prot_C-linearis_contig104.893.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.893.1
Unique Nameprot_C-linearis_contig104.893.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length755
Homology
BLAST of mRNA_C-linearis_contig104.893.1 vs. uniprot
Match: D8LEA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA8_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 8.900e-63
Identity = 205/557 (36.80%), Postives = 259/557 (46.50%), Query Frame = 0
Query:   81 EDEMCEAHVTLGRLSHVKACHGETSEQMMRSLADAGAREAVEAAMAKGRSDYETLKENLEKLYRKSMADLHKRKMTVEAPTRARVELVAGQKKAADDAEKELKVLMANPNEGVLTRELPQALRRANKVLKASIKLIGLRLPEVKPVTVKDFPPGRLHNVIIAPRRSGQGQRXXXXXXXXXRTGGVRKRPPSTKPPRVTAAHEEGEAEEAHRERQSRPPIPLRSMSSSSPFSDNGDKLSSRSLPGSQSQSLASAASAVAPGDEXXXXXXXXXXXXXEAGIRGVAKSECCRNGQSIRHRGAPAGWDEKRGEELGDVGDAPLGVAAKACSHCACACRADDVRAAYRTLRKRYRALKDQADKEDVRARTEEQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKNGKVEPVAPAXXXXXXXXXSSEGV----------------------LASSQLAELRHKVALGEECLQEALHEALSLRQEITKRKQHGEMLLALIRFLKGQMSAYA-NNADWGEGEEKWRGMGTAAPVRPKSDYGSSDSAIDYISP 614
            ED+MCEA V LGRL HV   HGE    M++SL DAG+R+A+++A +K RS+YE+LK+ LE+LY++S+ DL   +  +E PT AR+ELV GQK A   AE ELK +MA  ++ VL RELP  +RRANK LKASIKLIGLRLP+ K                                                          E  A +A                                  GSQ+  +A+AA+A                        G     CCR         A + WD+++ +      D  LG A +ACSHCACACRAD+V AAYRTLRKRY+ALK QADKE++R   EEQ +             XXXXXXXXXX                 G  G   P A A          ++G+                          + A LR KVA+GEECL +AL EALSLR+EI +RKQHGE+L A IRFL+GQ SA+  N+A   EG+          P  P    G SDS  + ISP
Sbjct:    2 EDDMCEASVILGRLGHVNERHGEAMSLMVKSLVDAGSRDAIKSATSKVRSEYESLKQKLEELYQQSIQDLQAHRSIMEGPTIARIELVTGQKGAVGHAEDELKEVMAKTDQEVLRRELPDVMRRANKTLKASIKLIGLRLPKAK----------------------------------------------------------EQAAAKAR---------------------------------GSQAGEVAAAAAA------------------------GQGGPGCCR---------AASAWDDEQSDRGRGPADTALG-APEACSHCACACRADEVWAAYRTLRKRYQALKSQADKEELRVNAEEQCREMQSELGRQRVKMXXXXXXXXXXMDEDLVKIVSEIHAELYGNRGDRGPAAAAERGDKEAEAGTDGLGITQVDLQSLRDVVQASFKESQAVKEESAALREKVAIGEECLYDALQEALSLREEIARRKQHGEVLFARIRFLQGQASAHVKNSAKTREGD----------PRSPADSTGDSDSHSEPISP 423          
BLAST of mRNA_C-linearis_contig104.893.1 vs. uniprot
Match: A0A6H5K5N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N0_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 3.260e-33
Identity = 133/402 (33.08%), Postives = 164/402 (40.80%), Query Frame = 0
Query:  202 LRRANKVLKASIKLIGLRLP---EVKPVTVKDFPPGRLHNVIIAPRRSGQGQRXXXXXXXXXRTGGVRKRPPSTKPPRVTAAHEEGEAEEAHRERQSRPPIPLRSMSSSSPFSDNGDKLSSRSLPGSQSQSLASAASAVAPGDEXXXXXXXXXXXXXEAGIRGVAKSECCRNGQSIRHRGAPAGWDEKRGEELGDVGDAPLGVAAKACSHCACACRADDVRAAYRTLRKRYRALKDQADKEDVRARTEEQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKNGKVEPVAPAXXXXXXXXXSSEGV----------------------LASSQLAELRHKVALGEECLQEALHEALSLRQEITKRKQHGEMLLALIRFLKGQMSAYANNA 578
            +RRANK LKASIKLIGLRLP   EVK +TV+ FPP RLHN +I                                   VTA  E+  A+                                    GSQ+  +A+AA+A                        G     CCR   +         WDE++ +      D   G A +ACS CACACRAD+V AAYRTLRKRY ALK QADKE++R   EEQ +                                        G  G V P A A          +EG+                          + A LR KVA+GEECL +AL E+LSLR+EI +RKQHGE+LLA IRFL+GQ SA+  N+
Sbjct:    1 MRRANKTLKASIKLIGLRLPKASEVKRITVEGFPPSRLHNAVI-----------------------------------VTAPEEQAAAKAR----------------------------------GSQAGEVAAAAAA------------------------GQGGPGCCRTASA---------WDEEKSDRGRGPADTAPG-APEACSRCACACRADEVWAAYRTLRKRYHALKSQADKEELRVSAEEQCREMQSELGRQRVKMEAEFDEKKSKMNKDLVNIVSEIHTELYGNRGNVGPAA-AGRGHKEAEAGTEGLGITQVDLQSLRDVVQASFKESQAVKKESAALREKVAIGEECLHDALQESLSLREEIARRKQHGEVLLARIRFLQGQTSAHVKNS 298          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEA8_ECTSI8.900e-6336.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5N0_9PHAE3.260e-3333.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..145
NoneNo IPR availableCOILSCoilCoilcoord: 415..462
NoneNo IPR availableCOILSCoilCoilcoord: 168..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:296462..312526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.893.1mRNA_C-linearis_contig104.893.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 296460..312526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.893.1 ID=prot_C-linearis_contig104.893.1|Name=mRNA_C-linearis_contig104.893.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=755bp
ADHGSEPRRKRLYFTQKLPPHAPCAHCLASLPVACVPSGICPRGRKAHTS
AVERRTGMAAAKRDTPADEDHGKTRLNQRKEDEMCEAHVTLGRLSHVKAC
HGETSEQMMRSLADAGAREAVEAAMAKGRSDYETLKENLEKLYRKSMADL
HKRKMTVEAPTRARVELVAGQKKAADDAEKELKVLMANPNEGVLTRELPQ
ALRRANKVLKASIKLIGLRLPEVKPVTVKDFPPGRLHNVIIAPRRSGQGQ
RDRAQPQPRPRTGGVRKRPPSTKPPRVTAAHEEGEAEEAHRERQSRPPIP
LRSMSSSSPFSDNGDKLSSRSLPGSQSQSLASAASAVAPGDEAAAAAVAA
GAAAAEAGIRGVAKSECCRNGQSIRHRGAPAGWDEKRGEELGDVGDAPLG
VAAKACSHCACACRADDVRAAYRTLRKRYRALKDQADKEDVRARTEEQRK
EMQAELDGQKYEMRAELDRKKLEMEAEFETRKRVMQANFNGKNGKVEPVA
PAPAPAQAAAASSEGVLASSQLAELRHKVALGEECLQEALHEALSLRQEI
TKRKQHGEMLLALIRFLKGQMSAYANNADWGEGEEKWRGMGTAAPVRPKS
DYGSSDSAIDYISPRSRANAGARQPKAAARHQRPRPRKSGTGASGDDALR
HPAFRRSRSAADGHGTDGYPSPPGELRKPKAAARHQRPRRLDADIGASED
DALRYAAFPGSPSKADGHDTGGYQSPPGELPRAPDVAGGDNSWIERAGGA
MSGLW
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