prot_C-linearis_contig104.908.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.908.1
Unique Nameprot_C-linearis_contig104.908.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length215
Homology
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 3.120e-94
Identity = 167/217 (76.96%), Postives = 175/217 (80.65%), Query Frame = 0
Query:    1 MKSKNSSSSSESYFRAQYESACKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGTAPMSTSPSPA---PAVASSGHVNEMKSEVRPPSRAVFDPRVGLATAHLDSLSLMGGXXXXXXXXXXXXXXXXXVATGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDLCWAPDGRSLLSASFDQV 214
            MK KNSSSSSES+FRAQYES CKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAG+AP S S +PA   P  ++ G+V        PPSR VFDPRVGLATAHLD+L LM G                  A GRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYP+SQVACLEGHRQLISDLCWAPDGRSLLSASFDQ 
Sbjct:    1 MKGKNSSSSSESFFRAQYESVCKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGSAPASASLAPAAARPGASTGGNVTG------PPSREVFDPRVGLATAHLDALGLMNGGGIGVGSSGSGF------AAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQT 205          
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: D7FIJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ7_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 9.720e-43
Identity = 96/147 (65.31%), Postives = 103/147 (70.07%), Query Frame = 0
Query:    1 MKSKNSSSSSESYFRAQYESACKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGTAPMSTS---PSPAPAVASSGHVNEMKSEVRPPSRAVFDPRVGLATAHLDSLSLMGGXXXXXXXXXXXXXXXXXVATGRVLVAEAKL 144
            MKSKNSSSSSES+FRAQYES CKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAG+AP S S          A+ G+V        PPSR VFDPRVG+ATAHLDSL LM G                 +  GR+LVAEAKL
Sbjct:    1 MKSKNSSSSSESFFRAQYESVCKERDALQGTIEAQERDIDELKKSVYELSYMLSMQGSAGSAPASASLXXXXXXXXAATGGNVTG------PPSRKVFDPRVGIATAHLDSLGLMNGGGIRVGSNGIR------IPAGRILVAEAKL 135          
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.990e-23
Identity = 71/161 (44.10%), Postives = 80/161 (49.69%), Query Frame = 0
Query:   36 ERDIDELKKSVYELSYMLSMQGSAGTAPMSTSPSPAPAVASSGHVNEMKSEVRPPSRAVFDPRVGLATAHLDSLSLMGGXXXXXXXXXXXXXXXXXVATGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISD 196
            ER+ +ELKKSVYELSY+LS Q S G A    S            ++       PPSR    P     +AH    S                      A  R L    KL GHTAAVY   FSP  +LVAS GFDRT+RLWEG YP SQVACL  HRQL+SD
Sbjct:    2 ERENEELKKSVYELSYVLSTQTSTGAAAKVFS------------LDGADRAPPPPSRPGHPPSPFKVSAHAHGAS---------------------AAPDRRLNPAGKLVGHTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSD 129          
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: A0A1V8SS61_9PEZI (Uncharacterized protein n=4 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SS61_9PEZI)

HSP 1 Score: 59.3 bits (142), Expect = 7.280e-7
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 0
Query:  143 KLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDLCWAPDGRSLLSASFDQ 213
            +++GH+A ++ A+FSP  + +ASAG DR + LW  +   +    L GH+  + DL W+ D + + SAS D 
Sbjct:   55 EMTGHSAEIFAARFSPSGAHIASAGADRDILLWHSSGDCANYGTLVGHKSAVLDLHWSRDSQVIYSASADM 125          
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: W4FPT3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPT3_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.940e-6
Identity = 56/204 (27.45%), Postives = 88/204 (43.14%), Query Frame = 0
Query:    8 SSSESYFRAQYESACKERDALQGTIEAQERDIDELKKSVYELSYML-------SMQGSAGTAPMSTSPSPAPAVASSGHVNEMKSEVRPPSRAVFDPRVGLATAHLDSLSLMGGXXXXXXXXXXXXXXXXXVATGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQ--VACLEGHRQLISDLCWAPD 202
            SS  ++ R QYE+  KE   L+G             +SVYELS  L       S  G +GT+ + +S S A    S  + N++ ++         +       ++L+SL+                      +  R+   +++L GH  AVY  KFSP   L+AS   D  + LW+    F+Q  +A L  H QL+ D+ W+ D
Sbjct:    2 SSDNNHLRVQYEALLKENKQLKGVXXXXXXXXXXXXRSVYELSLKLDSTGKPVSHPGGSGTSNIGSSSSSAETGPSVFNANDLLAK---------NSATETTPSYLESLT------------PNMDDDDQQASNPRIFFQKSELRGHGGAVYTTKFSPCGRLLASGSLDCKVLLWDVTTKFNQQQLASLGQHSQLVIDVSWSND 184          
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: A0A7S1NRB8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NRB8_9EUGL)

