mRNA_C-linearis_contig11.1300.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: D7G511_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G511_ECTSI) HSP 1 Score: 899 bits (2323), Expect = 0.000e+0 Identity = 473/639 (74.02%), Postives = 523/639 (81.85%), Query Frame = 3
Query: 42 MLLSGIVRPRCTVP-RVRTSSFKYVVINSSRRGGARSGLSRSPAFRLASTLPDACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGMLSALGQSDPSAVAACLAAAERELEAVNARLSAEAGADLVGEGV----GREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLHYQHARHLSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQA---------NWRPL--TPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPDQA-IARTLVCERRLQRPTSGRAWEAYAIVMERDGNLREAFEARKVSFGFGIGQGGVGAN 1907
MLLSG+ R R P +R +S + V+ SS RS A RLASTLPD CGLPVVT+SW+AIKSLD+AYTEYANLSG+P+ RTQEALEHD SCVMAHC RG+L+AL QSDP AVA CLAAAER L+ G D VG+G +EGERERVFAATLRAW GRWREGALHLETWLMSAPVDLPALKL+QDAHLTLGDSANMRDCVGRVLPFWS+ATFGYGNVL MHAFGLVENG+YALAEERAD+ALA+Q TDIWAVHAMAHV+EMEARASEGCSFLT+CRDKWED +GPLQQHMAWH+GLFSLERGQE+RATRVFDTLLAPPREGG LDGAL+LPPP PFALTDASSLLWRMDLL VETGA RWRGVAEAWL YQHARHLSTFHDLHA+MAFAAMANGVEDDAEAE W+SRTR+ L+SM EYV++GG+A P + P + A T AA V+LH+FP+ +NR V G + EGG PPDNLWVAEH+GLPLC AM AYRGGEFD AVSLLLPLRY+L AIGGSKAQQDVVHLTLLDAALRLP++A +ARTLVCERRLQRPTSGRAWEA+A VMERDG++R+AFEARK+SF FGIGQGGVGAN
Sbjct: 1 MLLSGVARRRFAAPGALRAASVRRSVLGSSNSTRGCQAAPRS-ASRLASTLPDVCGLPVVTTSWQAIKSLDDAYTEYANLSGDPFLRTQEALEHDSSCVMAHCFRGLLAALSQSDPDAVAGCLAAAERGLQLQ--------GID-VGDGDDAARAKEGERERVFAATLRAWCGGRWREGALHLETWLMSAPVDLPALKLSQDAHLTLGDSANMRDCVGRVLPFWSDATFGYGNVLGMHAFGLVENGAYALAEERADMALAIQRTDIWAVHAMAHVFEMEARASEGCSFLTECRDKWEDTEGPLQQHMAWHLGLFSLERGQEARATRVFDTLLAPPREGGTLDGALLLPPPAPFALTDASSLLWRMDLLGVETGASRWRGVAEAWLQYQHARHLSTFHDLHALMAFAAMANGVEDDAEAEYWESRTRELLESMGEYVKSGGEAPAAXXXXXXXXXPAGGSEPTPASTAATPTAAP-VELHAFPVSRNRGVG-------------GDADEGGVEGPPDNLWVAEHVGLPLCRAMAAYRGGEFDEAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKATVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFEFGIGQGGVGAN 615
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: UPI00145FC157 (tetratricopeptide repeat protein n=1 Tax=Aromatoleum diolicum TaxID=75796 RepID=UPI00145FC157) HSP 1 Score: 214 bits (545), Expect = 2.160e-57 Identity = 180/567 (31.75%), Postives = 243/567 (42.86%), Query Frame = 3
Query: 186 TLPDACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGMLSALGQSDPSAVAACLAAAERELEAVNARLSAEAGADLVGEGVGREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLH-YQHARHLSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQANWRPLTPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPDQAIARTLVCERRLQRPTSG-------RAWEAYAIVMERDGNLREAFEARK 1862
TL D G+ V +S A++ L+ A + G+P +AL DP VM +C R +A C ++ LEA R S EAG L R ERER A RAW G L+ P D AL+ A LG S+ +RD V RVLP W E GYG VL MHAFGL E Y AE A A+ + D WA+HA AHV EM+ R ++G +LT+ +D W D H WH+ L+ L+ G R ++D + P L+ + DAS+LLWR+ L V+TG RW +A+AW +H + F+D HA+MAF A +G + + L L AA G N ++ +GLPLC A+ A+ G+ AV LL +R GGS AQ+D++HLTL++AALR +AR+LV ER Q+PTS RA A A E G+ A +AR+
Sbjct: 2 TLLDRRGVSVSATSHAALERLETATDLFNGYFGDPIAAIDKALAEDPQFVMGYCFRA----------GVLATCT---DKTLEA-ELRGSVEAGEALWR----RANERERGHIAAARAWLDGDIPAAVERWSAVLLEVPRDSLALQFAHLGDFYLGQSSMLRDRVARVLPDWDEGVAGYGYVLGMHAFGLEETALYDQAEHTARRAVELNRRDPWAIHAGAHVMEMQGRQADGIRWLTERQDDWAI-DNAFAFHNWWHLALYHLDLGDTGRVLELYDRAIRPRPSNVVLE------------MIDASALLWRLYLRGVDTGT-RWHELAQAWAPTVEHGYY--AFNDFHAMMAFVA------------------------------SGDERAAQTLLATLERRAAAGGT---------------------------------------------NGMMSREVGLPLCRALEAFGRGDHGRAVDLLQSVRCVAQRFGGSHAQRDIIHLTLVEAALRAGQGRLARSLVAERSAQKPTSPFNRALAIRAERAAAASREAGGHGLRAPDARQ 459
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: A0A3L7AKQ8_9HYPH (Tetratricopeptide repeat protein n=1 Tax=Xanthobacter tagetidis TaxID=60216 RepID=A0A3L7AKQ8_9HYPH) HSP 1 Score: 204 bits (518), Expect = 1.020e-53 Identity = 177/556 (31.83%), Postives = 241/556 (43.35%), Query Frame = 3
Query: 195 DACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGMLSALGQSDPSAVAACLAAAERELEAVNARLSAEAGADLVGEGVGREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLHYQHARHLSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQANWRPLTPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPDQAIARTLVCERRLQRPTSGRAWEAYAIVMERDGNLREAFEARK 1862
D GL V T+S KA+ LD A +Y N + + AL DPSCV+A C RG L L + AV L ELE +AG D+ ERER+ + L+AW G L E L P DL ALKL G + +R V L W EAT GY +V M+A+ L E G+YA AE A+ D+WA+H++AHV EM+ R EG +L RD W +K+ + H+ WH GLF + RA RVFD L+ +D +++ ++ L R+ + V+ G RW +AE H H+ F D H +A AA G D A R+ +QSMA + + G +W NA TT + + +PLCEAM+AY GG+ A +L P+R LA IGGS AQ+D+ L+DAA+R +AR L+ ER P R W Y V+ G L A +A +
Sbjct: 4 DVRGLDVTTTSPKAVAHLDLAVADYLNYGTSASAEVKAALAEDPSCVLAQCYRGYL--LMMLENPAVFPKLRQTLAELE--------QAGGDIT--------ERERLHLSALKAWVKGDLMNACLAWEQVLNQWPQDLMALKLHHTMAFYTGRNNVLRAVVAGALGAWDEATPGYSHVQGMYAYALEECGAYADAERWGRAAVEGNPEDLWAIHSVAHVMEMQGRFDEGADWLDYSRDDWANKNF-FKAHVWWHRGLFHIVAENYDRALRVFDEDLSSLNSETYID------------VSNQAAFLKRLQIAGVDVGN-RWDLLAEHSATRIHD-HILPFRDAHFCLALAA--KGRFDTA---------REQIQSMAVFAKDG--ESW---------NARTT----------------------------------------------------QAVLIPLCEAMIAYEGGDHAKACDILWPMRNELAPIGGSLAQRDLFAQILIDAAVRAGRLPMARNLLSERVALFPRGRRGWREYGKVLADLGELDLAAKAHR 452
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: A0A7X7PWE4_9GAMM (Tetratricopeptide repeat protein n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7X7PWE4_9GAMM) HSP 1 Score: 200 bits (508), Expect = 3.070e-52 Identity = 172/581 (29.60%), Postives = 243/581 (41.82%), Query Frame = 3
Query: 186 TLPDACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGMLSALGQSDPSAVAACLAAAERELEAVNARLSAEAGADLVGEGVGREG-ERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLHYQHARH--LSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQANWRPLTPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPDQAIARTLVCERRLQRPTSGRAWEAYAIVME------RDGNLREAFEARKVSFGFGIGQGGVG 1901
+L D G+PV T + + ++ ++A +P QE LE D AHCLR L L +D S L +EA+ E +GR ERER AA RAW G + L P DL AL+ A LG+S +RD + +VLP W E+ GY VL M+AFGL E G+Y+ AE+ AL + D WAVHA+AHV EM+ R EG FL + W ++ H WH+ LF L+ G + ++D + P + DAS+LLWR+ + V+ G RWR +A+AW Q A F+D+HA+MAFA G A R + AA T N + +GLP+ +A++++ G + + LLP+R GGS AQ+D++HLTL++AALR +AR LV ER + S W+ A V + R RE+ E R+ + G+G GVG
Sbjct: 2 SLVDCRGVPVSTRNVRCLQQYEQAVELAVGYYLDPLAILQEILEDDAQFAAAHCLRAALM-LTATDKSV----LPMLRESVEAI--------------ESLGRRAHERERAHAAAARAWLQGDFAGSIRSYGDILHDYPHDLVALQTAHIGDFLLGESTMLRDRIAQVLPQWDESIPGYSYVLGMYAFGLEETGAYSRAEDIGRRALELNGRDPWAVHAVAHVMEMQGRLREGIDFLGAHENAWA-RNNAFAFHNWWHLALFYLDIGDTGQVLALYDAKVRTASSQA------------PLEMIDASALLWRLHIRGVDVGE-RWRALADAW---QPAAEDAFYAFNDVHAIMAFAG----------------------------AHRLGLA--RKTIAAMERQAAGTHT---------------------------------------------NALMTREVGLPVAQAVISFALGHYAECIESLLPIRTIAHRFGGSHAQRDLIHLTLVEAALRAGKIKLARALVAERTQLKAASPFNWQLSARVSDAIGEADRAARARESAETRRRAHFAGLGAWGVG 471
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: A0A7V3XKZ6_9BACT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V3XKZ6_9BACT) HSP 1 Score: 199 bits (506), Expect = 4.690e-52 Identity = 172/556 (30.94%), Postives = 237/556 (42.63%), Query Frame = 3
Query: 153 LSRSPAFRLASTLPDACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGMLSALGQSDPSAVAACLAAAERELEAVNARLSAEAGADLVGEGVGREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALT--DASSLLWRMDLLAVETGAMRWRGVAEAWL-HYQHARHLSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQANWRPLTPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPDQAIARTLVCERRLQRPTSGRAWEAYA 1811
+ RS R + DA GLPV A+ ++A EY + G+P +EAL P V+ H R + + + ER L A AR+S A A+ + G ERER A R G W + L+ P D A++ A GD+ N+R+ + RVLP W+ + GY +L MHAFGL E Y AEE A AL ++ D WAVHA+AHV EM+ R EG +LT W +G H WH+ LF L+R + + A ++DT V P PP FAL DA++LLWR+ L V+ G R VA+ W R F+DLHA+MAF +AEA L + + GG++N +A +GLPLC A+ A+ ++ A+ L P+R GGS AQ+DV+ LTL++AALR A+AR + ER + RP SG W A
Sbjct: 9 IERSAPGRARGSAKDARGLPVSCGDRAALDLHEKALREYQSYVGDPIATIEEALRLAPDFVLGHVFRATV-------------LMTSTERRL-AEQARVSV-ASAEALLSGAN---ERERGLAGAARRLVDGDWDGACAAFDRVLVDHPRDAFAIQSAHLMDFFRGDALNLRNRISRVLPHWNASVPGYSYILGMHAFGLEECNQYPQAEETARRALDLERRDGWAVHAVAHVMEMQGRVDEGVEWLTSREADWAPDNG-FAFHNYWHLALFHLDRQRHADALALYDTR--------------VHPAPPEFALQLLDATALLWRLHLDGVDLGG-RAGVVADNWAARLDTERGFYAFNDLHAMMAFTMAGR----EAEAAR-------LLADLEWSIEHGGRSN---------------------------------------------------------------RMMAREVGLPLCRAIRAFGRQRWEDAIVDLEPVRDVAWRFGGSHAQRDVLTLTLIEAALRSGQPALARHYIAERTVHRPASGWGWRLLA 456
