mRNA_C-linearis_contig11.1185.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1185.1
Unique NamemRNA_C-linearis_contig11.1185.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: D8LGE2_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE2_ECTSI)

HSP 1 Score: 626 bits (1614), Expect = 7.010e-215
Identity = 304/419 (72.55%), Postives = 343/419 (81.86%), Query Frame = 1
Query:  163 ILLGAGVALLLSVPGECF-ALFTKPAV--KMAD--QMAMKLDEYRGANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSFGSFEDNWFGFMAVSTNEGKKEMVIVFRGTETDKEWIENANMFMEQLDGEPEESGLATIFNRSNLMCHRGFQQLYREKAEQFVSPKDRIYEVLKDYKEE----LDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDTPILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISLRNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPTRDVALMNKVGNVIPDEYCRKHNISPQWHSQTYPRTIY 1392
            +   A  AL LSVP   F AL TKPA   KM D  +   KLDEYRGAN+WKGLIP   E R WDEGF+SFLLKYGMFNH+VYDVFIK EDDF+ + TGLRG SRFG D  AF+ KG++F+YVN KGEKKQEYDF+ DY IV NLVCSPDSF S EDNWFGF+ +S +  KKEMVIVFRGTET KEWIENA +FMEQLDGEP ESGLA + NR  LM H GFQQLYREKA+QF SPKD+IYEV++ +K +    ++KVTVVGHSLG AMAQ CAVDLAHS+ LGD PILG+AWAAPK GN+AL+AWVAKQP LR+LRVR+PID V NVPPDW+W++ +GGYKHMGTEI+L N HLHK GVVK DDGNSPNHNLQQYLH IDPTRDVALMNKVGNVIPD+YCRKH ISP WHS T+PRT+Y
Sbjct:    5 VFRAAPAALFLSVPASSFSALSTKPATPAKMPDSGEGVCKLDEYRGANNWKGLIPSVTEPRVWDEGFRSFLLKYGMFNHVVYDVFIKGEDDFKSEETGLRGRSRFGDDFTAFSEKGLKFNYVNKKGEKKQEYDFTDDYTIVANLVCSPDSFFSAEDNWFGFIGLSKD--KKEMVIVFRGTETTKEWIENATLFMEQLDGEPPESGLALLLNRDTLMVHSGFQQLYREKADQFPSPKDKIYEVIEAFKNDDKVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLAWAAPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSITTGGYKHMGTEITLDNTHLHKAGVVKSDDGNSPNHNLQQYLHNIDPTRDVALMNKVGNVIPDDYCRKHGISPSWHSLTFPRTVY 421          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: A0A6H5KDS9_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS9_9PHAE)

HSP 1 Score: 595 bits (1535), Expect = 9.700e-203
Identity = 288/418 (68.90%), Postives = 331/418 (79.19%), Query Frame = 1
Query:  157 THILLGAGVALLLSVPGECFALFTKPAVKMAD--QMAMKLDEYRGANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSFGSFEDNWFGFMAVSTNEGKKEMVIVFRGTETDKEWIENANMFMEQLDGEPEESGLATIFNRSNLMCHRGFQQLYREKAEQFVSPKDRIYEVLKDYKEE----LDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDTPILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISLRNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPTRDVALMNKVGNVIPDEYCRKHNISPQWHSQTYPRTIY 1392
            + +  GA V  L SV    +        KM D  +   KLDEYRGANHWKGLIP A E R WDEGF+SFLLKYGM NH+VYDVFIK ED+ + + TGLRG SRFG    AF+ KG+ F+YVN KGE+KQEYDF+ DY IV NLVCSP+SF S EDNWFGF+ +S +E  KE+VIVFRGTET KEWIENA +FMEQLDGEP ESGLA + NR+ LM H GFQQLYREKA+ F SPKD+IYEV++ +K +    ++KVTVVGHSLG AMAQ CAVDLAHS+ LGD PILG+ WA PK GN+AL+AWVAKQP LR+LRVR+PID V NVPPDW+W++ +GGYKHMGTEI+L N HLHK GVVK DDGNSPNHNLQQYLH IDPTRDVALMNKVG VIPD+YCRKH ISP WHS T+PRTIY
Sbjct:   25 SQLAFGADVFFLSSV----YEAGLPTPAKMPDSGEGVCKLDEYRGANHWKGLIPSATEPRVWDEGFRSFLLKYGMLNHVVYDVFIKGEDEVKSEETGLRGRSRFGDKLTAFSEKGLRFNYVNKKGEQKQEYDFTDDYTIVANLVCSPESFFSAEDNWFGFIGLSKDE--KELVIVFRGTETTKEWIENATLFMEQLDGEPPESGLALLLNRNTLMVHSGFQQLYREKADHFPSPKDKIYEVIEAFKNDNKVSIEKVTVVGHSLGAAMAQHCAVDLAHSRVLGDVPILGLGWAGPKGGNAALAAWVAKQPNLRILRVRVPIDFVTNVPPDWMWSMTAGGYKHMGTEITLDNTHLHKAGVVKSDDGNSPNHNLQQYLHNIDPTRDVALMNKVGTVIPDDYCRKHGISPSWHSLTFPRTIY 436          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: D7FQN1_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN1_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 4.970e-152
Identity = 226/385 (58.70%), Postives = 285/385 (74.03%), Query Frame = 1
Query:  265 KLDEYRGANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSFGSFEDNWFGFMAVS-TNEGKKEMVIVFRGTETDKEWIENANMFMEQLDGEPEESGLATIFNRSNLMCHRGFQQLYREKAEQFVSPKDRIYEVLKDYKEE--LDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDTPILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISLRNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPTRDVALMNKVGNVIPDEYCRKHNISPQWHSQTYPRTIY-HK*ST 1407
            KLDEYRG+NHW+GL P   E RTWDEGF+SFLLKYGM NH+VYDVF K +   +D ATGLR  SRFG + + F A G+EFSYVN  GE+KQEYDFS +Y++  NLVCSP +F   EDNWFGF+A+S  + G KEMV+VFRGTET KEW  NA + M  L+G  + S L   + R NLMCH GFQQLY  K + F SP+  I+E +K + E+  +DKVTVVGHSLG AM Q CA+DLA+S   GD PIL +AW APKVGN  L+ WV +QP LR+LR+ + +D+V  +PPDW+  + SGGYK  GTE+ L N  + K+G+++ D GNSP+H L+QYLH I+P+RDVAL+NK  NV+P+EYC +HNI+P WHSQT+PRT+  HK ST