HSP 1 Score: 53.5 bits (127), Expect = 1.250e-5
Identity = 30/65 (46.15%), Postives = 38/65 (58.46%), Query Frame = 0
Query:  151 VYVAKFSPRDSLVASAGFDRTLRLWEGAY-PFSQVACLEGHRQLISDLCWAPDGRSLLSASFDQV 214
            +Y A FSP  SL+A  G+D  + LW GA      +  L GH   +S L +APDGR+LLSAS D  
Sbjct:    2 IYGADFSPDGSLLALGGWDGRVSLWGGANGALCLLRTLTGHTGFVSALAFAPDGRTLLSASGDAT 66          
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: A0A2D6SVI3_9PLAN (Non-specific serine/threonine protein kinase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SVI3_9PLAN)

HSP 1 Score: 55.1 bits (131), Expect = 2.850e-5
Identity = 32/80 (40.00%), Postives = 41/80 (51.25%), Query Frame = 0
Query:  133 ATGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDLCWAPDGRSLLSASFD 212
            +T   + AE    GHT  V  A F P   L+ASAG DR +RLW  A     +    GHR  I  + ++PDG+ LLS   D
Sbjct:  782 STPLTITAEKTFHGHTGIVLSAAFCPDGRLIASAGLDRMIRLWNVATG-KTIRIAVGHRSSIRSVKFSPDGQFLLSGDGD 860          
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: A0A1V2LDD2_CYBFA (Protein HIR n=2 Tax=Cyberlindnera fabianii TaxID=36022 RepID=A0A1V2LDD2_CYBFA)

HSP 1 Score: 54.7 bits (130), Expect = 3.670e-5
Identity = 32/88 (36.36%), Postives = 42/88 (47.73%), Query Frame = 0
Query:  140 AEAKLSGHTAAVYVAKFSPR---------------DSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDLCWAPDGRSLLSASFD 212
            ++  L GH     VA FSP                 S+VA+AG D++L +W   YP   V   E   + I+DLCW PDG SL  +S D
Sbjct:  231 SDISLIGHDNPCEVASFSPVLYEVESPGASKEKKISSVVATAGHDKSLAIWNNMYPRPVVVFEEFSMKTITDLCWTPDGSSLFVSSLD 318          
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Match: A9V9T1_MONBE (Lactoylglutathione lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9T1_MONBE)

HSP 1 Score: 54.3 bits (129), Expect = 4.880e-5
Identity = 27/81 (33.33%), Postives = 39/81 (48.15%), Query Frame = 0
Query:  134 TGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDLCWAPDGRSLLSASFDQV 214
            T  ++    +L GH  AVY   FSP   ++A+AGFDR + +W        +  L+GH   +  L WA     L S S D+ 
Sbjct:   64 TSNLMAPVMRLEGHAEAVYAGTFSPSGHMLATAGFDRNVYVWNTFGNCENIMSLQGHTGAVLGLHWAKLENRLFSCSSDKT 144          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KNQ7_9PHAE3.120e-9476.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIJ7_ECTSI9.720e-4365.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSR1_9STRA1.990e-2344.10WD40-repeat-containing domain protein (Fragment) n... [more]
A0A1V8SS61_9PEZI7.280e-736.62Uncharacterized protein n=4 Tax=Rachicladosporium ... [more]
W4FPT3_9STRA4.940e-627.45Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S1NRB8_9EUGL1.250e-546.15Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A2D6SVI3_9PLAN2.850e-540.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A1V2LDD2_CYBFA3.670e-536.36Protein HIR n=2 Tax=Cyberlindnera fabianii TaxID=3... [more]
A9V9T1_MONBE4.880e-533.33Lactoylglutathione lyase n=1 Tax=Monosiga brevicol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..45
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 142..213
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 137..176
e-value: 2.5E-6
score: 37.0
coord: 180..214
e-value: 1.3
score: 16.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 143..175
e-value: 4.6E-4
score: 20.9
coord: 184..213
e-value: 0.036
score: 14.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 144..176
score: 13.951
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 187..214
score: 9.573
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 133..214
e-value: 1.3E-18
score: 69.1
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 163..177
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 144..214
score: 17.456
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 143..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:448991..452004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.908.1mRNA_C-linearis_contig104.908.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 448976..452608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.908.1 ID=prot_C-linearis_contig104.908.1|Name=mRNA_C-linearis_contig104.908.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=215bp
MKSKNSSSSSESYFRAQYESACKERDALQGTIEAQERDIDELKKSVYELS
YMLSMQGSAGTAPMSTSPSPAPAVASSGHVNEMKSEVRPPSRAVFDPRVG
LATAHLDSLSLMGGGGMGVGVGVVGGGGGGGVATGRVLVAEAKLSGHTAA
VYVAKFSPRDSLVASAGFDRTLRLWEGAYPFSQVACLEGHRQLISDLCWA
PDGRSLLSASFDQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf