prot_C-linearis_contig104.890.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.890.1
Unique Nameprot_C-linearis_contig104.890.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length606
Homology
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 5.770e-123
Identity = 273/671 (40.69%), Postives = 353/671 (52.61%), Query Frame = 0
Query:    1 PCRVAVAISGDVRSFVDPGVHRSFRRHVVESIKKNGCQVDVFAYAILKDDMDFLIGEEEGKLDFVQELADIEASFKFLSPTPTRVVWHQGQAGLIPNSC--PGSTHYYGGGTAS--SXXXXXXXXXXXXXXXXXGSRYRDQVSTGGAHVSRLPQVGWTLRREETSRIRAYWRLYGSLAAYRMAVQKEGEENEDS-----NKDDGFAYDWIVATRFHVAWLRPLPPLRAFSREAVWVGASVWPISDEIALVPRAFADRYFSAVSAFHSCDSG---SWPPGEPWWQPECG-----------------------------GGGGFQ-----------------------ESVLFRHLHANNVAYRPYPMFDYHVVQPQREDGGGERD--GDNGCGAKTAA-EHETACVILGAASLLPSRCVRRRDCNAALSEYAGLRCRTLTGL------HSRERVAPETFLEPEDPTAWEAALVGAPVDEERTNARAGENQGGLNMGALH--DLDRIRSKLVSLRDAVWVGSKGLQMQFEGTEERL----NPEDLQTSGFHQSQQRRRNVEK---------PEPE------ETRYSWAINSQDSCCIEEYPGRAPHVIRSYSTEPSLMKEMALATMCIAHRLSGGHRL------DGTDDFNICSGGRSLELVMVDVLLHSEEL 571
            PC VAV+ISGDVRSFVDP +HRSFRRHVVE+IK  GC VDVF YA L D+ D L+ ++       + + +IEA+ +FLSPT  ++VWHQ QAG+IPNSC    +T   GGG  +  S                 G   R     G  H S+ P    +  +  T   R YW+LY SLAAYR+AVQ+E E+ +++     +      YDWIV TRF VAW + LP  RAFSR+ VW  A  WP+S   ALVPRAF+DR+FSAV AFH+CD G   SWPPGE WWQP+CG                             GGGGF+                       ES+++RHLHA+ V YRPYPMF+Y+ V P   DG  + D  GD   G +T+  ++ T CV+LG   L  S+     +C  ALSE++ L CRT T L      H  ER +    L+P D T W  + VG   DE  T+   G+  G      +   DL R    L +LRDAV V +       +G+EE +    N  +  T     S   RRN+ K         P+P       +T  SW+++SQ  C + EYPGRAPH+IR  ST+   M+E+ALAT C+AHR   G         D   D  +C+  RSLELVM+DV LHS E+
Sbjct:   38 PCAVAVSISGDVRSFVDPVLHRSFRRHVVEAIKAEGCTVDVFVYASLGDE-DLLVEQD------AETIRNIEATMEFLSPT--QLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDNRSNQPRG--HASKEPSKPPSREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEHGQENGNSSGNVHSGGNLHHSPRSGPAGGGGGFELRGSDDGSIFHDNRGGGRGEGFGESIVYRHLHASGVPYRPYPMFEYYTVPPYVRDGDADGDAAGDTRSGCETSTPDYFTGCVLLGTVGLF-SQAYTSEECATALSEWSSLHCRTSTHLEATGPGHQTERGSEN--LDP-DLTTWPRSSVGVYPDETETDN--GDVLGAAEADRVQEEDLRRAWFNLAALRDAVIVAAD------DGSEEVMHGSSNAGEEDTPSGETS---RRNLGKEDGGDHDAAPKPSGSSPTRQTNRSWSVHSQGGCRLNEYPGRAPHIIRHSSTDSHRMRELALATKCLAHRFIEGATAWSSVNEDFGFDATVCASSRSLELVMIDVSLHSAEV 682          
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 1.590e-117
Identity = 234/618 (37.86%), Postives = 324/618 (52.43%), Query Frame = 0
Query:    6 VAISGDVRSFVDPGVHRSFRRHVVESIKKNGCQVDVFAYAILKDDMDFLIGEEEGKLDFVQELADIEASFKFLSPTPTRVVWHQGQAGLIPNSCPGSTHYYGGGTASSXXXXXXXXXXXXXXXXXGSRYRDQVSTGGAHVSRLPQVGWTLRREETSRIRAYWRLYGSLAAYRMAVQKEGEENEDSNKDDGFAYDWIVATRFHVAWLRPLPPLRAFSREAVWVGASVWPISDEIALVPRAFADRYFSAVSAFHSCDSGSWPPGEPWWQPECGGGGGFQESVLFRHLHANNVAYRPYPMFDYHVVQPQREDGGGERDGDNGCGAKTAAEHETACVILGAASLLPSRCVRRRDCNAALSEYAGLRCRTL---TGLHSRERVAPETFLEPEDPTAWEAALVGAPVDE------------ERTNARAGENQGGLNMGALHDLDRIRSKLVSLRDAVWVGSKGLQMQFEGTEERLNPEDLQTSGFHQSQQRRRNVEKPEPEETRYSWAINSQDSCCIEE--YPGRAPHVIRSYSTEPSLMKEMALATMCIAHRLSGGHRLDGTD-DFNICSGGRSLELVMVDVLLHSEELGVCTADGSSGLTGTEHVQRFFADPSAHCVGYASL 605