Sbjct:   17 KLDEYRGSNHWEGLHPSIEEPRTWDEGFRSFLLKYGMVNHMVYDVFQKGKHGVKD-ATGLRARSRFGENLEDFNALGLEFSYVNMAGEQKQEYDFSNEYEVQANLVCSPSAFAVKEDNWFGFIAISKADHGGKEMVVVFRGTETVKEWARNAKVKMVPLEGAKQLSTLELGWARWNLMCHEGFQQLYIGKPKHFESPRTVIHEQIKKWVEKGRVDKVTVVGHSLGAAMCQLCAIDLAYSNVGGDIPILALAWGAPKVGNKTLATWVTEQPNLRILRISVAVDTVIRLPPDWVGFLLSGGYKATGTELILSNMQMQKQGLLRLDVGNSPHHCLEQYLHVIEPSRDVALLNKTCNVLPEEYCLEHNIAPAWHSQTWPRTVPGHKEST 400          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: A0A6A4P8C9_LUPAL (Phospholipase A1 n=2 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4P8C9_LUPAL)

HSP 1 Score: 128 bits (322), Expect = 7.910e-28
Identity = 115/394 (29.19%), Postives = 170/394 (43.15%), Query Frame = 1
Query:  244 MADQMAMKLDEYRGANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSFG---------SFEDNWFGFMAVSTNEGKK-----EMVIVFRGTETDKEWIENANMFMEQLDGEPEESGLATIFNRSNLMCHRGFQQLYREKAEQFVSPKDRIYEV---LKDYKEELDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDTPILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISLRNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPT--------------RDVALMNKVGNVIPDEY 1332
            + D +A K  E  G NHW+GL+         D     ++++YG      YD FI       + A+   G  R+        AKG  FS V  K     +Y  +K      +    PD+F          S E NWFGF+AVST+EG K     ++VIV+RGT    EWI   N F   L   P+  G       ++   H G+  +Y     +  + +  + EV   +K YK+E   +TV GHSLG A+A   AVD+  + +    P+    + +P VG+      V+    LR+LR+    D V N     L+     G  H+G  +++      K   +K    +   H L+ YLH +  T              RD+AL+NK   V+ DEY
Sbjct:   54 LEDNVAKKWHELNGQNHWEGLLDPL------DIDMGGYIIQYGELAQSTYDAFIT------ETASKYAGKCRY--------AKGDFFSKVGLKNGNHFKYGVTKFVYYATSSNPLPDAFVIKSSSKEALSTESNWFGFVAVSTDEGTKVLGRRDIVIVWRGTSQRSEWI---NDFKFLLVSAPKVFG-----ENADPKVHLGWYSIYNSDDSKTSAREQVLSEVQKLVKLYKDEEVSITVTGHSLGAAVATLNAVDIVANGYNKGAPVTAFVFTSPGVGDDNFKRVVSGYKDLRILRIENEYDPVPNHLITGLF-----GCSHVGEVLNIDTT---KSPYLKSFILHPNTHTLEVYLHGVAGTQGTKGEFKLDEMINRDIALVNKYSAVLEDEY 411          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: A0A2G3ANB7_CAPAN (Phospholipase A1 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3ANB7_CAPAN)

HSP 1 Score: 125 bits (315), Expect = 6.100e-27
Identity = 106/392 (27.04%), Postives = 187/392 (47.70%), Query Frame = 1
Query:  250 DQMAMKLDEYRGANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSFGSFEDNWFGFMAVSTNEGK-----KEMVIVFRGTETDKEWIENA-NMFMEQLDGEPEESGLATIFNRSNLMCHRGFQQLYRE--KAEQF---VSPKDRIYE----VLKDYKEELDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDTPILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGG----YKHMGTEISLRNEHLHKEGVVKGDDGNSPNHNLQQYLHCI------------DPTRDVALMNKVGNVIPDEY 1332
            + +A + +   G  +W+GL+         D   + +L+ YG     +YD F  NE+     A+  RG SR+ S  + FT  G++ +          +Y+ +K      ++    +     E NW GF+ V+T+EGK     ++++I +RGT    EW ++  N  ++ ++   E++        +N++ H+GF  +Y    +A  F    S +D+++E    +LK Y +E   +TV GHSLG A+   CAVD+  ++   + P+    + +P+VG +           L++LR+    D ++ + PD      SG     Y+++G E+S+      K G +K D      H L+ YLH I            +  RD+AL+NKV +V+ DEY
Sbjct:   48 NSIAERWEILSGKTNWEGLL------YPLDYDLRRYLIHYGQMPQAIYDSF-NNEE-----ASKYRGTSRY-SKKNLFTRVGLDKN-------NPYKYEITKYVYAASHVPSKTEKVK--ESNWIGFVGVATDEGKVALGRRDILIAWRGTRRGSEWNDDCENSLVQPIEIFGEKT--------NNILVHKGFYSIYTSLNEASDFNRTTSARDQVFEEVTSLLKQYSKEEVSITVTGHSLGSALGTLCAVDIVANQINKEFPVTAFLFGSPRVGEANFKKAYENLKNLQILRICNATDHIS-LKPDRGPVEGSGTEWREYENVGLELSIDTT---KSGYLKKD---ISGHILEVYLHGIAGAQGANGQFKLEVNRDIALVNKVADVLKDEY 402          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: UPI0002767B14 (phospholipase A1-II 1-like n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=UPI0002767B14)

HSP 1 Score: 124 bits (310), Expect = 1.600e-26
Identity = 115/399 (28.82%), Postives = 185/399 (46.37%), Query Frame = 1
Query:  250 DQMAMKLDEYRGANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSFGSFEDNWFGFMAVSTNEGK-----KEMVIVFRGTETDKEWIENANMFMEQLDGEPEESGLATIF--NRSNLMCHRGFQQLYRE--KAEQF---VSPKDRIYEVLK----DYKEELDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDTPILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPP-------DWLWTVFSGGYKHMGTEISL---RNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPT------------RDVALMNKVGNVIPDEY 1332
            + +A + +   G N+W+GL+         D   + +L+ YG     +YD F  NE     + +  RG SR+ S  + FT  G+           + +Y+ +K +        S  +      NW GF+AV+T+EGK     ++++IV+RGT T  EW ++    M Q    P E     IF  N  N++ H+GF  +Y     A  F    S +D++ E +K     YK+E   ++V GHSLG ++A  CA+D+A S+     P+    +A+P+VG             L +LR+    D +  +P        +  W V    Y+ +G E+S+   ++++L KE  + G       H L+ YLH I  T            RD+ALMNK  +V+ DEY
