mRNA_C-linearis_contig104.918.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig104.918.1
Unique NamemRNA_C-linearis_contig104.918.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: D8LEA0_ECTSI (Thioredoxin-like_fold domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA0_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 1.490e-89
Identity = 152/234 (64.96%), Postives = 176/234 (75.21%), Query Frame = 3 
Query:  129 AKHKMPRPCRRGRNRALCAAAVLLGLLFFTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYS--DSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 824
            A   M    RR   R L   A+L GL   TILAAV VQSEP IPFD YGHV+  QG+ +A  KVEVYLDLACSDCAL WPV+ +VAEAYG + EFLYRLFPLPYH NAF AAKAAK + LYS    D  +ASFFT VF GQD ISND+TE +TQP+IE IL  WATS++G+S   F+ GM+D E +  TR QFKYGCLHGV GTPQV+IGG+LA GLDG+ATFQDWQD+L+PL+
Sbjct:   11 AHRNMAAASRRLSFRTLLGVALLFGLTL-TILAAVAVQSEPAIPFDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLL 243
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A815YPJ9_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A815YPJ9_9BILA)

HSP 1 Score: 129 bits (325), Expect = 8.600e-30
Identity = 73/210 (34.76%), Postives = 118/210 (56.19%), Query Frame = 3 
Query:  204 LLFFTILAAVTVQSEPDIPF--DRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSD-NEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 824
            +L FT+L    + ++  IP   D YG      G  DA   +E++LD  C DC  +WP + QV +AYG +  F +  FPLPYH N+F A++   V+S  ++ + + I ++ T VF+ Q+   NDAT+++T P++   LA +      V++  F  GM++D+ +  TR  +KY C  GV GTP   I GV A   D   +  DW+ +++P++
Sbjct:    4 ILIFTLLVGF-ISAQAPIPTRPDGYG----VGGPADAHVVIEMFLDPLCPDCKASWPTVLQVIQAYGTKIHFRFHTFPLPYHTNSFVASQGVHVISNVTNRNLDSIFTYVTKVFENQETWYNDATKNMTMPQVVDSLAAFVAQLGLVTKAQFLAGMANDDINFETRVSWKYACSRGVVGTPTFLINGV-ATSADDSWSLADWKSVIDPIL 207
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A194ANN1_PINFU (Thioredoxin-like_fold domain-containing protein n=1 Tax=Pinctada fucata TaxID=50426 RepID=A0A194ANN1_PINFU)

HSP 1 Score: 117 bits (294), Expect = 9.600e-26
Identity = 76/215 (35.35%), Postives = 112/215 (52.09%), Query Frame = 3 
Query:  192 VLLGLLFFTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKV--EVYLDLACSDCALTWPVLTQVAEAYG-HQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLVG 827
            +LL +L  +  A V +  +P         + FT G+ DA A++  E ++   C D    +  L  VA  YG  +    Y LFPLPYHRNAF AAKA ++V  +++S NE   F   ++   D  SNDAT  +++ E+   LAD+ +    VS K F   MS D  +  TR ++KY C  G  GTP   +  VL    D + T  +W+ +L+PL+G
Sbjct:    5 LLLNVLVLSAFAQVPIPKQP---------LGFTYGNGDASAQIQLEAFMGPLCPDSKECFATLQNVASFYGPSRLRLRYHLFPLPYHRNAFIAAKATRIVDRFTNS-NETIDFMGTIYTNIDSFSNDATHGMSEAEVIQKLADYGSKMAKVSMKEFVDMMSSDTIEGDTRTEWKYTCSRGFSGTPTFTVNDVLVAA-DPKWTVSEWRQVLDPLLG 208