            +  SG +RSFV P VHRS R +++ESIK +GC+VDVFAY   +D +  +  ++    +F    +D+E +   L PT  R++WHQ QAG+IPN C G  +                                   T  +  S      W  R    +    YW+LY SLAAYRMA++      E+     GF YDW++  R  VAW RPLPPLR+FSR+AVW G   WP+SD  ALVPR F+DR+FSAV  F++CD  SWPP   WWQPEC   G F+ESVLFRHLHA+ + YR YP+FD+ + +       G   G    G    +E    C +LG  + L      R  C  AL+EY+ LRCRTL    G+    RV  +  L+PE P AWEA L  +P+ E              T   + +     ++    D+D  R KLV LRDA+   S  L+  +E                 +  + R  +++    +T   W I+S   C + E  +PG +PHV+  Y+    L++E+  +  C   R+ G  ++ G D + + C+G RSL+LVM+DV LH+EELG+CTADGS GL+ +E V RFF +P+AHC GY  L
Sbjct:    1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTV--VKAKQVENPEFTPNSSDVEVALAVLEPT--RLLWHQDQAGIIPNGCAGVNN----------------------------------RTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALR------EEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIG-FEESVLFRHLHASEIPYRFYPLFDFIITR-------GVIGGVCKLGFIVYSE---VCSLLGLWNALQPP-FSRDHCLEALAEYSDLRCRTLFPARGMEDERRV--DAILDPE-PRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAEDVDSARLKLVLLRDALQAPSP-LEPHYE-------------MALREEAKERSLLDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVQSVKCFVSRIIGETQVGGGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASEQVSRFFDNPAAHCAGYGRL 545          
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 1.370e-112
Identity = 246/626 (39.30%), Postives = 317/626 (50.64%), Query Frame = 0
Query:    1 PCRVAVAISGDVRSFVDPGVHRSFRRHVVESIKKNGCQVDVFAYAILKDDMDFLIGEEEGKLDFVQELADIEASFKFLSPTPTRVVWHQGQAGLIPNSC--PGSTHYYGGGTAS--SXXXXXXXXXXXXXXXXXGSRYRDQVSTGGAHVSRLPQVGWTLRREETSRIRAYWRLYGSLAAYRMAVQKEGEENEDS-----NKDDGFAYDWIVATRFHVAWLRPLPPLRAFSREAVWVGASVWPISDEIALVPRAFADRYFSAVSAFHSCDSG---SWPPGEPWWQPECG----------------------------GGGG------------------------FQESVLFRHLHANNVAYRPYPMFDYHVVQPQREDG----GGERDGDNGCGAKTAAEHETACVILGAASLLPSRCVRRRDCNAALSEYAGLRCRTLTGLHS----RERVAPETFLEPEDPTAWEAALVGAPVDEERTNARAGENQGGLNMGALHDLDRIRSKLVSLRDAVWVGSKGLQMQF---------------EGTEERLNPEDLQTSGFHQSQQRRRNVEKPEPEETRYSWAINSQDSCCIEEYPGRAPHVIRSYSTEPSLMKEMALATMCIAHRLSGG 539
            PC VAV+ISGDVRSFVDP VH SF+RHVVE+IK  GC VDVF YA L D+   L+ E++      + + +IEA+ +FLSPT  ++VWHQ QAG+IPNSC    +T   GGG  +  S                 G   R     G  HVS+ P       +  T   R YW+LY SLAAYR+AVQ+E E+ +++     +      YDWIV TRF VAW   +P LRAFSR+ VW  A  WP+S   ALVPRAF+DR+FSAV AFH+CD G   SWPPGE WWQP+CG                            GGGG                        F ES+++RHLHA+ V YRPYPMF+Y+ V P   DG    G  RD  +GC A T+ ++ T CV+LG   L  S       C  ALSE++ L CR  T   +    R+       L P    AW  + VG    E +T+          +     DL R  S LV+LRDAV + +     +                E +   L  +D    G H +  +  N       +T  SW+++SQ  C + EYPGRAPH+IR  ST+   M+E+ALAT C+AHR   G
Sbjct:   37 PCAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASLGDED--LLEEQDA-----ETIRNIEATMEFLSPT--QLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRG--HVSKEPSKPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEYYAVPPYVRDGDVDGGAARDTRSGCEASTS-DYLTGCVLLGTVGLF-SPAYTSEACATALSEWSSLHCRASTQPEATSTGRQTERASKNLNPYL-KAWPRSSVGVSSGEAKTHRGDVFGTAEEDRVQEEDLKRAWSNLVALRDAVILAADDDSEEATHGSSNAGEDDTPIREASRRHLGKDD---GGDHDAAPKPSNSSPTR--QTNRSWSVHSQWGCRLNEYPGRAPHIIRHSSTDSHRMRELALATKCLAHRFMEG 643          
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: D8LCA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA5_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.870e-21
Identity = 77/263 (29.28%), Postives = 115/263 (43.73%), Query Frame = 0
Query:    2 CRVAVAISGDVRSFVDPGVHRSFRRHVVESIKKNGCQVDVFAYAILKDDMD--FLIGEEEGKLDFVQEL---ADIEASFKFLSPTPTRVVWHQGQAGLIPNSCPGSTHYYGGGTASSXXXXXXXXXXXXXXXXXGSRYRDQVSTGGAHVSRLPQVGWTLRREETSRIRAYWRLYGSLAAYRMAVQKEGEENEDSNKDDGFAYDWIVATRFHVAWLRPLPPLRAFSREAVWVGASVWPISDEIALVPRAFADRYFSAVSAFHSC 259
            CR AV  SG VRSFV P VH S +++++E ++ + C VDVF +  ++D++   +  G+ E  L F        ++E +   L+P    + +HQ QAG IPN C                                                          E    I AYW+LY   A +RM      EE+E +    G +Y W++ +R  +AW+ P+PPL  F    V+ G + +P+SD+  L PR FA   F AVS  + C
Sbjct:   37 CRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGLLNPLS--IEYHQEQAGYIPNGC----------------------------------------------------------ETGCEINAYWQLYKMKAVFRMM-----EEHEATT---GLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRMFAQSIFGAVSLCYDC 230          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G5E2_ECTSI5.770e-12340.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK46_ECTSI1.590e-11737.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ6_9PHAE1.370e-11239.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCA5_ECTSI1.870e-2129.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:250948..255520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.890.1mRNA_C-linearis_contig104.890.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 250948..262739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.890.1 ID=prot_C-linearis_contig104.890.1|Name=mRNA_C-linearis_contig104.890.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=606bp
PCRVAVAISGDVRSFVDPGVHRSFRRHVVESIKKNGCQVDVFAYAILKDD
MDFLIGEEEGKLDFVQELADIEASFKFLSPTPTRVVWHQGQAGLIPNSCP
GSTHYYGGGTASSGGGSDANHGGADAGRGGGSRYRDQVSTGGAHVSRLPQ
VGWTLRREETSRIRAYWRLYGSLAAYRMAVQKEGEENEDSNKDDGFAYDW
IVATRFHVAWLRPLPPLRAFSREAVWVGASVWPISDEIALVPRAFADRYF
SAVSAFHSCDSGSWPPGEPWWQPECGGGGGFQESVLFRHLHANNVAYRPY
PMFDYHVVQPQREDGGGERDGDNGCGAKTAAEHETACVILGAASLLPSRC
VRRRDCNAALSEYAGLRCRTLTGLHSRERVAPETFLEPEDPTAWEAALVG
APVDEERTNARAGENQGGLNMGALHDLDRIRSKLVSLRDAVWVGSKGLQM
QFEGTEERLNPEDLQTSGFHQSQQRRRNVEKPEPEETRYSWAINSQDSCC
IEEYPGRAPHVIRSYSTEPSLMKEMALATMCIAHRLSGGHRLDGTDDFNI
CSGGRSLELVMVDVLLHSEELGVCTADGSSGLTGTEHVQRFFADPSAHCV
GYASL*
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