Sbjct:   30 NNIAERWEILSGKNNWEGLLDPL------DYDLRRYLIHYGQMPQAIYDSF-NNE-----KVSKYRGTSRY-SKKNLFTRVGLH----------RNKYEITKYF-----YGASSKTEKVKVSNWIGFVAVATDEGKVALGRRDILIVWRGTITVSEWNDDFESSMVQ----PIE-----IFRENTDNILVHKGFYSIYTSLNHASNFNRTTSARDQVLEEVKRLMDQYKKEEVSISVTGHSLGSSLATLCAIDIAVSQVNKGFPVTAFLFASPRVGEINFKKACENLKNLHILRITNASDLITKLPDRGQVEGCETDWRV----YEDVGFELSIDTTKSDYLKKE--ING-------HILEVYLHGIAGTHGFEGEFKLEMNRDIALMNKADDVLKDEY 378          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: A0A5N6QB05_9ROSI (Phospholipase A1 n=4 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6QB05_9ROSI)

HSP 1 Score: 121 bits (304), Expect = 8.150e-26
Identity = 110/405 (27.16%), Postives = 177/405 (43.70%), Query Frame = 1
Query:  250 DQMAMKLDEYRGANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSF---------GSFEDNWFGFMAVSTNEGK-----KEMVIVFRGTETDKEWIENANM-FMEQLDGEPEESGLATIFNRSNLMCHRGFQQLY-----REKAEQFVSPK---DRIYEVLKDYKEELDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDTP---------ILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISLRNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPT------------RDVALMNKVGNVIPDEY 1332
            D +A K ++  G ++W+ L+         D   + +++ YG      YD F        ++ +   G SR+G        K   FS VN +     +Y  +K +    N+   P++F          S E NW G++AVST+EGK     +++V+ +RGT    EWI +    F+   D          + +  +   H G+  +Y     R    +  + K   D I  +L++YK+E   +TV+GHSLG A+A   AVD+  ++F  + P         +  I +A+P+VG+S+     A+   LR LR+R   D V N P          GY  +G E+ +     H    +K        HNL+ YLH +               RDVAL+NK  + + DEY
Sbjct:    2 DSIAKKWEKLSGQDNWEDLLSPL------DIDLRRYIIHYGEMTQATYDAFDS------EKVSRFAGSSRYG--------KKDFFSKVNLENGNPFKYKVTKFFYATSNIQV-PEAFIIKSLSREAWSKESNWMGYVAVSTDEGKVVLGRRDIVVAWRGTVQTLEWINDLEFDFVSASD---------ILGDEGDPKVHHGWYSIYTSDDPRSPFNKTCARKQVLDEIRSLLEEYKDEEISITVIGHSLGAAIATLNAVDIVANEF--NKPKDEQRRACLVTTIVFASPRVGDSSFKRVFARYKDLRALRIRNGPDFVPNYPLI--------GYSDVGEELEIDTRESH---YLKSLGNQKTWHNLECYLHGVAGVAGRIGGFKLRVHRDVALVNKTADALKDEY 363          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: UPI001FB06DF0 (phospholipase A1-IIgamma-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB06DF0)

HSP 1 Score: 120 bits (302), Expect = 1.140e-25
Identity = 106/399 (26.57%), Postives = 178/399 (44.61%), Query Frame = 1
Query:  283 GANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSFGSFEDNWFGFMAVSTNEGKKEM-----VIVFRGTETDKEWIENANMFMEQL--------DGEPEESGLATIFNRSNLMCHRGFQQLYR----EKAEQFVSPKDRIYE----VLKDYKEELDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDTPILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISL--RNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPT------------RDVALMNKVGNVIPDEYCRKHNISPQWHSQT 1374
            G  +W+GL+         DEG +++++ YG      YD +        D+++   G S++  D   F+  G+      +KG   ++Y  +K      ++          + NW G++AVST++GK+E+     VI +RGT  + EW+ +A+ F++          D +PE               HRGF  +Y     E      S +D++ E    +L+ YK E   +TV GHSLG A+A   A+D+A +     +P+   A+A+P+VGNS +         LR+LR+    D V +VP        + GY ++G  + +  R     K  +          HNL+ YLH +  T            RD++L+NK  + +  EY     I   W ++T
Sbjct:    9 GEKNWEGLLSPL------DEGLRNYIIHYGEMAQATYDAYDS------DESSKTGGNSKYPMDK-LFSDVGL------AKGRANKKYTITKFLYATASVPLFDK-----DTNWMGYVAVSTDDGKRELGRRDIVIAWRGTSEEIEWVTDASFFLQPAPIIFGDVHDDKPE--------------VHRGFYLIYTSNNPESTFNKTSARDQVLEEVTRLLEIYKNEEVSITVTGHSLGAALATISAIDIAKN-MTSRSPVTAFAFASPRVGNSEVRDSALSINNLRILRIENKPDVVPDVP--------NLGYANVGQVLIMDTRKSMFLKHNLFDFFSSVGMAHNLEVYLHGVSGTVDGGEGFKKKVDRDLSLINKYDDYLKTEY----GIPGSWWNKT 356          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: A0A7J7I1Q6_CAMSI (Phospholipase A1 n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7I1Q6_CAMSI)

HSP 1 Score: 121 bits (304), Expect = 1.290e-25
Identity = 107/397 (26.95%), Postives = 182/397 (45.84%), Query Frame = 1
Query:  283 GANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSF---------GSFEDNWFGFMAVSTNEG-----KKEMVIVFRGTETDKEWIENANMFM---EQLDGEPEESGLATIFNRSNLMCHRGFQQLYREKAEQF----VSPKDRIYE----VLKDYKEELDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDT-------PILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISL---RNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPT------------RDVALMNKVGNVIPDEY 1332
            G  +WKGL+         D   + +++ YG    + YD FI       D+ +   G SR+    D F   G++             Y  +K Y    +    PD+F          S E NW G++AV+T+EG     ++++V+ +RGT    EW+ +  + +    ++ GE ++          +   H+GF  +Y     +      S +D++ E    ++++Y+ E   +TVVGHSLG A+A   A D+A +     +       P+    +A+P+VG+S     ++    LRVLRVR  +D V  VP          GYK++G ++++   ++E+L K G +K        HNL+ YLH +  T            RD+AL+NK+ + + DEY
Sbjct:   16 GEENWKGLLDPL------DIDLRRYIIHYGEMTQVTYDNFIS------DKLSKYAGSSRYAK-TDLFAKLGLD----------PLMYRVTK-YLYATSSTQVPDAFILKSLSREAWSKESNWMGYVAVATDEGMAKLGRRDIVVAWRGTHQALEWVNDLQILLVSPSKILGEQDD----------DTKVHQGFYSIYTSNDPRSPFTKTSARDQVLEEVRRLVEEYQNEEISITVVGHSLGAAIATLNAFDIAANGLNIPSNQPDRACPVTAFVFASPRVGDSDFKKVLSGLKNLRVLRVRNALDIVPKVP--------FIGYKNVGEKLAIDTTKSEYLKKPGTLKSW------HNLEAYLHGVAGTQGSKGGFKLEVDRDIALVNKLVDALKDEY 364          
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Match: UPI0010A57566 (phospholipase A1-IIgamma-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A57566)

HSP 1 Score: 120 bits (300), Expect = 2.560e-25
Identity = 114/393 (29.01%), Postives = 171/393 (43.51%), Query Frame = 1
Query:  283 GANHWKGLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRGMSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSF---------GSFEDNWFGFMAVSTNEGK-----KEMVIVFRGTETDKEWIENANMFMEQLDGEPEESGLATIFNRSNL---MCHRGFQQLYREK--AEQF--VSPKDRIYEVLKD----YKEELDKVTVVGHSLGGAMAQTCAVDLAHSKFLGDT-------PILGIAWAAPKVGNSALSAWVAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISLRNEHLHKEGVVKGDDGNSPNHNLQQYLHCIDPT------------RDVALMNKVGNVIPDE 1329
            G NHW+GL+         D   +S+L+ YG      YD FI       ++A+   G S++        AK   F+ V  +     +Y+ +K Y    + +  P++F            E NW G++AV+T+EGK     +++VI +RGT    EWI   N F   L   P       +F    L     H+G+  +Y       QF   S +D++   ++     Y++E   +TVVGHSLGGA+A   AVD+  + +   T       P+    +A P+VG         +   LRVLRV   +D V   P      VF   Y  +G E+ + N+   K   +K     S  HNL+ YLH +  T            RD+AL NK  N + DE
Sbjct:   13 GKNHWEGLL------NPLDIDLRSYLIHYGQMTQATYDTFIS------EKASKFAGASKY--------AKKNLFARVGLENGNPFKYNVTK-YLYATSQIAVPEAFVVKPLPDDCWCKESNWIGYVAVATDEGKAVLGRRDIVIAWRGTIKTLEWI---NDFQFLLVPAP------IVFGGKGLGDPKVHQGWYSMYTSTHPKSQFNPTSARDQVLSEIRRLVDLYRDEEISITVVGHSLGGALATLNAVDITRNGYNKPTNAPERSCPVTAFLYACPRVGELIFKKAFTELKDLRVLRVENILDIVPKYP------VFP--YLEVGEELKMNNQ---KSPYLKSPGTISTWHNLECYLHGVAGTQGLNKEFKLEVNRDIALANKSDNSLKDE 364          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGE2_ECTSI7.010e-21572.55Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A6H5KDS9_9PHAE9.700e-20368.90Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
D7FQN1_ECTSI4.970e-15258.70Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A6A4P8C9_LUPAL7.910e-2829.19Phospholipase A1 n=2 Tax=Lupinus albus TaxID=3870 ... [more]
A0A2G3ANB7_CAPAN6.100e-2727.04Phospholipase A1 n=4 Tax=Capsicum TaxID=4071 RepID... [more]
UPI0002767B141.600e-2628.82phospholipase A1-II 1-like n=1 Tax=Solanum lycoper... [more]
A0A5N6QB05_9ROSI8.150e-2627.16Phospholipase A1 n=4 Tax=Carpinus fangiana TaxID=1... [more]
UPI001FB06DF01.140e-2526.57phospholipase A1-IIgamma-like n=1 Tax=Impatiens gl... [more]
A0A7J7I1Q6_CAMSI1.290e-2526.95Phospholipase A1 n=3 Tax=Camellia sinensis TaxID=4... [more]
UPI0010A575662.560e-2529.01phospholipase A1-IIgamma-like n=1 Tax=Prosopis alb... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:596177..606416 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score628.6
Seed ortholog evalue2e-177
Seed eggNOG ortholog2880.D8LGE2
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.phospholipase A1 activity
EggNOG OGsKOG4569@1,KOG4569@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons11
Model size2869
Cds size1251
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927434.803224-UTR-C-linearis_contig11:596176..5963261622927434.803224-UTR-C-linearis_contig11:596176..596326Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 596177..596326 +
1690879697.9581149-UTR-C-linearis_contig11:596176..5963261690879697.9581149-UTR-C-linearis_contig11:596176..596326Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 596177..596326 +
1622927434.9658885-UTR-C-linearis_contig11:604948..6064161622927434.9658885-UTR-C-linearis_contig11:604948..606416Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 604949..606416 +
1690879698.1040342-UTR-C-linearis_contig11:604948..6064161690879698.1040342-UTR-C-linearis_contig11:604948..606416Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 604949..606416 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927434.815991-CDS-C-linearis_contig11:596326..5964101622927434.815991-CDS-C-linearis_contig11:596326..596410Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 596327..596410 +
1690879697.970991-CDS-C-linearis_contig11:596326..5964101690879697.970991-CDS-C-linearis_contig11:596326..596410Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 596327..596410 +
1622927434.829723-CDS-C-linearis_contig11:598526..5986571622927434.829723-CDS-C-linearis_contig11:598526..598657Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 598527..598657 +