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A5A7Q744_STRAF (Thioredoxin superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7Q744_STRAF)

HSP 1 Score: 111 bits (278), Expect = 4.390e-24
Identity = 57/169 (33.73%), Postives = 94/169 (55.62%), Query Frame = 3 
Query:  318 VEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 824
            +E + D  C D   +WP L +V + YG + + + RLFPLPYH NAF A++A  +V+    + +       A F+ Q+  S ++T +L++  +   +  +++ A G S+ A  +G  +DE D LTR  FK G + GV+GTPQ F+ G +         +  W+ +L+PLV
Sbjct:   42 IEAFFDPVCPDSRNSWPPLKEVLKYYGDRVKLITRLFPLPYHANAFVASRAITIVNDVVSTSSAYL-LLEAFFNNQETFSGNSTFNLSRAVVTDRIVKFSSKAVGHSQSAIQSGFQNDETDYLTRVGFKQGGIRGVYGTPQFFVNGFIFAEPGSAQNYSTWRAVLDPLV 209
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A2R6WDY7_MARPO (Thioredoxin-like_fold domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WDY7_MARPO)

HSP 1 Score: 111 bits (277), Expect = 9.460e-24
Identity = 67/208 (32.21%), Postives = 98/208 (47.12%), Query Frame = 3 
Query:  204 LLFFTILAAVTVQSEPDIPFDRY--GHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPL 821
            L+F  +L +++V     IP   +  G  +  +  P+ V  +E ++D  C DC + WP +T+V   YG    F+   FP+P+H NAF AA+A  + S  + S          +F  QD   NDAT D T   + +   D A    G+    F  G +D   D  TR  FKYGC   V  TP   + G+     D   + +DW  LL+PL
Sbjct:   11 LVFCLVLCSISVSLVAAIPIPAHYDGFGIPPRSIPEPVL-LEAFIDPICIDCKIAWPTVTKVLSIYGSSLSFIVHPFPVPFHHNAFFAARALHIASSLNSSST--FPLLELIFKKQDSFLNDATNDETPASVVSRFVDLAAEV-GLPADEFAAGFTDSNTDQATRISFKYGCARYVTSTPSFLLNGIYVSA-DETWSVEDWAKLLDPL 213
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: W4FQ48_9STRA (Thioredoxin-like_fold domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQ48_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.300e-23
Identity = 74/237 (31.22%), Postives = 118/237 (49.79%), Query Frame = 3 
Query:  195 LLGLLF----FTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAY-GHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSA-----TGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLVGGPAARLKLNGTHNSVV 875
            ++GLLF    F +LA +   S  DIP    G   +  G P A  +++V++DL C      +P L Q+ +A+ G      +++ PLP+HRNAF AA++   V ++S        +   ++  QD++SN  T + T  ++   LA WA +A          K    G ++DE    TR  F+Y   HGV GTP  ++ GV     D   +F DW +++ PLV    A + L  T+N+ +
Sbjct:    1 MMGLLFRAAIFVVLAMLPSSSVGDIPTTTPGFT-YKDGLPQAPVQLQVFIDLLCPYSKAAYPALKQLGDAFEGKDFRLTFQVLPLPFHRNAFLAAQSTVSV-VHSVGVQSFVPWLETIYANQDKLSNTNTLNTTPNDLITQLASWAHAAFPSIDVASFRKTLLPGTAEDEK---TRQLFRYTLAHGVAGTPMYYLNGVHYNNADSAWSFNDWFNVINPLVQANKAAVPLPSTYNNPI 232
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: W4FS09_9STRA (Thioredoxin-like_fold domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FS09_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.550e-21
Identity = 72/229 (31.44%), Postives = 113/229 (49.34%), Query Frame = 3 
