mRNA_C-linearis_contig104.870.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: A0A6H5JA57_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA57_9PHAE) HSP 1 Score: 845 bits (2184), Expect = 8.230e-299 Identity = 481/547 (87.93%), Postives = 492/547 (89.95%), Query Frame = 3
Query: 285 MATFSNLTSLGDHVEKDDGRSQATGAHKAVDSSAGGDARLRGPAT-----------AADPLAQAAXXXXXXXXXXXXXXXXXXXX----AG--EVGVPADVLKPPEASSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRNKARNDDPIMQIAESDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRVALRRSTFRKGMVAIDGQDDPKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVTN 1874
MATFSNL+SLGDH+EKD R Q H SSAGGD RLRGPA A DPLAQAAXXXXXXXXXXXXXXXXXXXX AG ++ DVLKPPE+SSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDG+QVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTK+DICPPTVLKQTRQALAKYLR NQKMPYPIKD VDAAAESIASDRITPVFAVSNV G GL LLRAFVARLRRNK+RNDDP M I ESDLP VHFPIDGVYEVRGVGIVVGGT+LRGSV VNQ LLIGPDRAGDFIQVTVRSIECKRQSVKE EGQSATFAVRS+NRRVALRRSTFRKGMVAIDG DDP+ATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRV N
Sbjct: 1 MATFSNLSSLGDHIEKDHDRLQV--GH----SSAGGDERLRGPAAMAGGGDNSKVKAGDPLAQAAXXXXXXXXXXXXXXXXXXXXXXXGAGGPKLDESVDVLKPPESSSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKD------VDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPSMPIRESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGHDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVIN 535
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: A0A7S2WNE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNE9_9STRA) HSP 1 Score: 602 bits (1553), Expect = 3.590e-203 Identity = 308/452 (68.14%), Postives = 371/452 (82.08%), Query Frame = 3
Query: 552 ASSVDIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRNKARNDDPIMQIAESDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRV-ALRRSTFRKGMVAIDGQDDPKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVTN*SATLTEGGN 1904
A S ++R+AMIGNVDSGKSTLIGVL+S+ LDDGRG ARS++LRHRHEQENGRTSAV++E+MGY +DG+QVVP AR H QRW E+V +SDR+++LIDLCGHE+YLKTTVFGLTG+MPDF LLVVGANMGVQRMT+EHISIACALQ+PIAVVVTK+DICP VLKQTRQ LAKYLRSN+KMPYP+K Q QVDAAA+++ASDRITPVFA+S+V G GL LL+AF+ARLRRN Q+A +P +HFPIDGVYEV GVGIV GGT+ RG V VNQ LL+GPDR G +I VTVRSIE KRQ V E G SATFA+R++ R+ L+RSTFRKGMV + +D+P+A R+FEA VVILHHSTT++ GYQPV+HCGVVRQ+A+++++ GTES LRTGQ A V FRF+Y++EY++ G+TFLFREGRAKGIGKI R+ GN
Sbjct: 36 AESGEVRVAMIGNVDSGKSTLIGVLTSASLDDGRGLARSVMLRHRHEQENGRTSAVSVELMGY-RDGEQVVPQARHHHQRWTEIVENSDRAISLIDLCGHERYLKTTVFGLTGMMPDFALLVVGANMGVQRMTREHISIACALQLPIAVVVTKVDICPQPVLKQTRQDLAKYLRSNRKMPYPVK---QLDQVDAAADAVASDRITPVFAISSVTGQGLELLKAFLARLRRNSRNFIAEAEQVAPGSMPGIHFPIDGVYEVHGVGIVAGGTLTRGHVKVNQTLLLGPDRTGSYIPVTVRSIESKRQGVSEATPGISATFAIRAIGRKTEGLKRSTFRKGMVLLGEKDEPRAVRQFEATVVILHHSTTISEGYQPVVHCGVVRQSASMVAIHGTES----LRTGQRAQVHFRFLYFAEYVLPGATFLFREGRAKGIGKITRLIEGDPDSPPAGN 479
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: A0A7S2BKI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKI3_9STRA) HSP 1 Score: 598 bits (1543), Expect = 4.600e-202 Identity = 314/464 (67.67%), Postives = 377/464 (81.25%), Query Frame = 3
Query: 564 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRNKARNDDPIMQIAESD---LPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRVALRRSTFRKGMVAIDGQDDPKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVTN*SATLTEGGNEGLRAPPSAELRSR 1946
D+R+AMIGNVDSGKSTLIGVL+S+ LDDGRG ARSLVLRHRHEQENGRTSAVT+E+MGY KDG+QVVP AR H QRWAEVV+ SDR++TLIDLCGHEKYLKTTVFGLTG+MPD LLVVGANMGVQ MTKEH++IACALQ+PIAVVVTK+DICP +LKQTRQ++AK LR N+KMPYP+KD SQ V+AAA+++ SDR+TPVFA+S+V G GL LL+ F+ +L RN P Q A+ LP +HFPIDG+YEVRGVG+VVGGT+ RG+V VNQ LL+GPDR G F+ VTVRSIE KRQSV EV GQSATFA+R + RR ALRRS+FRKGMV + D P A R FEA V+ILHHSTT++ GYQPV+HCGVVRQAA++ ++ G+ES LRTGQ A VRFRFMYY E+++ G+TFLFREGRAKGIGKI + T+ E +E ++ P +AE +S+
Sbjct: 83 DVRVAMIGNVDSGKSTLIGVLTSACLDDGRGLARSLVLRHRHEQENGRTSAVTVELMGY-KDGEQVVPQARQHNQRWAEVVDQSDRAITLIDLCGHEKYLKTTVFGLTGMMPDLALLVVGANMGVQIMTKEHVAIACALQLPIAVVVTKVDICPQPILKQTRQSIAKCLRQNRKMPYPVKDSSQ---VEAAAQAVISDRVTPVFAISSVTGMGLKLLKDFLGKLSRNPRNFLAPTNQPADKSNIPLPDIHFPIDGIYEVRGVGMVVGGTLTRGNVKVNQTLLLGPDRVGVFVPVTVRSIESKRQSVPEVHSGQSATFAIRVLGRRPALRRSSFRKGMVMVHEADKPMAVRHFEAAVIILHHSTTISEGYQPVVHCGVVRQAASMEAIHGSES----LRTGQRAQVRFRFMYYGEFLLPGATFLFREGRAKGIGKITK------TVLEA-SEKIKEPANAEKQSK 531
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: A0A836C8C3_9STRA (Elongation factor Tu GTP binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C3_9STRA) HSP 1 Score: 584 bits (1506), Expect = 4.120e-198 Identity = 303/432 (70.14%), Postives = 354/432 (81.94%), Query Frame = 3
Query: 579 MIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTAR-SHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRNKARNDDPIMQIAESDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRVALRRSTFRKGMVAIDGQDDPKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVT 1871
MIGNVDSGKSTLIGVL + DDGRG+ARSLVL+HRHEQENGRTSAVT EIMGY +G QVVPT++ SH+ RWAEVV +S+R++TLIDLCGHE+YLKTTVFGLTGLMPD+C+LVVG+NMGVQ MTKEHISIACAL+IP+AV VTK+DICP VLKQTRQ LAKYLR N KMPYP+KD +Q V+ AA SIASDRITPVFAVSNV G GL LLR FV++LRR K I + + +P VHFPIDGVYEV+GVG+V+GGTV+RGSV VNQ L +GPDR+G ++ V+VRSIECKRQ VKEVG G SAT AVR+++RR LRR FRKGM+AI D P++ EF+ADVV+LHH TT+ GYQPVIHCGVVRQAAAI S+ GT + LRTG TA+V +F YYSEYM +G+TFLFREGRAKGIGK+ T
Sbjct: 1 MIGNVDSGKSTLIGVLCNRCTDDGRGSARSLVLKHRHEQENGRTSAVTTEIMGYTAEGDQVVPTSKKSHVARWAEVVQNSERNITLIDLCGHERYLKTTVFGLTGLMPDYCILVVGSNMGVQVMTKEHISIACALRIPLAVCVTKVDICPVPVLKQTRQTLAKYLRQNHKMPYPVKDEAQ---VETAASSIASDRITPVFAVSNVTGHGLDLLRLFVSKLRRQKMELSQEIA-LDPATVPAVHFPIDGVYEVKGVGLVIGGTVMRGSVTVNQNLQVGPDRSGQYVPVSVRSIECKRQPVKEVGLGVSATLAVRAISRRPNLRRQHFRKGMLAIGANDLPRSCWEFQADVVVLHHQTTIGVGYQPVIHCGVVRQAAAITSIDGTTTAN--LRTGATASVVLKFQYYSEYMEIGTTFLFREGRAKGIGKVTGTT 426
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: A0A7R9UAM3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAM3_9STRA) HSP 1 Score: 582 bits (1501), Expect = 4.930e-195 Identity = 301/437 (68.88%), Postives = 364/437 (83.30%), Query Frame = 3
Query: 564 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRNKARNDDPIMQIAESDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRVALRRSTFRKGMVAIDGQDDP--KATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRV 1868
D+R+AMIGNVDSGKSTLIGVL+S+GLDDGRG+ARSLVL+HRHEQ+NGRTSAVT+E+MGY +DG+QVV TAR H QRWA+VV +DRSVTLIDLCGHEKYLKTTVFGLTG+ PDFC++VVGANMGVQRMT+EHISIACAL IP+ V VTKIDI P VLKQTR+ LAK+LR+ KMPYP+K+ SQ V+AAA+S+ASDRITPVFA+S+V G GL LLR FV+++RR+ + I+ DLP +FPIDGVYEV+GVGIVVGGT++RGSV VN +L+GPDRAG ++ VTVRSIECKRQ+ + V GQ+ATFA+RS++RRVALRR+ FRKGM I D+ KA R+FEA VVILHHSTT+A GYQPVIHCG VRQAA ++S+ G ES LRTGQ V FRF+Y++E ++ GSTFLFREGRAKG+GK+ R+
Sbjct: 150 DVRVAMIGNVDSGKSTLIGVLTSAGLDDGRGSARSLVLKHRHEQDNGRTSAVTVEVMGY-RDGEQVVATARQHSQRWAQVVKEADRSVTLIDLCGHEKYLKTTVFGLTGMCPDFCIVVVGANMGVQRMTREHISIACALSIPLVVCVTKIDIAPQPVLKQTRRTLAKFLRACGKMPYPVKESSQ---VEAAAQSVASDRITPVFAISSVTGLGLPLLREFVSKIRRSFNLYRPAVPAISGQDLPEKYFPIDGVYEVKGVGIVVGGTMIRGSVSVNDTMLLGPDRAGAWLPVTVRSIECKRQATENVKTGQAATFAIRSLSRRVALRRAFFRKGMALIGELDNERVKAVRDFEASVVILHHSTTIATGYQPVIHCGTVRQAAQLVSVEGGES----LRTGQRDLVTFRFLYFTELILPGSTFLFREGRAKGLGKVTRL 578
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: A0A6V2X5T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2X5T2_HETAK) HSP 1 Score: 578 bits (1489), Expect = 1.100e-194 Identity = 298/435 (68.51%), Postives = 358/435 (82.30%), Query Frame = 3
Query: 564 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRNKARNDDPIMQIAESDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRVALRRSTFRKGMVAIDGQDDPKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRV 1868
D+R+AMIGNVDSGKSTLIGVL++ LDDGRGAARS VL+HRHEQENGRTSAV++E+MGY + +QVVPT R L+RWAEVV +S+RS+TLIDLCGHE+YLKTTVFGLTG++PDF ++VVG NMGVQ MT+EHISIA AL IP+AV VTK+DI P VLKQTRQ LAK+LR + K+PYP++D QA AAA+SI SDR+TPVFA+SNV G GL LLR F+++LRRNK + DP + + ES +P VHFPIDGVYEVRGVG+VVGGT+LRG V Q L +GPDR G F+ VTVR+IE KRQSV E EG SATFA+RS+N++V LRR+ FRKGMVAIDG D P+A R FEA VVILHHSTTV+ GYQPVIH GV+RQAAA+ + E ALRTGQ A VRFRF+Y++EY++ G+TFLFREGRAKG+GK+ RV