1690879697.9890816-CDS-C-linearis_contig11:598526..5986571690879697.9890816-CDS-C-linearis_contig11:598526..598657Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 598527..598657 +
1622927434.8509705-CDS-C-linearis_contig11:599481..5996221622927434.8509705-CDS-C-linearis_contig11:599481..599622Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 599482..599622 +
1690879698.0024924-CDS-C-linearis_contig11:599481..5996221690879698.0024924-CDS-C-linearis_contig11:599481..599622Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 599482..599622 +
1622927434.8652322-CDS-C-linearis_contig11:600293..6003541622927434.8652322-CDS-C-linearis_contig11:600293..600354Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 600294..600354 +
1690879698.01448-CDS-C-linearis_contig11:600293..6003541690879698.01448-CDS-C-linearis_contig11:600293..600354Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 600294..600354 +
1622927434.8759642-CDS-C-linearis_contig11:600845..6009411622927434.8759642-CDS-C-linearis_contig11:600845..600941Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 600846..600941 +
1690879698.025894-CDS-C-linearis_contig11:600845..6009411690879698.025894-CDS-C-linearis_contig11:600845..600941Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 600846..600941 +
1622927434.8861263-CDS-C-linearis_contig11:601652..6017751622927434.8861263-CDS-C-linearis_contig11:601652..601775Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 601653..601775 +
1690879698.0340893-CDS-C-linearis_contig11:601652..6017751690879698.0340893-CDS-C-linearis_contig11:601652..601775Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 601653..601775 +
1622927434.8966465-CDS-C-linearis_contig11:602239..6023871622927434.8966465-CDS-C-linearis_contig11:602239..602387Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 602240..602387 +
1690879698.0438375-CDS-C-linearis_contig11:602239..6023871690879698.0438375-CDS-C-linearis_contig11:602239..602387Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 602240..602387 +
1622927434.9074576-CDS-C-linearis_contig11:602824..6030041622927434.9074576-CDS-C-linearis_contig11:602824..603004Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 602825..603004 +
1690879698.0569322-CDS-C-linearis_contig11:602824..6030041690879698.0569322-CDS-C-linearis_contig11:602824..603004Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 602825..603004 +
1622927434.9204905-CDS-C-linearis_contig11:603436..6035471622927434.9204905-CDS-C-linearis_contig11:603436..603547Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 603437..603547 +
1690879698.0723255-CDS-C-linearis_contig11:603436..6035471690879698.0723255-CDS-C-linearis_contig11:603436..603547Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 603437..603547 +
1622927434.934709-CDS-C-linearis_contig11:604176..6042561622927434.934709-CDS-C-linearis_contig11:604176..604256Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 604177..604256 +
1690879698.085091-CDS-C-linearis_contig11:604176..6042561690879698.085091-CDS-C-linearis_contig11:604176..604256Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 604177..604256 +
1622927434.951235-CDS-C-linearis_contig11:604852..6049481622927434.951235-CDS-C-linearis_contig11:604852..604948Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 604853..604948 +
1690879698.0936522-CDS-C-linearis_contig11:604852..6049481690879698.0936522-CDS-C-linearis_contig11:604852..604948Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 604853..604948 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1185.1prot_C-linearis_contig11.1185.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 596327..604948 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1185.1

>prot_C-linearis_contig11.1185.1 ID=prot_C-linearis_contig11.1185.1|Name=mRNA_C-linearis_contig11.1185.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=417bp
MHTHILLGAGVALLLSVPGECFALFTKPAVKMADQMAMKLDEYRGANHWK
GLIPEAAESRTWDEGFKSFLLKYGMFNHIVYDVFIKNEDDFRDQATGLRG
MSRFGSDCDAFTAKGMEFSYVNSKGEKKQEYDFSKDYKIVGNLVCSPDSF
GSFEDNWFGFMAVSTNEGKKEMVIVFRGTETDKEWIENANMFMEQLDGEP
EESGLATIFNRSNLMCHRGFQQLYREKAEQFVSPKDRIYEVLKDYKEELD
KVTVVGHSLGGAMAQTCAVDLAHSKFLGDTPILGIAWAAPKVGNSALSAW
VAKQPTLRVLRVRIPIDSVANVPPDWLWTVFSGGYKHMGTEISLRNEHLH
KEGVVKGDDGNSPNHNLQQYLHCIDPTRDVALMNKVGNVIPDEYCRKHNI
SPQWHSQTYPRTIYHK*
back to top

mRNA from alignment at C-linearis_contig11:596177..606416+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1185.1 ID=mRNA_C-linearis_contig11.1185.1|Name=mRNA_C-linearis_contig11.1185.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10240bp|location=Sequence derived from alignment at C-linearis_contig11:596177..606416+ (Chordaria linearis ClinC8C monoicous)
TATATCTATGTGGTCTAATCTTTCAGAGCTGCGGACCTTACGGGACTGCC AACACTCGCGTTGAAAAGAACCAATATTAAAATACCAGAATAATACCGGT ATTACGCCCCTCGCCCCCTGTCGTGTGCGCACACAGAAAACCAACTCCCC ATGCACACGCACATCCTTCTTGGAGCAGGAGTCGCGTTGCTTCTTTCAGT CCCTGGGGAGTGCTTCGCGCTGTTCACGAAGCCGGTGAGAAAACGGGTAT GTTTGGGACAGACAGCAGTGAGACAACCCCTCTTGTTTTATGCCCATCAC CTCTTCTTGCCGCCTTTTTGCTCTTTCGCTTGTCGCTGCGCTGCGTTCGC GGGCAAGAGGTAGCGTTACAAACACCTGAGCTTAACCGAGGGGGAGGGAG GGAGGGAGGGAGGGCGAGAGACTGTTCTTGTTTGCGCACGCAACAAACAG CAGGAGGCGCTCCGCAGGTTGTAGGTTGCGTGATTCGGGAAAATACCTGG AAAATACGAGCACAAGTCAGGAGCTCTGTGCCAATCTTGATCTTTCACTC CAGAACAGCAGAGAGCAGCCGGCTGCCTCGTCCTCAAGCTCGCCCTTTCA TCGTCCGCCGCTGCGGTTATATCCACGCTCGACGTCGGAGAGTTATCTCG ACGCCCAAGCGGTATGAGTAGACAGAGAGGCAGAGAGAAAGGGCGAGGTG TGTTTCCCGTGCTTGTTTTCACGCTCGGACGATCTGTTTGTCGGACGATC TGTTGTAGGACGATCTGCGATCTCTCCGAGAACGACCTAATTTACTTGCC GATCGCCTACCCCGCTTTCTCCCTCCATGCGTGCTTGTGGAGAGGCAAAG TTGCACAGCACCACGTAACGGCGCCCGCCCGCCGCTCGCTATGAGTAGCT AGCTTTTCCCGCAATCTTACCTTCGCTACAAGAAGCAAGTCCAACCTACA AGTCCTAAAACCTCGTGTAGTGCTGTTTGTAGATCCTCGAAATTTCCGCT GTTGTTTTTGTTTTTCTCGGGCGTGTTTTGGTGAATTATCCCGCCTCCGC GCGTGGTCAATTTTCTCAACGACCTCTTACAACACGAGTGCTTGGTGTTG TTTTTTGCCGCGCGGCGGGATCTTGAACGCTTCTGTTGCGTGGCGGAGTT GGTGTTGGTGTGCCGAATGTCGGTCTTGTCCTCCTTCCTGTGTTTAGTTT GTAAATTTAAACCACTTTTGACGCAAAGTTGAACCGCTTGGAAGTTAGTT GCCGTTCGTTCGCCGCGTGCACCAAGACAGCGCGCAACGCAAGCGCAAGA AGAGCGTATGCATGTATGTACAAACACAAAGCAGCCATGTGTAACCGTAT CTATGATAATATGTAGAATCCACCTGCGGGGATTCTTTATTTTTAACTGC TGTGATTTGAGACATTTTTGCTGGATGTTGACTTAATTCCCAGCCAGCTA TTTACCCGATGAATTTTACCTTTGGAATTCTGATTGGCAGTCATTGAAAT GTACACACTGAAATGTAAAGGGGAGGTACACAGCAGCAGTACGGCACTCC GCCCTACTTTAACAGAAAATAAGAGACTGAAATCGGCCAATCCGGAAGTA CGAGCGATTTTACTCCAGCAACCTATTATAGTGCAATCGCTGGTTTGCGC CCCTCCTACTGCTGGAGTTCTACAGTCGGTATTTCGATATTCCCCCCGCA CCACATTCAAGGGTGCGCCGGCTGTATCCTACATGAAGTAGTGCGGATCT CGTCGCACCACTGAAAATCCTGGAACGGCAAAACTGCGGTGGCAAACTGG ACAGCTGCGGTGCAGGTCCGGTGCAAACTACCAGCCTTGATCTTGCGACC TTCAGTGGTTTCGGGCGTGCCTAACCGCGCCATCCGGGAAAGAAAACCTC TAATAGAACTGCCACATGTGATACTCGTACTCTGTGTGGTAGTAGTAGGT GTCTCCACATTTGTGCCTTCCTGGCTGTGCGTGCGCCCGTACAACAATAA TAGTGGAAGAAGTCACGTTTCCTGATGCCGCGCGCAGGTGGTGCTCGTGC GCGTGGTTCGAAACGACAGCGTGAAAACTTCCCTCTTCAACTTGGCGGGG CGTTTCTCGTCGCTTATCATCGAAGCAGCGGGGCAGTGGTGCGCCCAGAC GACCACAAAAACACGCGCCCCGGTCTGCCCCACCGCCAACAGCAGTAGAC GCACCAGCCAAACCACCAGGCAGAAAGGTTAAACTCTGCCTGCCCCCAAT GATCCTACAACTCATATACCAATTATTTTGTACATTATTTTCGTGTTTTT TTTGTTCCGGGTGGCGTCGGTCTGCTGTGTTGATGCGCTGTCTCAAAAAG GCGGTCAAGATGGCGGACCAGATGGCGATGAAGTTGGACGAGTACCGCGG GGCGAACCACTGGAAGGGGCTCATCCCCGAGGCGGCGGAGTCGAGGACGT GGGACGAGGGCTTCAAGTCCTTCCTGCTCAAGTAAGTCATGGCTGGATAG AGATAAATAGTGCCCGAAAAGGCTGCGGCAAGGGCCGTTCTATTGCACAC GCGAGCGTTTTCCCTTCCAAATTTCCAATGTTTTTTTAGGGTTAGCCCGA AGGCGCGGAAGCACATTTGTACATGCGAGTTTCGGATTCCACACATTTGT AGGATGTAGGATACATTCGGAAAACCTGGAGAGAAGGAAATACCTCGGGC TCGAGCATTTGAAGCCGCTCACGTTTTTATTATATTTTTTTATGTAAAGA CAACAACAAAAACAACAATAACAACAACAACAACAACAACAACAACAACA ACAACAACAACAACAACAACAACAACAACAACAACACGTTTGTTTGAAAT TTGAAATTTGGGCAATCGGGAGCTTGGGGACTCGGGGAATTTGAAAGGGA AAACCCTCGCGTTTGCAACGGCCCCACGGCTCACGTTGCTTTCGTCTGCG TGGTGGGCGGGCTTGTTCGCCCACCAGGTGCGCGTTGCTGCACGTTGCTG CGCGTTGCTGCGCGTTGCTGCGCGCCCGGGTTGCAGCGGATTGGACAACC ACATTTTTCGCTCTGCAGTTCGTCGGCTGCTGCTGTGGTCAACGCGCCCC GCCCCCCCTGCCTTTCCCTCAGTTCATGGCCTGGTGCTCGAGAGTGCCCC CCCTTTTCAGGTTTTTACCCCTTTTCTGCTTCGTGCGTATATAGCTGCTT CCGCAAAAAACATTTCCACCTCGCGCCCCATCTGTTCCGTGATTTTCACA TGCCCTCCCTTCCCTTTTTTTTTTTTTTTCGTCACCGGAACAACACGTAC ATTAGGTACGGCATGTTCAACCACATTGTGTACGACGTGTTCATCAAGAA CGAGGACGACTTCAGGGACCAGGCAACAGGGCTGCGCGGCATGTCCCGCT TCGGAAGTGATTGCGACGCATTCACCGCAAAGGGCATGGAGTTCAGGTAC TACTGCTACTGCTGTACGCACTACTGCTGCTGTACTCTGCACCGCCCGTT TTTCTCTGTTCGCAGCAGCAGCAGCAGCCGCAGCAGCAGCAGCAGCAGCA GCTGACAGTTGTCATGCATAGATATTTAGCGGTGCTTTTTTCAACCCCCT TCAAGGAACACCCGCAGGGGTGTTGCTTAAATTTAGCAAAAAAAGTTGGT CGCGAATCAATACGTTGGGTAAACGCGAAAGATCTTGCTGACCTCTGGCG GTCACCCGGAAAAGGCCAAGTGGAGGGGTAGGTGGGTTTCCACAGCAGTG GGCGTAGCAACGTGCGTTTTCTAGCGCGGAAGCGGTAGCTTCGCCTGTTT CTCAGCCCTACGATCTATGTGGGCCTATCGCCGCTACCCCACAGCTTTGT TTTTCATCGCCATCTACCCCTGCTGAGAGCCGCGCCATCTACCCCTGCTG AGAGCCGAGCATCGTCGCACCGTCTCCTCTCTGGCCTTTGGGTATTTTAC TTTTGGGTACGTGTGTGACAAAGGGCGGGTGCCTCTCTCATGCAAATACT CCGGTTGGCCATCTCGTTGCCAACTCTCATTGTGTCTCTCCCCGTCCTCG ACTCCTTGTCCGCTTCGTGCCGCTTTCGTCGCTGCGCCGATCTGCTTTGT GACGCATGGGTTCACAGCTACGTAAACTCCAAGGGAGAGAAGAAGCAGGA ATACGATTTCTCCAAGGACTACAAAATCGTGAGTGCGAAACACTTGTTGC GAGAGAGATGGAGAGAGGGGGAGAACGAGAGAGAGCGAAGCTTGTGACAC