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: UPI0005F7CE9F (tetratricopeptide repeat protein n=1 Tax=Frankia sp. DC12 TaxID=683315 RepID=UPI0005F7CE9F) HSP 1 Score: 198 bits (503), Expect = 8.740e-52 Identity = 170/530 (32.08%), Postives = 223/530 (42.08%), Query Frame = 3
Query: 195 DACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGMLSALGQS-DPSAVAACLAAAERELEAVNARLSAEAGADLVGEGVGREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLHYQHARHLSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQANWRPLTPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPDQAIARTLVCERRLQRP 1781
D G+PV A+ LD+A + L+G+P + A+ D +A R LS + D +A A L L +A+L+ G ERE A RAW+ G W L+ L++ P DL ALK+AQD LGD +RD V RVLP W +G V M+AFGL ENG Y AE+ A ALA D+WAVHA+AHV+EME R + G SFLT W +D H WH+GL+ LE G+ A ++D + R LD + DA++LLWR+DL + A A + + F+D HAVMAF D A A A+ V AA +AA P N AE G L A A+ GE TAV LLL LR A+GGS AQ+D++ LTL+ AA R +AR L ER ++P
Sbjct: 7 DRWGVPVRAFDGGAVGLLDQAIEDLVALAGDPVGGAEAAIAADGELALARIFRAYLSLYATTADGAAEAGQLL---EPLGPADAKLAE-----------GPRSEREAHHLAAARAWADGDWHAATRALDRALLANPRDLLALKIAQDLSFFLGDRRELRDVVARVLPAWPPTDPAWGFVQGMYAFGLEENGDYRGAEDAARQALARHPRDVWAVHALAHVFEMEGRLTPGVSFLTSSAPDW--RDSYFAVHNWWHLGLYLLELGRTDDALALYDERVRAARSTEWLD------------VVDAAALLWRLDLYGTDVTARA--AALAADIRDLVSTPTYIFNDWHAVMAFGLAG----DHARA--------------AQVV------------------AANQDLAA-----------------------------------------PTNRRAAERAGRGLLTAFSAFAAGEPHTAVDLLLGLRSEAHAVGGSHAQRDIIDLTLIAAAARSGQAGLARALTTERVARKP 429
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: A0A524QEY1_9GAMM (Tetratricopeptide repeat protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A524QEY1_9GAMM) HSP 1 Score: 196 bits (497), Expect = 4.360e-51 Identity = 158/540 (29.26%), Postives = 236/540 (43.70%), Query Frame = 3
Query: 189 LPDACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGMLSALGQSDPSAVAACLAAAERELEAVNARLSAEAGADLVGEGVGREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLHYQHARHLSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQANWRPLTPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPDQAIARTLVCERRLQRPTSGRAWEAY 1808
+ D G+ + + +++++ + A + G+P EALE DP M H LRG + L + S + E++ A+L+ DL R +RER A L W +G W L+ L P DL AL++ + GD N+R V R +P W+ GY +L MHAFGL E GSYA+AEE AL ++ D WA H +AHV EM+AR +EG +F+ W D + H WH L++L++ + R ++D EG + + A + L DA +LLWRM L ++ G RW VA+ + F+D+HA+MAFAA T AAAA +L A + + GEG N + +GLP+ + A+R + A+ L+P+RY GGS AQ+D+VH TL++AALR D+A+A L ER +P +W+ +
Sbjct: 1 MKDQRGVDASSDNSQSLETYERALRAFNTYRGDPVAIIDEALETDPDFAMGHVLRGHIH-LSMWEKSVLP--------EIKKSVAKLN-----DLDN----RNNDRERRHARALDQWVSGDWDGARGTLDRLLAEYPRDLLALQIGHLSDFFHGDRENLRGRVARAMPAWTRDDSGYAFLLGMHAFGLEECGSYAVAEEAGRHALDLEPDDCWAQHELAHVMEMQARQAEGIAFMEGRTAHWAQTDNAFRFHNWWHTALYNLDQDRFERTLEIYD-------EGVRSEPAEIQ-----LMLLDAVALLWRMHLRGLDVGN-RWSEVADLY-EKDDEDGFYAFNDMHAMMAFAA-------------------------------------------------TDRSAAAATRL--------------------AAMEAAAEGEG------TNAMMMRMVGLPIARGIEAFRRERYGEAIGYLMPVRYRAHVFGGSHAQRDIVHRTLIEAALRDGDKALATALSNERTSLKPNCPFSWQLH 433
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: TTC38_XENLA (Tetratricopeptide repeat protein 38 n=2 Tax=Xenopus laevis TaxID=8355 RepID=TTC38_XENLA) HSP 1 Score: 188 bits (478), Expect = 3.240e-48 Identity = 157/551 (28.49%), Postives = 242/551 (43.92%), Query Frame = 3
Query: 204 GLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEAL-----EHDPSCVMAHCLRGMLSALGQSDPSAVAACLAAAERELEAVNARLSAEAGADLVGEGVGREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPP--REGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLHYQHAR-HLSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQANWRPLTPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPD---QAIARTLVCERRLQRPTSG------RAWEA 1805
GL + T+S + K D +YA + E DP+ VM H L +G V ++EL+ +S + + + ERE++ A + ++ G + A E L S P DL ALK A D + LG+ MRD V RVLP+W T V M++FGL+E Y A + A ALA++ TD W+VH +AHV+EM+A G SF+ + + W+ D L H+ WH L+ +E+G A ++D +AP G LD + D SS+L+R+ + V G RW+ + + + +H + H+ F+DLH +M+ + G +D+ TR ++SM E ++ G+ Q HS + +HLG PLC+A++ Y GG +D AV L+ P+RY + IGGS AQ+D+ + L+ AA+ Q +AR L+ ER + RP S + WEA
Sbjct: 16 GLTLSTTSNEVCKLFDATLIQYATWKNDSTLGGIEGCLSRINNTDPNFVMGHVAANGLELIGTGRSPLV-------DKELDDALKTMSDLSKSQALT-------EREKLHVAAVETFADGNLPKAADLWERILQSHPTDLLALKFAHDCYFYLGEQRQMRDSVARVLPYWKPETPLSSYVKGMYSFGLLETNFYDQALKVAKEALAVERTDSWSVHTIAHVHEMKADLDSGLSFMQETENNWKGSD-MLACHVYWHWALYLIEKGDYEAALTLYDNHIAPQCFASGSMLD------------VVDNSSMLYRLQMEGVNVGD-RWKNLVQ--ITKKHTKDHMLIFNDLHFLMS----SLGSKDE-------DTTRQLVESMQELSKSPGEK-----------------------QQHS---------------------------------------LIKHLGAPLCQALIEYNGGNYDKAVDLIYPIRYQILKIGGSDAQRDLFNQVLIQAAINSDSTHHQNLARVLLMERDIGRPNSPLTQRLIKKWEA 463
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: E3IZ83_FRAIE (Uncharacterized protein n=2 Tax=Frankia TaxID=1854 RepID=E3IZ83_FRAIE) HSP 1 Score: 187 bits (476), Expect = 3.810e-48 Identity = 161/529 (30.43%), Postives = 218/529 (41.21%), Query Frame = 3
Query: 195 DACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGMLSALGQSDPSAVAACLAAAERELEAVNARLSAEAGADLVGEGVGREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLHYQHARHLSTFHDLHAVMAFAAMANGVEDDAEAELWQSRTRDFLQSMAEYVRTGGQANWRPLTPPLSENAATTGVAAAAVQLHSFPIDQNRSVAKCGTSAAAGARDEGSSGEGGGSPPPDNLWVAEHLGLPLCEAMVAYRGGEFDTAVSLLLPLRYNLAAIGGSKAQQDVVHLTLLDAALRLPDQAIARTLVCERRLQRP 1781
D G+PV + A+ LD+A + L+G+P + A+ D +A R L+ + +A A + LE + ++ A + RE A RAW+ G W L L++ P DL ALK+AQD LGD +RD V RVLP W E +G V M+AFGL EN Y AE+ A ALA D+WAVHA+AHV+EME EG +FLT W +D H WH+GL+ LE+G+ A ++D + LD + DA++LLWR+ L + R +A F+D HAVMAF D A A + RD LT P + AA E G L A A+ GE TAV LLL LR + A+GGS AQ+D++ LTL+ AA R +AR LV ER ++P
