prot_C-linearis_contig104.916.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.916.1
Unique Nameprot_C-linearis_contig104.916.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length343
Homology
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: D8LE65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE65_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 2.030e-105
Identity = 260/335 (77.61%), Postives = 281/335 (83.88%), Query Frame = 0
Query:    8 LSVSGIARHLIAATLALDRSNGIRAAAEQPSGSAGPGPRDIPFVGSAGDQQQEELVFEDLPEGFHDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWGHMRSSPRGLXXXXXXXXXXXXXXXXXXXXXXXXDDLAGSTSGVPKNTIYVQVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAGPWHQQVTCGQWTTCGIRAGDXXXXXXGMSKLKKSHASFEELSSGDHHTCAVDEDGDVECWGDAMQAEMVPDGFQAA 342
            LS S + R L+A  L +DRS  +RAAAE  SG      RD    G A + Q  E+VFEDLPEGFHDD+DSIT+AVGGHHTCALEYRPGVDFGGPVRCWGR+DWGQS PSDDIFVQVSAG+RHTCGIKIDQTVSCWGHM  SPRG   XXXXXXXXXXXXXXXXXXXXXXDD+AGSTSGVP NT +VQVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FR GPW+Q VTCGQWTTCGIR  D      G+  L K+ A +EE+SS D HTCAVDE+G+VECWGDA+QAE+VPDGFQAA
Sbjct:    2 LSCSAVVRILVACVLVVDRSLEVRAAAEPSSGGDR---RDTTLAGLAAETQ--EVVFEDLPEGFHDDIDSITVAVGGHHTCALEYRPGVDFGGPVRCWGRDDWGQSMPSDDIFVQVSAGNRHTCGIKIDQTVSCWGHMPFSPRGFFQXXXXXXXXXXXXXXXXXXXXXXDDIAGSTSGVPANTTFVQVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETQFRRGPWYQ-VTCGQWTTCGIRKHDGGVECWGVKTLNKTGAFYEEVSSADFHTCAVDENGEVECWGDALQAELVPDGFQAA 330          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: A0A7S1UCR5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCR5_9STRA)

HSP 1 Score: 109 bits (272), Expect = 9.280e-24
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 0
Query:   59 QEELVFEDLPEGFHDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWGHMRSSPR 150
            Q +  F +LPEGFH D+D ++++VG +H CA+EY      GGP+RCWG N  GQS P    F+QVSAG  HTC + +DQT+ CWG +    R
Sbjct:   22 QPDGTFTELPEGFHADLDEVSVSVGEYHACAIEYDETQPMGGPLRCWGGNTEGQSDPPGGTFMQVSAGAMHTCALSVDQTIECWGRVEPHDR 113          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: A0A7S2SKA4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA4_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.620e-23
Identity = 45/82 (54.88%), Postives = 60/82 (73.17%), Query Frame = 0
Query:   64 FEDLPEGFHDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWGHM 145
            F+ L EGF+ D+D    + G  HTCALE RP V+FGG VRCWG N+ GQ++P   +F+QVS+G   TCGI++D+TV+CWG M
Sbjct:   34 FDRLEEGFYADLDGTAASAGFFHTCALEMRPSVEFGGVVRCWGFNEHGQASPPPGVFIQVSSGHLFTCGIRMDETVACWGAM 115          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: A0A6G0XV29_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV29_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.140e-18
Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 0
Query:   56 DQQQEELVFEDLPEGF--HDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWG--HMRSSPRGL 152
            D    + V   +P+G   H D+D  T++ G  HTCA+     VDFGG V CWG N  GQ +P D  F+QVS+G  HTCG+ +D+TV CWG  +   SP GL
Sbjct:   37 DSDDAKEVLSPIPQGDIDHVDIDDTTVSAGIEHTCAIHSVSKVDFGGKVICWGDNTLGQGSPPDVEFIQVSSGRFHTCGVTLDETVECWGDPNHAQSPAGL 137          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: A0A485KWP3_9STRA (Aste57867_12850 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWP3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.160e-18
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   72 HDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWG--HMRSSPRGL 152
            H D+D  T++ G  HTCA+     VDFGG V CWG N  GQ+TP D  F+QVS+G  HTCG+ +D+TV CWG  +   SP GL
Sbjct:   76 HVDIDDTTVSAGIEHTCAIHSVSTVDFGGKVVCWGDNTLGQATPPDVEFIQVSSGRFHTCGVTLDETVECWGDPNHAQSPAGL 158          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: A0A024UGL5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGL5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.100e-17
Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   72 HDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWG--HMRSSPRGL 152
            H D+D  T++ G  HTCA+     VDFGG V CWG N  GQS+P D  F+QVS+G  HTCG+ +D+T+ CWG  +   SP GL
Sbjct:   87 HVDIDDTTVSAGIEHTCAIHSVSTVDFGGKVVCWGDNTLGQSSPPDVEFIQVSSGRFHTCGVTLDETIECWGDPNHAQSPAGL 169          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: W4H5W5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5W5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.860e-17
Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   72 HDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWGHMR--SSPRGL 152
            H D+D  T++ G  H+CA+     VDFGG V CWG N +GQS+P D  F+QVS+G  HTCG+ +D+TV CWG      SP GL
Sbjct:  109 HLDIDDTTVSAGIEHSCAIHSVSTVDFGGKVVCWGDNTFGQSSPPDVEFIQVSSGRFHTCGVTLDETVECWGDANHAQSPAGL 191          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: A0A067D4P3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4P3_SAPPC)

HSP 1 Score: 91.3 bits (225), Expect = 2.390e-17
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 0
Query:   72 HDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWG 143
            H D+D  T++ G  HTCA+      DFGG V CWG +  GQ++P D  F+QVS+G  HTCG+K+D+TV+CWG
Sbjct:   27 HVDIDDTTVSAGISHTCAIHSVSAADFGGKVLCWGDDSMGQASPPDAEFIQVSSGRFHTCGVKLDETVACWG 98          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: A0A1V9YN74_9STRA (Uncharacterized protein n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN74_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.530e-17
Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 0
Query:   56 DQQQEELVFEDLPEGFHDDVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWG 143
            D+++   +F   P   H D+D  T++ G  HTCA+      DFGG V CWG +  GQS+P D  F+QVS G  H+CG+K+D+TV CWG
Sbjct:   37 DEEESTPLFGRSPAIQHLDIDDTTVSAGIGHTCAIHSVSAADFGGKVLCWGEDMLGQSSPPDAEFIQVSCGRFHSCGVKLDETVECWG 124          
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Match: A0A225VBP5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VBP5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.450e-15
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   74 DVDSITLAVGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWG 143
            D+D  ++A G  H+CA+  +   D GG V CWG N+ GQSTP    F+QVS G  H+CGI+ID+T+ CWG
Sbjct:   31 DIDETSIAAGIEHSCAIHTQSYEDVGGRVVCWGVNNGGQSTPPPGDFIQVSTGRLHSCGIRIDETLECWG 100          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE65_ECTSI2.030e-10577.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1UCR5_9STRA9.280e-2448.91Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SKA4_9STRA4.620e-2354.88Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A6G0XV29_9STRA2.140e-1845.54Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KWP3_9STRA5.160e-1851.81Aste57867_12850 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UGL5_9STRA1.100e-1750.60Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4H5W5_9STRA1.860e-1750.60Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A067D4P3_SAPPC2.390e-1751.39Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YN74_9STRA2.530e-1745.45Uncharacterized protein n=2 Tax=Achlya hypogyna Ta... [more]
A0A225VBP5_9STRA1.450e-1550.00Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 195..211
score: 28.43
coord: 310..328
score: 40.35
coord: 77..90
score: 44.05
NoneNo IPR availablePFAMPF13540RCC1_2coord: 155..181
e-value: 1.9E-6
score: 27.5
coord: 307..328
e-value: 7.0E-6
score: 25.7
coord: 121..144
e-value: 6.6E-7
score: 29.0
coord: 193..221
e-value: 4.1E-7
score: 29.6
NoneNo IPR availablePANTHERPTHR46146:SF4SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4coord: 186..298
coord: 76..215
NoneNo IPR availablePANTHERPTHR46146:SF4SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4coord: 153..236
NoneNo IPR availablePANTHERPTHR46146FAMILY NOT NAMEDcoord: 153..236
coord: 186..298
NoneNo IPR availablePANTHERPTHR46146:SF4SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4coord: 228..336
NoneNo IPR availablePANTHERPTHR46146FAMILY NOT NAMEDcoord: 228..336
coord: 76..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..342
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 149..340
e-value: 1.3E-31
score: 111.7
coord: 50..148
e-value: 4.3E-13
score: 50.9
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 100..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:494702..498084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.916.1mRNA_C-linearis_contig104.916.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 494702..498084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.916.1 ID=prot_C-linearis_contig104.916.1|Name=mRNA_C-linearis_contig104.916.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=343bp
MRNRRRALSVSGIARHLIAATLALDRSNGIRAAAEQPSGSAGPGPRDIPF
VGSAGDQQQEELVFEDLPEGFHDDVDSITLAVGGHHTCALEYRPGVDFGG
PVRCWGRNDWGQSTPSDDIFVQVSAGDRHTCGIKIDQTVSCWGHMRSSPR
GLFQQLSVGGHHTCGLRREGTAVCWGDDLAGSTSGVPKNTIYVQVVAGRD
NSCGLRPNGQVDCWGGNRVGQSEPPRDVQFRQLSASTSRHVCGLTLEGAI
RCWGRGMRGETDFRAGPWHQQVTCGQWTTCGIRAGDGGIECWGMSKLKKS
HASFEELSSGDHHTCAVDEDGDVECWGDAMQAEMVPDGFQAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II