CGGATATTGAGCCTCACACTTGTCTAGCATTGCCCGAATGCCTAACGTTC CTCTCTGAGTGTCCGACGTGTTGCCGTCTACGTAGACCCGTCTACCTCTC CTCTACAGCATTTCTCCGTCATTTTCTGCGATTCCAATGCTCTGTTGCTG AGGTGCGATTCGCTCAGGGCACAGGGCCAAGCAAGAGTACATTTACGCCA ACTGCCAAGATGCAACGGCAGCAGCGGGTTGAACGTACAATATGTATCGG ATGCTGCATGCAAGCACCCCCCATCCCTTTCTTGCCGCGTCCTGTGCCGT GTTCTCGTGTTCACGCCCTCCCGCCCGCCCGCCCTTGTTAGGTGGGCAAC CTCTGACCTTGTGTGATGTAGTATAACACTCCCCATCCCTTTCTTCCCCG TGCTGTGTGCTCGCGTCAGGTGGGTAACCTTGTGTGCAGCCCAGACTCGT TTGGCTCGTTCGAGGACAACTGGTTCGGCTTCATGGCCGTCTCCACAAAC GAGGGCAAGAAAGAGGTACGTCTGAACCGTACGCTGCTGTGTATATCTAC GGTGCCTCAAGGTGCCAGATACCCACTCCTGCTGTGGTGCGGTGCCCTCC ACAAGTTTTGACCCGATGTTTCGAATCGCGCTCGGGTGGTCCCAATTTGT TTTTTTCGTGGATGCCACCGATTTGAACCGACACATACCAAGTAGCTTTG CTGGCGAATCATGATGTTTGTTTTTGGTTATTGTGCATATACCTTGACTT ACCGGTTGACCCTCATTCCCCTTCACCTCACCACAATGGCGTGAAAGCAA AGAGATGGTTTCTTGATGGTTTACGCAGCAGGTATTGTTGAGGCCGGGTA GAGGCCATCGTCACTGCTGCTGTAGTTTTGAAAAACATGCCGCCGTTTTC TTCGTTGTTTTCTTGATCTGTTGCTCTGCCGGCGTGGACAGCAGCAGTAT TGGGGTTGTTTGGCGGTTACTCGGTGTGTGCCTTGTCGCGTTCCGCGTGC TAGCCTCATGCTGCTTTCGAAACTGCTACACTGCGGTCAGATGGAGATCG TATTCCGCGTGCTAACCGCACGCTGCTCTTGAAATTAATCTACGCCCAGA TGGTGATCGTGTTCCGCGTGCTAACCTCAAACTGCTTTTGAAACTACTAC GCTGCGGTCAGATGTTGTCCGTATTCCGCGTGCTAAACTCATACCACTGC TTTTGAAACTATTACGCTGCGGTCAGATGGTGATCGTGTTCCGCGGGACA GAGACGGACAAGGAGTGGATCGAGAACGCTAACATGTTCATGGAGCAGCT GGACGGCGAGCCCGAAGAGTCCGGCCTTGCCACCATCTTCAACCGCTCGG TAAACGCTTCGAGATTTTTCTCTTTGAGGGGAGGTTCTTTCTTTGATGCT GTATTGGAATAACAGAGTAACTGTTGCTGCTGATGCTGCTGATACTACTG ATGCTGCTGATGCTGCTGATGCTGCTGCTGCTGTTATCTTCATTGTCATT GTCATTGTCATTGTCGTTGTCGTTGTTTGCTGCAGGCTTAACGCCGTTGT TGCCCAAAACGCTGGCTAGACCAGCAAGATGGGAGTAAGCAACATTCTGT CTGTCTGTCGTCGTCTTCGTTATCGTCGTAGCAGTTGCTGTTGCTGCTGC TTCTTCTTCTGCTGCCGCCCTTCTTTTCCCTCTGAGCTTGCCTTCACCTT CAGGCTTTTCTTGCTCGCTTCCTGAATTTGTGTCCATACCCGTATTCGTC CCGAGACTTGACTTGAAAACGAACCCGTTTTTCGCGCGTGTGTTTGGTGG ATCCGCGCGGCAGAATCTCATGTGCCACAGGGGTTTTCAGCAGCTCTACA GGGAGAAGGCGGAGCAATTCGTCTCCCCTAAGGACAGAATCTACGAAGTC CTCAAAGACTACAAGGAGGAGCTGGACAAGGTCACCGTTGTCGGACACAG CCTGGGCGGAGGTAAGCGCGCTTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTTTTATTGTTGGTGGTGGTTGGGGTGGTATAT AATGTTGTTGCATTTAACGTAAATTTTGTTTGTGTTTGGTGCTATGGTCC TGAAATCCACTTCAACCCGAAGTAACTCCGCCATCAGGCACGGCCGCCAC ACTGTCAGGGGGTAGCCGGCGGCCCCGTTAGGCCAAAAAAGTCAAAGGGA TAAGGTCGGAGCCATAAGGTCCCGTTCAAACGTTCAAACACCAGCGCGCG CGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCCGCGTTAAAGTA GCTCTCATTCACAGGATCCATTGGTCGATGGGGCACATCCACATGCTCTC ACCGTCAATCATTTATCCCCCCCCCCCTCGATTGCATTTTGGAAACAGCC ATGGCTCAAACCTGCGCCGTCGACCTCGCGCATTCCAAGTTCCTGGGGGA CACCCCGATCCTTGGCATAGCGTGGGCAGCCCCTAAGGTCGGAAACAGCG CTCTGTCGGCCTGGGTGGCGAAGCAGCCCACCCTGCGCGTCTTGCGAGTA CGGATCCCCATCGACAGCGTCGCCAACGGTGAGCGCGGCAGCTACATAGA TTTTCGCATACCGTAAAGCTGTAAAAATTGTTCGTCACGGTGCCGCCTCC CTGCCTCCCTCCCAGAGAGAGTTAGGGTCTCGAGGAATCGAGGATCGCAA TAATACTGGCTACAGCGGGTTCGGAACAAAGAATTTACTTCTGTGATTTG TTTTTTCGATGGAACAAAAACGTTTGTCTCTCCTCGTTTGTTATAGATCC CGCAACAACTCTCCTGGTGTGGATTGTATCTGGATCTTCGCGGCCGTCTG CCACTATCGACGCTGCTGTGTTCAGGAGCGCACAACCCTTACTCAAAAAT AGCTCCAAAACGCACGGTGGTTGCACGGGTCGACGGAGAGTCAAGCGGCC AAAAATAGGTTCAAGGAAGTACGTACCCGAAGCAACCCCCGTCTTTCTGC TCCCTAACAGTGCCGCCCGACTGGCTGTGGACCGTCTTTTCTGGGGGCTA CAAGCACATGGGCACGGAGATTTCTTTGCGTAATGAGCACCTGCACAAGG AGGGCGTCGTCAAGGGCGACGGTGGGTACCAAACGATACATCTGAAACAA GAAGCACCAACTTCTTCGTGTGCCTCGGTTGGTGTGTAGGTCGGCTTCGA GGTAATTTAGCGAGGTAATGAACCGCACGCCATATCCCCATGCTGGTACA CACGGAAGGAAGTGGCAGAACGGACCTTGACACGCGAGGGCATACTCGGG CGTGCTCGCCCAAGAACAGGCAATCAAAGTAGATCCTCGGTGTCCTTCGT AACGCGTGTTGTTGAGCCTCATCACCTGATAAACAAACGTGTTTGAGGAG TTCCTCAAACACTTCCATTTAGCCAACAAATCCACCCATTTAACCCTAGG TATTATGTAGGCCAGCTTTATGGAACTCCCCAAATACGGCGAAGTAAGAT CCACGACGGGCAAAACCGGAAGTGGTCGTTCTGTTCGCGAACCTTGGTTG ACCCACCGCACGATCGACCTTCGCCCTTGTTGGCACGAAAAAAAACAAAA ACGTTTTGTTTTGTATATTTGTACTTCAAGTATATTTGTATTTTTGTTTT ATTTTTGTTTTGGCGTTTTACTTCATGTTTTTTTTCTTTCTAATATTTGC CCTATTTGTGCATGTATGGTGTGTTTATTATGTGGTTTACGCGAGCGCAG ACGGAAACAGCCCGAACCACAACCTGCAGCAGTACCTCCACTGCATCGAC CCGACCAGGGACGTCGCGCTCATGAACAAGGTGAGGCGGTTGGGCGTGAC GAAACCAAGAGAAGCAGTAGGCGATGCCTCGTTGATTCTTCGAAGATCAG CATGTAGAGGACGCACGCGGGTTGATTGGAAATGCCGGGGGGGTGCTGGC TGCTTTCGTGCCCTTTGAGGCGGAGCGGCGAGCGGTGAGCGGCAGCGCCG GCGGCTCGCTGGTGTTGGCGCGGAGAGGCTGATGGTGTTGCATGAAATCG TTTTCGTAGATATTGAGGAGGACGTTTTGATACCGAGAAAGTCTGCTTGT TATCGGACAAGGGCAGGGGCTGACTACGGTGTGGTTGGAACCTGTGGCGA AGACATTCCTTGTAGCTTTAGCTTTCAATGTGGACGCGACACAATGCGAT CGTTGGGCAACGAATTGCGTATTTTAGTGTACATAACGGGACGAGAGGAG GTTACATGACCGTCTTCGTGCTCCCATCCACCCGCGGCTTTCCTCCTACG GTTTTCCCTCCGACAGATAGACAGCAGTAGTGCGCTCGGCCCTCCCTCAT TCGCGTCACCCCCGCTTCCCTGTTTCCCGCCCCCCTGCCTCCATTTCGTG GGTGCCTTTGCTTCGATTCGGAGCAGGTCGGAAACGTCATCCCGGACGAG