Sbjct: 7 DRWGVPVRAADGGAVGVLDQAIEDLVGLTGDPVGGAEAAIAADGELALARIFRAYLALYATTADG-----VAQAGQLLEPLGPADASPAAS------------REAHHLAAARAWADGDWHAATRALRRALVANPRDLLALKIAQDLSFFLGDRRELRDLVARVLPAWPETDPAWGFVQGMYAFGLEENADYRAAEDAARRALARGPRDVWAVHALAHVFEMEGSLPEGVAFLTSSAPDW--RDSYFAVHNWWHLGLYLLEQGRADDALALYDERVRAVSSTEWLD------------IVDAAALLWRLALYGTDV-TTRAAALATDIRDLVGGAPTYIFNDWHAVMAFGLAG----DHARAAQVVAANRD-------------------LTAPANRQAA------------------------------------------------------ERAGHGLLTAFSAFADGEPRTAVDLLLDLRSDAHAVGGSHAQRDIIDLTLIAAAARSGQAGLARALVTERVARKP 426
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Match: A0A5J6MR69_9PROT (Tetratricopeptide repeat protein 38 family protein n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MR69_9PROT) HSP 1 Score: 186 bits (473), Expect = 1.320e-47 Identity = 132/374 (35.29%), Postives = 186/374 (49.73%), Query Frame = 3
Query: 189 LPDACGLPVVTSSWKAIKSLDEAYTEYANLSGNPYQRTQEALEHDPSCVMAHCLRGM--LSALGQSDPSAVAACLAAAERELEAVN-ARLSAEAGADLVGEGVGREGERERVFAATLRAWSAGRWREGALHLETWLMSAPVDLPALKLAQDAHLTLGDSANMRDCVGRVLPFWSEATFGYGNVLAMHAFGLVENGSYALAEERADVALAMQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDKWEDKDGPLQQHMAWHMGLFSLERGQESRATRVFDTLLAPPREGGQLDGALVLPPPPPFALTDASSLLWRMDLLAVETGAMRWRGVAEAWLHYQHARHLS-TFHDLHAVMAFAAMANGVEDDAEAELWQSR 1298
L D G P T + A+++ + A LSG+P + A+ +P V+ H + + L + ++ LA AE L ARL R + AA RAWS+G W++ E L+ P DL A+K+ QD + LGD+AN+RD V RVLP WSEA GY +L M +FGL ENG Y AE A+A + D WA HA+AHV EM+ R +G +FL+ W + H WH+ L+ L++G + A ++D P GG D P L DASSLLWR+ L+ E G RW+ +A+ WL HA + F+D HA+MAF G +D +AE ++R
Sbjct: 3 LTDRWGEPTDTDNRAALEAYERAVQGMVALSGDPLAEIRGAVAIEPGFVLGHLVEALFHLYPMTRAQSQEALGSLARAEAALRPTTPARL------------------RGHLHAA--RAWSSGHWQDATAAWEAVLLDHPHDLLAVKVLQDLYFFLGDAANIRDTVARVLPNWSEAEPGYSYLLGMLSFGLEENGDYQQAERMGRGAIARDAYDPWAHHAIAHVLEMQGRVGDGIAFLSGGAPYWAQSFFAV--HNWWHLALYELDQGDGNAALDLYDG----PLRGGVSDQ--------PLDLVDASSLLWRLKLVGFEAGQRRWQALAKLWL--PHAEDMVYCFNDAHAMMAFV----GAGEDRQAEALRAR 336 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1300.1 >prot_C-linearis_contig11.1300.1 ID=prot_C-linearis_contig11.1300.1|Name=mRNA_C-linearis_contig11.1300.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=623bp MLLSGIVRPRCTVPRVRTSSFKYVVINSSRRGGARSGLSRSPAFRLASTLback to top mRNA from alignment at C-linearis_contig11:2413905..2420354+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1300.1 ID=mRNA_C-linearis_contig11.1300.1|Name=mRNA_C-linearis_contig11.1300.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6450bp|location=Sequence derived from alignment at C-linearis_contig11:2413905..2420354+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:2413905..2420354+ >mRNA_C-linearis_contig11.1300.1 ID=mRNA_C-linearis_contig11.1300.1|Name=mRNA_C-linearis_contig11.1300.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3738bp|location=Sequence derived from alignment at C-linearis_contig11:2413905..2420354+ (Chordaria linearis ClinC8C monoicous)back to top |