prot_C-linearis_contig104.876.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.876.1
Unique Nameprot_C-linearis_contig104.876.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length117
Homology
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BLAST of mRNA_C-linearis_contig104.876.1 vs. uniprot
Match: A0A6H5JH51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH51_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 2.480e-14
Identity = 46/92 (50.00%), Postives = 54/92 (58.70%), Query Frame = 0 
Query:    1 MRLGGNLAVCPATESVKRLVQAYLVCEVVYDD---NKRENWFKERAHLAKAEFCLGEDKAALMGVELGEATPAEQRELEKLVSDYRWVGCSV 89
            MR GGNL VCP   S+ RL+QAYLVCEVV D    +K    F+ER           E K  LMGVELGE + AEQ  LE L+SDY +   S+
Sbjct:  166 MRRGGNLIVCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFRERV--------TTERKGGLMGVELGETSTAEQDALENLISDYSFHDASI 249
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH51_9PHAE2.480e-1450.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:140844..141194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.876.1mRNA_C-linearis_contig104.876.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 138295..141270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.876.1 ID=prot_C-linearis_contig104.876.1|Name=mRNA_C-linearis_contig104.876.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=117bp
MRLGGNLAVCPATESVKRLVQAYLVCEVVYDDNKRENWFKERAHLAKAEF
CLGEDKAALMGVELGEATPAEQRELEKLVSDYRWVGCSVTRTCLLLSPAK
RHDVQHYRRKNCHAGW*
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