TACTGCCGCAAACATAACATCTCTCCCCAGTGGCACAGCCAGACGTACCC GCGCACCATCTACCACAAGTAAAGCACCCCCACCAGACCTGCCAGAGATC CTTTCGAGGTTCGCCCTCCATCTAGGCCCTCGGACAAAAGCTCCCCTGAT GGAGGGGAAGGAAAGCCGCGGAAGAACCGTGGGAGAAAAACGAAGGCTGT ACATTAAAACGGGGTGGATGGGCGAGAAGAGCTCGCCGTGGTCTGCAAAA GCCCCCCGGGGTTGTTCTTTAGATGAGACGCCCAAGATTGGAGAACCGTC GGTTGCAGAAAAGAAAGACGAAGAGAAACGTTGAGTATAGCCCAACACCT CGCGTGGCTGTGCCATGCCGCCGGCTTTGGGCAACCCGGCACACGGCAGA TGCGCGCGTTCCAGTAGGTAATACTCGCCGGCAAGGCTAGCCTACTCCTG CCGGGTTGCGAAATGGGCGATTCGCCGCCATCACTTCAGGAGAGAAGAGT CGCTTCTTTTTTCTTTCGATTTGTTTCTTTTTGGCCTCGACGTTCGTTGC GTTCGGCTTTTTATTAGTGTACATTTATGGAAGGATCTTACCACAGAGGT ATTGTCTTGTTGTTGCAGTTGTCTTTGGATCTGCCTGCTTGTGCGTATGC AGGTACGGAAGCATCGTGTTTGGTTTCGAATCGATGGCTTCCGAGGCATC ATAGTGCGGGTGTCGAGTGAGGGAGTGCCATTTGGCCTTTCTTTGGCTAT GTTTACGTGATAAACGTGCCGTTTGTAGACGAGCTGATACCAGCGAAACC TCCAGCGTTGCCACGCGCCGACACGAACGTGTCTGCAACCAACGGTGTGT GATATGTAGGAAGGACGGGAGCACGGGAGCACGGGGTGCTTTTTTTGCAA GAAGGGAAGAAAATAGATCGCGGGGTATGCGGTGTATGCTGTTGAGGCAC TGTCATCGAGAGTTTCGCTTCCTGGCCGATGCTGTACTGGGCGCCATGTA CCTGTAGTACCACGTGGTACTGTGTAGAGGAATACACGGAGACGAAGAGG CATTTCCGCAAGGACGGGCGGCGACGGCGAAAAAAACCAGCCGAACGAAC CGGCAGTACGGTCGCCCACTGCTCGGCTCTCTGTCTGAGTTGATTTACAG AAAGGGACAAGAAGAGAGGGGTGGTGTTCGGGAGGGATCGAAACGCACGG TTGCGATCACGGGATCGAGAGATCGAAATTTCGCGAGCTCATAATGTAGT GACCGCAATATCCCGCTAATTTAGTGTGGAGCGCCGCCGGACGGTTATTT TTTTTTTACCCTCCTCTGGTGTCCTCTGGTGCGGCGTCGAGAACAGTAGT AGTAGTAGTAGTATTGTGCTGGTATTGTGGGGTGACCCGTGTCTTGTTCA ATTACTACGTAAACCCACGATATCCATTCCTAAAAAGTGCCCCGATTGAC CACCAAGAATATTGTGCTTGCATCATTTCGCATCACCTGCCATTGTACAT GAAGACTGAGACGCGGCGAGTAATACGATTTACTAGAAAA
back to top

Coding sequence (CDS) from alignment at C-linearis_contig11:596177..606416+

>mRNA_C-linearis_contig11.1185.1 ID=mRNA_C-linearis_contig11.1185.1|Name=mRNA_C-linearis_contig11.1185.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2502bp|location=Sequence derived from alignment at C-linearis_contig11:596177..606416+ (Chordaria linearis ClinC8C monoicous)
ATGCACACGCACATCCTTCTTGGAGCAGGAGTCGCGTTGCTTCTTTCAGT
CCCTGGGGAGTGCTTCGCGCTGTTCACGAAGCCGATGCACACGCACATCC
TTCTTGGAGCAGGAGTCGCGTTGCTTCTTTCAGTCCCTGGGGAGTGCTTC
GCGCTGTTCACGAAGCCGGCGGTCAAGATGGCGGACCAGATGGCGATGAA
GTTGGACGAGTACCGCGGGGCGAACCACTGGAAGGGGCTCATCCCCGAGG
CGGCGGAGTCGAGGACGTGGGACGAGGGCTTCAAGTCCTTCCTGCTCAAG
CGGTCAAGATGGCGGACCAGATGGCGATGAAGTTGGACGAGTACCGCGGG
GCGAACCACTGGAAGGGGCTCATCCCCGAGGCGGCGGAGTCGAGGACGTG
GGACGAGGGCTTCAAGTCCTTCCTGCTCAAGTACGGCATGTTCAACCACA
TTGTGTACGACGTGTTCATCAAGAACGAGGACGACTTCAGGGACCAGGCA
ACAGGGCTGCGCGGCATGTCCCGCTTCGGAAGTGATTGCGACGCATTCAC
CGCAAAGGGCATGGAGTTCAGGTACGGCATGTTCAACCACATTGTGTACG
ACGTGTTCATCAAGAACGAGGACGACTTCAGGGACCAGGCAACAGGGCTG
CGCGGCATGTCCCGCTTCGGAAGTGATTGCGACGCATTCACCGCAAAGGG
CATGGAGTTCAGCTACGTAAACTCCAAGGGAGAGAAGAAGCAGGAATACG
ATTTCTCCAAGGACTACAAAATCCTACGTAAACTCCAAGGGAGAGAAGAA
GCAGGAATACGATTTCTCCAAGGACTACAAAATCGTGGGTAACCTTGTGT
GCAGCCCAGACTCGTTTGGCTCGTTCGAGGACAACTGGTTCGGCTTCATG
GCCGTCTCCACAAACGAGGGCAAGAAAGAGGTGGGTAACCTTGTGTGCAG
CCCAGACTCGTTTGGCTCGTTCGAGGACAACTGGTTCGGCTTCATGGCCG
TCTCCACAAACGAGGGCAAGAAAGAGATGGTGATCGTGTTCCGCGGGACA
GAGACGGACAAGGAGTGGATCGAGAACGCTAACATGTTCATGGAGCAGCT
GGACGGCGAGCCCGAAGAGTCCGGCCTTGCCACCATCTTCAACCGCTCGA
TGGTGATCGTGTTCCGCGGGACAGAGACGGACAAGGAGTGGATCGAGAAC
GCTAACATGTTCATGGAGCAGCTGGACGGCGAGCCCGAAGAGTCCGGCCT
TGCCACCATCTTCAACCGCTCGAATCTCATGTGCCACAGGGGTTTTCAGC
AGCTCTACAGGGAGAAGGCGGAGCAATTCGTCTCCCCTAAGGACAGAATC
TACGAAGTCCTCAAAGACTACAAGGAGGAGCTGGACAAGGTCACCGTTGT
CGGACACAGCCTGGGCGGAGAATCTCATGTGCCACAGGGGTTTTCAGCAG
CTCTACAGGGAGAAGGCGGAGCAATTCGTCTCCCCTAAGGACAGAATCTA
CGAAGTCCTCAAAGACTACAAGGAGGAGCTGGACAAGGTCACCGTTGTCG
GACACAGCCTGGGCGGAGCCATGGCTCAAACCTGCGCCGTCGACCTCGCG
CATTCCAAGTTCCTGGGGGACACCCCGATCCTTGGCATAGCGTGGGCAGC
CCCTAAGGTCGGAAACAGCGCTCTGTCGGCCTGGGTGGCGAAGCAGCCCA
CCCTGCGCGTCTTGCGAGTACGGATCCCCATCGACAGCGTCGCCAACGCC
ATGGCTCAAACCTGCGCCGTCGACCTCGCGCATTCCAAGTTCCTGGGGGA
CACCCCGATCCTTGGCATAGCGTGGGCAGCCCCTAAGGTCGGAAACAGCG
CTCTGTCGGCCTGGGTGGCGAAGCAGCCCACCCTGCGCGTCTTGCGAGTA
CGGATCCCCATCGACAGCGTCGCCAACGTGCCGCCCGACTGGCTGTGGAC
CGTCTTTTCTGGGGGCTACAAGCACATGGGCACGGAGATTTCTTTGCGTA
ATGAGCACCTGCACAAGGAGGGCGTCGTCAAGGGCGACGTGCCGCCCGAC
TGGCTGTGGACCGTCTTTTCTGGGGGCTACAAGCACATGGGCACGGAGAT
TTCTTTGCGTAATGAGCACCTGCACAAGGAGGGCGTCGTCAAGGGCGACG
ACGGAAACAGCCCGAACCACAACCTGCAGCAGTACCTCCACTGCATCGAC
CCGACCAGGGACGTCGCGCTCATGAACAAGACGGAAACAGCCCGAACCAC
AACCTGCAGCAGTACCTCCACTGCATCGACCCGACCAGGGACGTCGCGCT
CATGAACAAGGTCGGAAACGTCATCCCGGACGAGTACTGCCGCAAACATA
ACATCTCTCCCCAGTGGCACAGCCAGACGTACCCGCGCACCATCTACCAC
AAGTAAGTCGGAAACGTCATCCCGGACGAGTACTGCCGCAAACATAACAT
CTCTCCCCAGTGGCACAGCCAGACGTACCCGCGCACCATCTACCACAAGT
AA
back to top