Query:  195 LLGLLF----FTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAY-GHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSA-----TGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLVGGPAARLKL 851
            ++GLLF    F +LA +   S  DIP    G   +  G P A  +++V++DL C      +P L Q+ +A+ G      +++ PLP+HRNAF AA++   V ++S        +   ++  QD++SN  T + T  ++   LA WA +A          K    G ++DE    TR  F+Y   HGV GTP  ++ GV     D   +F DW +++ PLV    A + L
Sbjct:    1 MMGLLFRAAIFVVLAMLPSSSVGDIPTTTPGFT-YKDGLPQAPVQLQVFIDLLCPYSKAAYPALKQLGDAFEGKDFRLTFQVLPLPFHRNAFLAAQSTVSV-VHSVGVQSFVPWLETIYANQDKLSNTNTLNTTPNDLITQLASWAHAAFPSIDVASFRKTLLPGTAEDEK---TRQLFRYTLAHGVAGTPMYYLNGVHYNNADSAWSFNDWFNVINPLVQANKAAVPL 224
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A176WPY7_MARPO (Thioredoxin-like_fold domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WPY7_MARPO)

HSP 1 Score: 107 bits (268), Expect = 4.170e-20
Identity = 65/203 (32.02%), Postives = 96/203 (47.29%), Query Frame = 3 
Query:  213 FTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPL 821
            F +L A+ + +     +D +G  +  +  P+ V  +E ++D  C DC + WP +T+V   YG    F+   FP+P+H NAF AA+A  + S  + S          +F  QD   NDAT D T   + +   D A    G+    F  G +D   D  TR  FKYGC   V  TP   + G+     D   + +DW  LL+PL
Sbjct:  609 FLVLRAIPIPAH----YDGFG--IPPRSIPEPVL-LEAFIDPICIDCKIAWPTVTKVLSIYGSSLSFIVHPFPVPFHHNAFFAARALHIASSLNSSST--FPLLELIFKKQDSFLNDATNDETPASVVSRFVDLAAEV-GLPADEFAAGFTDSNTDQATRISFKYGCARYVTSTPSFLLNGIYVSA-DETWSVEDWAKLLDPL 800
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A7S3H9Z6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9Z6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.420e-19
Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:  417 YRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEA-----DTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 824
            YR+FPLPYH+ AF  +KAA++V    + +  + +FF   +  QD I N  T D T  ++  ++  WA   TGV+E+ +  GM+   +     +  TR+ +K  C+ GVF TP   I G+  GGLD   TF+DWQ  L+PLV
Sbjct:    2 YRVFPLPYHQQAFIVSKAAQLVQQLGNPE-AVFTFFDTAYANQDLIYNANTLDKTYNDVVKLVEPWAVQGTGVTEENYFIGMNSSTSVGNPIEMETRYMWKQVCIEGVFATPLFQIDGLKVGGLD---TFEDWQATLDPLV 138
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BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: UPI00145888FB (uncharacterized protein LOC117332932 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145888FB)

HSP 1 Score: 99.0 bits (245), Expect = 3.010e-19
Identity = 68/209 (32.54%), Postives = 105/209 (50.24%), Query Frame = 3 
Query:  213 FTILAAV-TVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYG-HQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATF--QDWQDLLEPLVG 827
            F + A +  V  +  IP    G   +  G+  A  ++  +L   C D    +P L +VA+ YG  +   +  LFPLPYHRNAF AAK A++ ++ S S N   S+ TAV+      SND T D T+ +++ + A  A +   + +  FNT   D   +  TR  +KY    GV  TP   I  VL   +  E T+  +DW+ +++ L+G
Sbjct:    7 FVVFALIGAVYGQIPIPSKPLGFS-YGLGNKSAPIQLSTFLGPLCPDSQNAFPTLLKVADYYGPDRVRLITHLFPLPYHRNAFLAAKGAQITNVLS-SGNSTYSWMTAVYSNLAAFSNDVTHDKTEKQVQDMFASMAKTL-NLDQTKFNTMYKDSGIEEATRLDWKYTATRGVAWTPAFMINDVL---IQAEPTWTLEDWKKVIDSLLG 209
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA0_ECTSI1.490e-8964.96Thioredoxin-like_fold domain-containing protein n=... [more]
A0A815YPJ9_9BILA8.600e-3034.76Hypothetical protein n=4 Tax=Rotaria TaxID=231623 ... [more]
A0A194ANN1_PINFU9.600e-2635.35Thioredoxin-like_fold domain-containing protein n=... [more]
A0A5A7Q744_STRAF4.390e-2433.73Thioredoxin superfamily protein n=1 Tax=Striga asi... [more]
A0A2R6WDY7_MARPO9.460e-2432.21Thioredoxin-like_fold domain-containing protein n=... [more]
W4FQ48_9STRA2.300e-2331.22Thioredoxin-like_fold domain-containing protein n=... [more]
W4FS09_9STRA2.550e-2131.44Thioredoxin-like_fold domain-containing protein n=... [more]
A0A176WPY7_MARPO4.170e-2032.02Thioredoxin-like_fold domain-containing protein n=... [more]
A0A7S3H9Z6_9STRA1.420e-1939.01Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI00145888FB3.010e-1932.54uncharacterized protein LOC117332932 n=1 Tax=Pecte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:504258..510959 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.9
Seed ortholog evalue2.2e-78
Seed eggNOG ortholog2880.D8LEA0
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.tRNA 5'-leader removal
EggNOG OGsKOG2567@1,KOG2567@2759
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-00_001450.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size3090
Cds size738
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.918.1prot_C-linearis_contig104.918.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig104 504398..508747 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927389.8577092-UTR-C-linearis_contig104:504257..5043971622927389.8577092-UTR-C-linearis_contig104:504257..504397Chordaria linearis ClinC8C monoicousUTRC-linearis_contig104 504258..504397 +
1690879671.5899801-UTR-C-linearis_contig104:504257..5043971690879671.5899801-UTR-C-linearis_contig104:504257..504397Chordaria linearis ClinC8C monoicousUTRC-linearis_contig104 504258..504397 +
1622927389.9039662-UTR-C-linearis_contig104:508747..5109591622927389.9039662-UTR-C-linearis_contig104:508747..510959Chordaria linearis ClinC8C monoicousUTRC-linearis_contig104 508748..510959 +
1690879671.6465726-UTR-C-linearis_contig104:508747..5109591690879671.6465726-UTR-C-linearis_contig104:508747..510959Chordaria linearis ClinC8C monoicousUTRC-linearis_contig104 508748..510959 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927389.867522-CDS-C-linearis_contig104:504397..5045741622927389.867522-CDS-C-linearis_contig104:504397..504574Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 504398..504574 +
