prot_C-linearis_contig11.1418.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1418.1
Unique Nameprot_C-linearis_contig11.1418.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length618
Homology
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BLAST of mRNA_C-linearis_contig11.1418.1 vs. uniprot
Match: D8LKF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF9_ECTSI)

HSP 1 Score: 530 bits (1366), Expect = 6.090e-179
Identity = 350/652 (53.68%), Postives = 412/652 (63.19%), Query Frame = 0 
Query:    1 GTLLPSPEPQPAPIDRWARGCVVSRNTTTCDWTQSRHWGLTDVCSEEGRSLHSAKSMGTGLSGAPRHGG----HGRRRSLHSN-KKDETVIPFAIAPEAREDQSLPPWIPVEGNK-TRKGG-----KGXXXXXXXXXXXXXXXXXXXXXNNG-SEDSHRQEGDADNSLR-DDDVNSRVEELGGREWTVDGSGELLIVDRPRGDAMPKTVVSALYNFRDVNDK----EDGAAA---HTQNETGGGXXXXXXXXXXXXXXXXXSACTSVRDNKQSGSAMRRASRRRSSWRATAGRRRGSAMFFELEPTLQPNLTNSVDRPGAGVSVSDGSSFKKGPSWPEDPDHMSRSEYQERQRKQDLSDANTLDYGEDASTLGFSLGSVQSAPALGGIGLGQRGGGGVGVAGSGAEGGSGRRAVSGXXXXXXXXXSRRSITAFENVNPFAGGVRVATSMPQN------SGATAG-GDVSPLSASVEGQSGGDFFSGAGPETSSVGD-DDDPHLALVKDPEWGRNVDGPPKEAGYLPKVKHVSRERPLTHERPHTRNPRDPRNIPARKSPHVSPKGSTKNNGDKPGRGEGDDGSRSKAGMTGTSLPSSFPPLPMPLNGWGVQRVGFP-GSGGA------RGMKRHGVINMAKPKEILVEGLLR 617
            GTL PSPEP+  PIDRWARG V SR TT  DW +      +D  SE GRSL S +S  TG++ A RHG     H R R   S+ K+D + +PF +APE REDQSLPP IP    + +RKGG     +G                     + G SE     +G  D S R +DD++SR+++LGGREWT+DG+GELLIVDR +GDAMPKTVVSALYNFRDV DK    E+G             GG                  + +  ++ K+S  ++RRASR          RRRGS  FFELEPTLQPNL NS+DRPG GVSVSDG S K+GPSWP+DP+HMSRSEY+ERQR+QDL+ ++ LD GEDAS+LGFSLGSVQSAPAL G+GLG  G      AG G +GG        XXXXXX      SITAFE+VNPFAGG+RV TS P        +GA+   GD+SPL+ASV GQSG  FF GAGPE+SSVG+  DDPHLALVKDP+WGRNV G PKEAGYLPKVK VSRERPLTHERP+TRNPRDPRN+PAR + HVSPK ST +         G +      G  G S  SSFP LPM L GWG    G   G GG       RG K  G+I M KPKEI+V+GLLR
Sbjct:    3 GTLFPSPEPETPPIDRWARGWVASRRTTVRDWDRFPRGSSSDDGSEGGRSLRSVRSTATGMTSAHRHGXXXXXHARHRPHSSSCKEDSSGVPFPLAPEVREDQSLPPTIPGHSVRMSRKGGDSRAKRGRGGHCAKRTGANRGEGGRRQGSGGESESGCLWDGGTDGSDRQEDDLDSRLKDLGGREWTIDGAGELLIVDRVQGDAMPKTVVSALYNFRDVRDKLAGGENGGGGVXXXXXXXLDGGKRHRDGSGVGKTRGSISGSASFSKERKRSSLSLRRASRXXXXXXXXXXRRRGSGAFFELEPTLQPNLANSLDRPGPGVSVSDGGSLKEGPSWPQDPEHMSRSEYRERQRRQDLTGSSMLDGGEDASSLGFSLGSVQSAPALRGLGLGLNG---NAAAGGGRDGGXXXXXXXXXXXXXXGVGRGTSITAFEDVNPFAGGIRVDTSPPAGGDGRGAAGASGTRGDLSPLTASVGGQSG-SFFPGAGPESSSVGETSDDPHLALVKDPDWGRNVRGSPKEAGYLPKVKQVSRERPLTHERPYTRNPRDPRNVPARPNAHVSPKNSTSSR-------VGCNADPQYTGDDGGSTKSSFPSLPMSLTGWGEGGGGGSLGKGGGVPGRPMRGKKGRGMITMTKPKEIIVQGLLR 643
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKF9_ECTSI6.090e-17953.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3657313..3661836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1418.1mRNA_C-linearis_contig11.1418.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3657313..3661836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1418.1 ID=prot_C-linearis_contig11.1418.1|Name=mRNA_C-linearis_contig11.1418.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=618bp
GTLLPSPEPQPAPIDRWARGCVVSRNTTTCDWTQSRHWGLTDVCSEEGRS
LHSAKSMGTGLSGAPRHGGHGRRRSLHSNKKDETVIPFAIAPEAREDQSL
PPWIPVEGNKTRKGGKGGGRGGGRRGNRLGGGKGSGRGNNGSEDSHRQEG
DADNSLRDDDVNSRVEELGGREWTVDGSGELLIVDRPRGDAMPKTVVSAL
YNFRDVNDKEDGAAAHTQNETGGGGGRGGRGGRGRRKGSSGSACTSVRDN
KQSGSAMRRASRRRSSWRATAGRRRGSAMFFELEPTLQPNLTNSVDRPGA
GVSVSDGSSFKKGPSWPEDPDHMSRSEYQERQRKQDLSDANTLDYGEDAS
TLGFSLGSVQSAPALGGIGLGQRGGGGVGVAGSGAEGGSGRRAVSGGGGG
GGGGGSRRSITAFENVNPFAGGVRVATSMPQNSGATAGGDVSPLSASVEG
QSGGDFFSGAGPETSSVGDDDDPHLALVKDPEWGRNVDGPPKEAGYLPKV
KHVSRERPLTHERPHTRNPRDPRNIPARKSPHVSPKGSTKNNGDKPGRGE
GDDGSRSKAGMTGTSLPSSFPPLPMPLNGWGVQRVGFPGSGGARGMKRHG
VINMAKPKEILVEGLLR*
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