTTATATTACACGG
AGTATTGTACTTCTTGCTGTATGGGCCCCCGGCCGAGCAGGAAAAACACC
AAAAGTTTGAAACATTTTTTACATTTTCATCACCAACCCTGTTTTTTTTT
TTTTGCGTTTGGCAGACCAACACGACGACGATTCTGAAAGAGCACTACCC
GGGGATGAACCGCCTCATGTACGGAGTGGTCGGCGGGAACTACGAGGCGG
ATAAGCACACGTCGGCGTTGCAGGTGCGCTTTACTCCCCCTCCCTCGGGG
CACTTGTTGGCCCCTCTGTTGTGTCAGCTCGTCTGATAGGTACCTGCCTC
ACTCTGTCCTGTCTCTGGTTGAACACGAAGGCAAAATATAGAGATTGTTG
ATAATTTTCTTGCCCCACGGGCGGTAGGATGACGTGTATGTTGGCTCTTG
TTCCGGGTAATGTTTATTGCCTTGGTACCTTGAGGCGTTTCGCACACACC
TACTCTGGCCGCTAGGTATGCTTACCACAGCTCACTGCGTTTCATCACAC
ACCATACCACATATTTTGCAAAGCTTGCACCACATCTCTGTTTGTTGGTC
GACGGACGCACAGGCCGCCGCGTGCGAGCTGGAGGAGGAGGCACATCTCC
ACGAGGGCACCTGGCACACCCTCATGAAGGACGAGAGAACGGTAGCGGCG
GCCGGGAAGTACTCGACGCAAATATTCTACTCGTACCTCGTGGTGGACCC
CGTCGTCAAGGGCGAACCGAGAGCGCTCGATGACGGGGAGTTCATCGAGT
ACATTCGAGGCGTTTCGCTAGAAGAGGTGTGTGGGTGTGTGGGTGTGTGT
GCGCGCGTTTTTTTTTCTTCTTCTTTTTTTCGTCCTCACATTTTTTTCCA
GAGTTCGCAGGGGCGGCCTTGCCACGCGGGGCATCTTGCCAGAAAATCTG
AACCGTGGCCACACAGAAGGCTCGTATGTGTTTTTTGTTTGTTGGCGTCG
ACCTCGCTAGCCGGTTGACCAACGAAAAGACGCCAGCCTTTTTGCGGGCG
AGAAAAACGCAACAACGCTTATTTCCGACTCTCGTATTGGGTCGCTTCCT
GGGCGCTGAGAACCTTCTTGTGATGCTGTTCGTCCTCGCGTCCTCGCGTC
CTCACTTGCATGAAGGTGCGAGCGATGATTTACGCGGGAGACATGAGCGT
CACGTCTGGGTTCGCGGCGCTTATGGCTATCGAGAAGCTCCGGGAATTGG
GCCACATCATGTGACGTCACGTGTTCCGTCACATCACGTGATGGTTTGGC
TCGTCGAGCTCCGTTGTTGTCGTCGGTCGTCACAACAGGTTGTGCCTTTG
AAAAATAGCGAGTGTTGTTTTTTTGTTTTCTTTTACGACGGACGACACGG
TGGACTGAAAATGGAGAGAGACAGACAGAGACAGCGGGGTCAAACGCTTG
TCATTCGGTTGTTTTTAGTTTTTTTTTTTTGCGGTTTCGCCCCCTTGTCT
TTTTTTTTTCTTCTTTTTTGTGTCTGGTGAACGGGTGCGCATCAATGAGC
ACTGCGCAAGGCGTCGCGGGCCCTAAGCCTGTAACGGCTCCTTGACGGGA
TTGTAGACACACCGCGTCAAATGATGCTTCGCGGCCCTAGGATAGTGCTG
CGATTTCTGTGAGAGGCTCCGTAGCATCATGCTCCCTCCTCCGTCCAGAC
CCCGGCGTCCTTTGGGGCCCAAAGATGCGACTTTTGGTGGTTCTCCTTGC
TGGCGCACCCACCCAGCCGCGCCTTTTTGTAGGGGCCCAAAAGGGAGACG
GATATAAGTATAACGCGCTGTCATTTTTGGGATGTACTCTATTTTTGTTT
CTTGTTCTTGGGGCTCTGCAGGCGCGGATATTTTCTCTGTAAAGTCAGAG
CAGCGTATTGTAGTGCGTGGTGCGGGTCATCGATCGCACCAGATATAGTG
GATACCCCGCCCGCCGCACATCATCACACCGCGGTCGAGAAAACTGTCCT
GTTCCAGCAGTACAGGTTGGTCCGAGACAGGGCACCGCACCTGTTTTTTT
GTTTTTTTTGTTCTGCCTTCAGTTGGACAAACCCTTTCTGTGCTCGCTGG
GCGCGCCTCGCCGGTAGCTTGTCGGGGGGGGGTCCGTACTCATCTGTTGG
TTTAGGCCGTAGGTGTGTGGCCGTTTGCCAACCTTGCCCTAAACCTCTCT
TTTAAAGAATGGAGGTCCTTGGTGGTCCCCGAGTCGGAAAAGGGGGTTCT