1690879671.6079078-CDS-C-linearis_contig104:504397..5045741690879671.6079078-CDS-C-linearis_contig104:504397..504574Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 504398..504574 +
1622927389.8766015-CDS-C-linearis_contig104:507253..5074031622927389.8766015-CDS-C-linearis_contig104:507253..507403Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 507254..507403 +
1690879671.619288-CDS-C-linearis_contig104:507253..5074031690879671.619288-CDS-C-linearis_contig104:507253..507403Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 507254..507403 +
1622927389.8853846-CDS-C-linearis_contig104:507855..5080431622927389.8853846-CDS-C-linearis_contig104:507855..508043Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 507856..508043 +
1690879671.6280441-CDS-C-linearis_contig104:507855..5080431690879671.6280441-CDS-C-linearis_contig104:507855..508043Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 507856..508043 +
1622927389.8945556-CDS-C-linearis_contig104:508524..5087471622927389.8945556-CDS-C-linearis_contig104:508524..508747Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 508525..508747 +
1690879671.6371262-CDS-C-linearis_contig104:508524..5087471690879671.6371262-CDS-C-linearis_contig104:508524..508747Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 508525..508747 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig104.918.1

>prot_C-linearis_contig104.918.1 ID=prot_C-linearis_contig104.918.1|Name=mRNA_C-linearis_contig104.918.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bp
MPRPCRRGRNRALCAAAVLLGLLFFTILAAVTVQSEPDIPFDRYGHVLFT
QGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPY
HRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPE
IEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQ
VFIGGVLAGGLDGEATFQDWQDLLEPLVGGPAARLKLNGTHNSVV*
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mRNA from alignment at C-linearis_contig104:504258..510959+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig104.918.1 ID=mRNA_C-linearis_contig104.918.1|Name=mRNA_C-linearis_contig104.918.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6702bp|location=Sequence derived from alignment at C-linearis_contig104:504258..510959+ (Chordaria linearis ClinC8C monoicous)
GGGACACACGTCAGATAAGCAGGCTTGCCAGGCGAAGGCGAGGCCGACAC
ATTCCAGCGCAATCTCCGTGTTCCTCCACAACAGCTTGTCGAGCTAGCCT
ATCGATCCTTGTGTCTACTCCCCTCGGTGCAAAACACAAAATGCCCCGAC
CCTGTCGACGAGGTCGAAACCGGGCTCTCTGCGCGGCTGCTGTGCTGCTA
GGACTGCTGTTCTTCACTATCCTGGCGGCTGTGACTGTGCAATCGGAGCC
AGACATTCCGTTCGATCGATATGGGCACGTGCTATTCACGCAAGGTTCTC
CAGACGCCGTTGCCAAGGTACCCTATCAAACTGCAATTGAGATTTTCGAG
TATCAACTTACGTAGTCTTTCTTGACTACAAGGGCTTCGGACGTGGGGGC
CTGCCGACCCCCCCGTCCTCCGGTGGCCGTAGGATTTATGGTTTGTTGCG
ATTATTTTTACCCTGCGAGGGCGTCGACGTGGTTACGGTCCGTATGTAAC
CCGGCATGCCAAGGGTGACGATATTTGTGGTCAGGTGAAACACGGGACTG
TCAAAATGTTTTTTTTTTGCGCGCGCACGAAACGACGTGAGATCTCAACG
CGGGACATCTAGTTCACGGACAGCAAGCAGCCGTCTAGGCTGGGATGCTT
CATCATCTGTGTTGTTTCTGCTGTAAGCTCTTTTTGCTACTGCTGTGTTC
CTGATCTGCTGAACTTACAAACCGCCCGTCGTGCTGAAGTTTCAAAACGC
GTCCACCAGATTATTGCTGCCTGTCATTTATGCTGATGGCAATTGCTGAT
AGCAGACTGCTGCTTTGATGCTATGACAGCAGTAGCTTAGTTCCTCTTGG
CCGATGGAACATGCCAAGCTACAGCAACATCCCACGCACACAGGGGCTCT
ACTTGAAGACAGACGAGGTGATATTTTCGCGGAGAGAGTCAGCTAGATAT
CAAGATCCAGCAAGCCGAAACAAGTCTGTTCAAAATTTCAAAATTTCCAG
GGTGATACGTGGTGTTGTGATGGGATGGTATACCATCACTTGATGGGATG
GTAATGGGATGGGATCGTAATCGGGTCGGAATTTTGGTACCATCACAAGA
TACCATCCCATGACCACCACTCCAGTCGGAGACACCATATATGGAGGTGG
TGGTTTTTGAACGCTTCCCATCCCATCTAGTTTACCACCACGCCAGTCGG
AGACACCATCAGTATACAGGTGGTGGTTATTGAACGCTTCCCATCCCATC
TAATTTACCATCACAGCTATTAAAGTTACCACCATCCCATCGATAACAGT
CTTCTCTCACCCATTCCTCTTTTCAGAGATCTACATACCACGAATACCAC
CCCGTTCATCTCGCCCCCCCTCCCCCCCCCCCTATGCAGCACAACGTACT
TTCTGAGGGAGGGGTGTGTAAGGGCAGAAAATGTGTGGGATAGGGAGGGG
TAGGGGGTTCGACCCGCTACACACACACAGACACACGCAACACGTGGCAG
TGAACGCTGTAGGGCCTGCCCGCTGGCCGCATGTGGGTTTGTTTGCTAGC
ACGTTTGTAAGCAGGCGTAGATACCACCAGGTGTCAGGCGGAGAGGAACT
TTTCCGCCGTCAAGCAGGTCCTTAGTGACTTGCGTGCCGGTACCCTGCCC
CGTAAGATCGAGCAGATGCTGTTGCTCAGGCTTCACAGGCGCCTCATCCC
TGGCTTTGCGAAAGTAGAGCAAGAAGAGCTAGCCGCATTGAAGGCAAAGC
ACGATGCAATCGCAAAAGCGGCGGTTTGCCGCCCAGTTTGCCGCCCAGCA
AGCCAGGGAAGGTAACACTGTTACCCTGAACAAGTAGGGTTGCTGTCCGA
CGTTTCAAATACCAGTTTTTTTGTGTTTTTTGTTTTTTGTTTGTTCCTTT
TGTTTTATACGGAGTATTTTTTTAAGCATATTGTGGCCAGAACTTCAAGA
ACACAGCAGTAATAGCGGTATATTTTAGGTAGGAAATAAACAAATATTCA
TGTAAATAAGTTGTCGCCCTGGAAATGGAAAATGCGAAAATACTACAACC
GCGTAGTAGCACGAGACTAATCTACATCCGTCCGCCCACCTTGTCACAAA
CAGCAATAACATGTTGTTCTTTAAAATAACGTTCTTTAGACCACAGCCAA
CTGCAGGCACTAACTCCAGCCGAAGTTCGTATCGTACTTACTTGTCGTGA
TGGGATGGGATGGTAAATGGTGGTTTCGCGTGATGGGATGGGATGGGATG
GGATGGTAACTGGTGGGACGGTGAGTGAGTGTGATGGGATGGGGGAGCTT
TTGCCTTGGCGTGGTGGCGAGAAGATGGTCACACAGAGAACTCTGGTACA
CAGAGGTGCTACCAGTGCTACCCATCCTCCCGCTTGCAATACCATCCCAT
CCCATCGTATTACCATCAGGTGTGCGCGCAAATCCCATCCCATCCCATCA
CGACCAGTACAATACCATCCCATCCCATCGTAATACCGTCAGAAGTGGGC
GCAAATACCATCCCATCCCACGTGATGGGAGGCCTCAAAAAAATTCCACC
TGCGGTGTGCTTTCCATCCCGATGCGATGGTACGTGGCGCAAATTCCACA
AGTTTGCGATTGTGAATGATGTTGCATCATATTTTTGACATGGGTTTCAC
GGACCTCACCCGACCCGAGCGCGTACGATCTCGCCCTCGCCGGCGGCGTG
GTCGGGTTGGAAAGACTTTTGCGTGACGCCACGAAGGGGGAAGCTGAGCG
GCGCTGGCGCGCGCGCGCTGAGACGGTCAACGTTTAACATACTGGTTTCA
GGGGGGTGGAAGATGACCCGCTGCGCTCACAGCGCTCGAGATTAGTTACC
TCAATGTTCGATTTTGCTGTTGAATCCGTTCGTATTGTCACCATATCACG
AAGTATTATTTTCCGCACCTCCTAGCTCGAGGTAGGTAACCCTGCCCAAA
CCTCTTGACTGTTCCTTGATGTTGTCAACGCCGGTGAAAAACGCAGGTGG
AGGTGTACCTCGATCTCGCGTGCTCGGACTGCGCGCTCACCTGGCCGGTC
TTGACCCAGGTTGCCGAGGCGTACGGCCATCAAGCGGAGTTCCTGTATCG
CCTCTTTCCGCTGCCTTACCACAGGAATGCCTTCACCGCCGCAAAGGTGA
GACAAGGCCGGCCACCTTTGGTTGGCGCTCTAAATGCATCAGAAAGAACC
CCGCAGAAGTTCGGGTAATGACAGACTTGACGCTGAGTTGTTCCAACCAG
CCTGACGCCGAAAAGCGCCTAGTGTCTACTGAACGATGACTACAGCAGTG
GGCGCCCGCTGACAAGAAAAACTCCTCATTGAAAAAAAGGACCAAACTTC
CGCTAAGAAAAAGAAAGTCGGGTCGGAGACATAGCTCGGTCGCGGATCCT
GCGCCAAATAAACCCTATACAAAGCCCTACCGTGTGTGGCGGCGAATAAG
AAATTGAGCCTCGACCCATATTTTATATTTTACGTTTTTTGAGAGTGGGG
GCTCACCGGTATGTAGCTAACCGGCCAGCAGGGGCCCCAGATGCGACGAT
AAAGTTTGCGCGTATTTTTTATTTCCGCGCCGACCCAATAATGAGCAGGC
GGCTAAGGTGGTCAGTCTCTACTCCGACAGCGACAACGAAATCGCGTCCT
TCTTCACGGCGGTCTTCGACGGTCAGGATCGAATCTCGAACGATGCCACC
GAGGACTTGACGCAGCCTGAAATCGAGGCGATCTTGGCGGACTGGGCCAC
CTCCGCCACGGGCGTAAGCGAGAAAGCTTTCAACACGTGAGAACGGGGTC
GGGGTTTACAGCGGTACATTGTTTCCCCTCCCCAGGATCGTAGGATCGTA
GGCGTTGTGTGTTACATGTGCACCGAGCACCCAGAAGAGAAACCGATGAC
ATGAATTATGCGCAAAGGACTGCAAGGTAACTTCACTTACGAAACCCCAA
GCGAAGCAAGTGAAAGACTGTGCCTTGCCCCCGGGGGTCGTGTGCCACTT
TTTGTTTTTGCTTTTGTGGGACGGCGGTCTTGCAGCGCCTTGTCTCTGCA
GCTGGATAAAAACGGCGGTGTTCTAGTGACAAGAGTATGCACCGAGACTC
TTCCCCAAAACAGTTTTTTCGCGCCACCCCCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGTTGAAGGGTTTTAGCGTACTTGGGCGCCATCGCTTGTCTC
TCGCTTACCCCGCTGCTGCTCGTGCCCCAACCGCCGCCTTTCCTTCCTTC
CGTGTGCTGCTTCGCAGGGGTATGTCTGACGACGAGGCCGACACGCTAAC
GAGATTTCAGTTCAAGTACGGGTGTCTTCACGGGGTGTTCGGCACTCCGC
AGGTCTTCATCGGGGGCGTTTTGGCGGGCGGCTTGGACGGGGAGGCGACG
TTCCAAGACTGGCAGGACTTACTCGAGCCCCTGGTCGGCGGCCCTGCCGC
GAGATTAAAGTTGAATGGTACGCATAATAGCGTCGTGTGATGTGTCGGGT
GCAAGAACCAACTCTATTCTGCAATTAGCGACCGTACGTGGTGGTACTTC
TATGTGTTTGGTTCTCGACCATCCGCTGTTTGTCGATTTGACTAGTCCAT
ATCGCGCCAGGACTTTTCTCAAAACATTATTGTAGCCTGTTTCTGTGTCT
GCACGATAATGTTCGAAGATGGCGCTGGCGCAATTTAGACTAGTCTCAAC
AATAAAGTATCGTCGATAACCAAGCACACAAAACGCAAAGTACGGCCATG
ACGGCGGCCGCTCATTGCGGACGAGGTGGGGGGAAGTAGAGGAGATTGGG
GCTGACGTTCAGAAAGCAGATATGCTGACCACGAGCTTGGGCGCGGTATT
GCTGTATAGTGTCTCAAGGGCCGCCTCTTGCTTCTAGGAGTGTAATCGCC
TCCCCTCTTCGCAATCAGACTTCCTGTGTGTGTCTTGAGGTTCGGGCAGC
GAATCAAAACGGAATCTGTCTTGACCGAAATTCGGGACATCTGTGTAGGG
AGAAATGTGTTCGTTGCTATCGTATGTAAATACAAGTAATGTGAGATTCT
TTTTTGAGGTGAGTGAGAGCAAGTACTCGTGAGTGGTGTTGTTTCGAGAC
GACACTGCCATTGTTTTGAGAGGACATTGATCCAGAGCTTCGTGTCTTAG
GTACCAAAACTACTGTAGAATTACATAGTTCTTGAGGATACTGCTGTATG
TACATGGGATGTCTGTACTTTTTTGCTGTGTGTGTGTCTGACACAGTATT
TTGAAGGCGTGTCTCTGAGTCTGTAACCGCCAGTTGAACACAACTACGGC
ACATCTTTTGAGCGTGTGTTTTGGCACGAACGCTTCGCTGACGGCAACAA
CGGCGGTCACCCATGCTGTCTCAAGATCGTGTTGAGCGGTTGGGTCAGAT
GTACATCTTTACATCTTTGGTGACATTGTGACAGGTACATCCCCCCCTCT
CCGATTGTAAGGATGGGCCTGGAGATTTCAGCACGATATTTTAAACCGCC
TGCGGGCACAACCACGATCGTGTCCTGGTGTGCGGATGATGGTGAAGCAA
GCTGCTACTTGTCTGCATACATATGTGTGGAGATATTTGTTGTCGTAGAT
TCTCGTTCGGCCTGATATTGGCGCGCACCGTATCTGCCGGTTTTCTTTGA
ATTCGATACCCGCTGTTCCTCCAAACTCAGGCTGGCAGTTTTTATGAATA
CCGAGGCGTGGCTGCGGGGCTGGTGATCCTAGTTTTCGTGAGCGTGTAAC
AAAGAGCAAAGTAGATAGGGCATAATATGTAATTTAGTCTTTCTTCCCTG
GCCAACTGATTTCAATCCGAACTACCGAGCGTCCCAAGAGTAGATTCCCT