TGTGGGTGCTCCGTGATTCTTGGTAGTATACGCTCGGCAAGCCTTTCTCC
CCCTCGTTCTCCGCGCAGGATTGGGCCTGGGCAGGGAGTGTGCCACGAGG
AAAGAGGGGTCTTTTTTGACCGCAGGAAGGGAGGGGTTGTGTGTGCCAAT
TTGTTTTGGCGTTTGCGACCGGCGGCTTTTTGTTCTTTCGATAAATTGTT
TTTTGAGACGGAACACGGCGGGCGGCTGGTCTGTTTCCCCGTCGCGGTCG
AAGCGAACAAGTCCTACCCTTTATTGCATGTGTTTTTTTTTGGGGGGGGG
AGAGGGGTCAGTAGTTTAACCGGTAAATTAACGCAATAAACG
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Coding sequence (CDS) from alignment at C-linearis_contig110:54575..62266-

>mRNA_C-linearis_contig110.1433.1 ID=mRNA_C-linearis_contig110.1433.1|Name=mRNA_C-linearis_contig110.1433.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at C-linearis_contig110:54575..62266- (Chordaria linearis ClinC8C monoicous)
ATGCGCAGCAGCGAAAAGAGCAAGGCGGGTGGCGCCCTTTCGGGGCTCTT
GTGGTGGAAAAAGATGCGCAGCAGCGAAAAGAGCAAGGCGGGTGGCGCCC
TTTCGGGGCTCTTGTGGTGGAAAAAGGGACCCAGCAACTCTACCGCCTTC
GACGCCACCGAGCACGTGTCGAAGACCCCGAACCTCACTCCGGTGGTGCG
GCACGAGGTCATGGTAGACCCACCGACATCGCGCGAGCTGACCTACGAGT
GCATCAGCGAAACGCATGGACCCAGCAACTCTACCGCCTTCGACGCCACC
GAGCACGTGTCGAAGACCCCGAACCTCACTCCGGTGGTGCGGCACGAGGT
CATGGTAGACCCACCGACATCGCGCGAGCTGACCTACGAGTGCATCAGCG
AAACGCATGCGTACAAAGGGTGGCGGAGTATCCTCCGACGAAAAATCCGG
GGGCCGCAGGGCAAGGTCCGATCGTACGACGTCATCACCCAGGAGCACCC
GTCTGTTCTCGTATTTACATGGGATACCCAGGCGTACAAAGGGTGGCGGA
GTATCCTCCGACGAAAAATCCGGGGGCCGCAGGGCAAGGTCCGATCGTAC
GACGTCATCACCCAGGAGCACCCGTCTGTTCTCGTATTTACATGGGATAC
CCAGACCAACACGACGACGATTCTGAAAGAGCACTACCCGGGGATGAACC
GCCTCATGTACGGAGTGGTCGGCGGGAACTACGAGGCGGATAAGCACACG
TCGGCGTTGCAGACCAACACGACGACGATTCTGAAAGAGCACTACCCGGG
GATGAACCGCCTCATGTACGGAGTGGTCGGCGGGAACTACGAGGCGGATA
AGCACACGTCGGCGTTGCAGGCCGCCGCGTGCGAGCTGGAGGAGGAGGCA
CATCTCCACGAGGGCACCTGGCACACCCTCATGAAGGACGAGAGAACGGT
AGCGGCGGCCGGGAAGTACTCGACGCAAATATTCTACTCGTACCTCGTGG
TGGACCCCGTCGTCAAGGGCGAACCGAGAGCGCTCGATGACGGGGAGTTC
ATCGAGTACATTCGAGGCGTTTCGCTAGAAGAGGCCGCCGCGTGCGAGCT
GGAGGAGGAGGCACATCTCCACGAGGGCACCTGGCACACCCTCATGAAGG
ACGAGAGAACGGTAGCGGCGGCCGGGAAGTACTCGACGCAAATATTCTAC
TCGTACCTCGTGGTGGACCCCGTCGTCAAGGGCGAACCGAGAGCGCTCGA
TGACGGGGAGTTCATCGAGTACATTCGAGGCGTTTCGCTAGAAGAGGTGC
GAGCGATGATTTACGCGGGAGACATGAGCGTCACGTCTGGGTTCGCGGCG
CTTATGGCTATCGAGAAGCTCCGGGAATTGGGCCACATCATGTGAGTGCG
AGCGATGATTTACGCGGGAGACATGAGCGTCACGTCTGGGTTCGCGGCGC
TTATGGCTATCGAGAAGCTCCGGGAATTGGGCCACATCATGTGA
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