CCCATCAACAGGTGTGTCGAAGCATATCATACAACGCCAATATAAATCAG
TCCAGACACCGCAATACGCAACCCCATCGCGCAACAACCACCACCCTCGT
CCTCAACCAAAATTCTACCCTATTTATGCACCCGTAAATAGTGGGTCACC
AAGCAGCAACAACGCTTTGTTGATGGTGGGCCACCCACCAAAGCGAAAAA
CCCGCTGACTAAAATCAAAACCAAACGGTGTGCTGCAACCAATCTAAAGC
TCTACCGTATCGGGGCTGCTGTTTCTCCTCTATTGTACACGGCAGTGTAA
AGGTCTATTAGAGCCACCAGCAGCTTCCACTGCTATGTTGGGAGCGCAAA
TGAGCACTACCATTGCCGTCATGTCCCCTCCTCCGACGCCCTAACCAACA
CCTATTTCCCCACCCACAGCAAGCAAGAGATTTTGGCAAGTTAAGCCCTC
CCCGTGCACACGCAAAACAGCACAGCGCGCAAAAATCTATATATTCGTGG
CGACTGGGGTCTGATACCCACGTCCCCATCCCCAGCCGTAGCAAAAGGCT
TGGTTGGTATGTAAGTGCAATTGCACGTCAAACCCCGCTCCTCCCCATAC
CCAACACAGCGAAATCGATAGCACCAGCAAAGGCACAGCCGGGCCTCGGA
GTAGGCTTCTCTCCACTTACGTACGGAACAAAACTGACCGCACGCCGGTA
TAGCAAACCGACGACGGATCTTAACAAGCCCAATATTTGTTTTTATACTT
TCATTTTTCGTCTTCACATTTATTTCCAGAGTTCGCAGGGGCGCCTTGCC
ACGCGGGGCATCTTGCCAGAACATCTGAACCGTGGTCACACAGAAGGCTC
CT
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Coding sequence (CDS) from alignment at C-linearis_contig104:504258..510959+

>mRNA_C-linearis_contig104.918.1 ID=mRNA_C-linearis_contig104.918.1|Name=mRNA_C-linearis_contig104.918.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at C-linearis_contig104:504258..510959+ (Chordaria linearis ClinC8C monoicous)
ATGCCCCGACCCTGTCGACGAGGTCGAAACCGGGCTCTCTGCGCGGCTGC
TGTGCTGCTAGGACTGCTGTTCTTCACTATCCTGGCGGCTGTGACTGTGC
AATCGGAGCCAGACATTCCGTTCGATCGATATGGGCACGTGCTATTCACG
CAAGGTTCTCCAGACGCCGTTGCCAAGATGCCCCGACCCTGTCGACGAGG
TCGAAACCGGGCTCTCTGCGCGGCTGCTGTGCTGCTAGGACTGCTGTTCT
TCACTATCCTGGCGGCTGTGACTGTGCAATCGGAGCCAGACATTCCGTTC
GATCGATATGGGCACGTGCTATTCACGCAAGGTTCTCCAGACGCCGTTGC
CAAGGTGGAGGTGTACCTCGATCTCGCGTGCTCGGACTGCGCGCTCACCT
GGCCGGTCTTGACCCAGGTTGCCGAGGCGTACGGCCATCAAGCGGAGTTC
CTGTATCGCCTCTTTCCGCTGCCTTACCACAGGAATGCCTTCACCGCCGC
AAAGGTGGAGGTGTACCTCGATCTCGCGTGCTCGGACTGCGCGCTCACCT
GGCCGGTCTTGACCCAGGTTGCCGAGGCGTACGGCCATCAAGCGGAGTTC
CTGTATCGCCTCTTTCCGCTGCCTTACCACAGGAATGCCTTCACCGCCGC
AAAGGCGGCTAAGGTGGTCAGTCTCTACTCCGACAGCGACAACGAAATCG
CGTCCTTCTTCACGGCGGTCTTCGACGGTCAGGATCGAATCTCGAACGAT
GCCACCGAGGACTTGACGCAGCCTGAAATCGAGGCGATCTTGGCGGACTG
GGCCACCTCCGCCACGGGCGTAAGCGAGAAAGCTTTCAACACGCGGCTAA
GGTGGTCAGTCTCTACTCCGACAGCGACAACGAAATCGCGTCCTTCTTCA
CGGCGGTCTTCGACGGTCAGGATCGAATCTCGAACGATGCCACCGAGGAC
TTGACGCAGCCTGAAATCGAGGCGATCTTGGCGGACTGGGCCACCTCCGC
CACGGGCGTAAGCGAGAAAGCTTTCAACACGGGTATGTCTGACGACGAGG
CCGACACGCTAACGAGATTTCAGTTCAAGTACGGGTGTCTTCACGGGGTG
TTCGGCACTCCGCAGGTCTTCATCGGGGGCGTTTTGGCGGGCGGCTTGGA
CGGGGAGGCGACGTTCCAAGACTGGCAGGACTTACTCGAGCCCCTGGTCG
GCGGCCCTGCCGCGAGATTAAAGTTGAATGGTACGCATAATAGCGTCGTG
TGAGGGTATGTCTGACGACGAGGCCGACACGCTAACGAGATTTCAGTTCA
AGTACGGGTGTCTTCACGGGGTGTTCGGCACTCCGCAGGTCTTCATCGGG
GGCGTTTTGGCGGGCGGCTTGGACGGGGAGGCGACGTTCCAAGACTGGCA
GGACTTACTCGAGCCCCTGGTCGGCGGCCCTGCCGCGAGATTAAAGTTGA
ATGGTACGCATAATAGCGTCGTGTGA
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