Sbjct: 56 DVRVAMIGNVDSGKSTLIGVLTNCTLDDGRGAARSSVLKHRHEQENGRTSAVSVEVMGYNEKNEQVVPTERQALKRWAEVVRNSERSLTLIDLCGHERYLKTTVFGLTGMLPDFTVVVVGGNMGVQLMTREHISIAAALAIPMAVAVTKVDIAPVPVLKQTRQTLAKFLRKHGKLPYPVRDADQAA---AAADSICSDRVTPVFAISNVTGQGLDLLRLFLSKLRRNKCKALDPEL-VDESLMPRVHFPIDGVYEVRGVGLVVGGTLLRGGVREGQTLQVGPDRTGAFVPVTVRTIEVKRQSVPEAKEGMSATFAIRSLNKKVTLRRTFFRKGMVAIDGGDTPRAVRSFEASVVILHHSTTVSHGYQPVIHAGVIRQAAAMDQIFAEE----ALRTGQRAEVRFRFLYFAEYLLPGATFLFREGRAKGLGKVTRV 482
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: W7TYD2_9STRA (Gtp-binding protein 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYD2_9STRA) HSP 1 Score: 555 bits (1429), Expect = 3.750e-184 Identity = 283/439 (64.46%), Postives = 352/439 (80.18%), Query Frame = 3
Query: 564 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRN----KARNDDPIMQIAESDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRVALRRSTFRKGMVAIDGQDDPKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRV 1868
D+R+AMIGNVD+GKSTLIGVL+++ LDDGRG+ARSLVL+HRHEQENGRTSAVT+E++GY G+QV+P R+ RW E+V S R+VTLIDLCGHE+YLKTT+FGLTGL+PDF LL+VG+NMGV MT+EHI+IACAL IP+AVV+TKIDI P VLKQTRQ LA+YLR N K+PYPIKD++Q V+AAA+S+ASDR+TPVFA+S+V G G+ LLRAFV+RLRR + P S+ P +H P+DGVYEV+GVG+VVGGTVLRG VV NQ+LL+GPDR G F+ ++VRSIEC+RQ VKE G S TFAVRS+N++V LRRS FRKGMV + +D P+ R+F A VVILHHSTT++ GY+PV+H G VRQAA + + G G EALRTG A V F F Y++E++V+GSTFLFREGRAKGIGK+ R+
Sbjct: 87 DVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQ---VEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCP--GGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILG---GEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRL 517
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: A0A7S3K4J1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J1_9STRA) HSP 1 Score: 526 bits (1356), Expect = 1.100e-173 Identity = 286/469 (60.98%), Postives = 343/469 (73.13%), Query Frame = 3
Query: 564 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRN-------------------KARNDDPI----------MQIAE-----SDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRVALRRSTFRKGMVAIDGQDDPKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRV 1868
DIR+AMIGNVDSGKS+LIGVL++ LDDGRG ARSLVL+H+HEQ NGRTSAVT+E+MG+ K+ Q+VPTAR H QRWAEVV SD+SVTLIDLCGHE+YLKTTVFGLT + PD+ LLVVGANMGVQRMTKEH++IACAL IPIAVV+TKID+CP VLKQTRQ LA+ LR +Q+MP P+KD +Q V AAESI + RI PVF+VSNV+G G+ LLR F++++RR + +DD I IA S LP H IDGVYEVRGVG++VGGTV RG + VN +L+GP+R G+FI V VRSIECKRQ +KE G +AT A+RS+NRR LRR RKGMV I +D PKATR FEA V ILHHSTTVA GY+PV+H VRQ A+LS+ SG LRTG A V FRF Y+ EY++ G+TFLFREGRAKGIGK+ ++
Sbjct: 89 DIRVAMIGNVDSGKSSLIGVLTNGSLDDGRGLARSLVLKHKHEQSNGRTSAVTVELMGF-KEEHQIVPTARHHSQRWAEVVAGSDKSVTLIDLCGHERYLKTTVFGLTAMYPDYALLVVGANMGVQRMTKEHVAIACALSIPIAVVITKIDMCPQPVLKQTRQTLARCLRQHQRMPLPVKDDAQ---VIVAAESIQNGRIAPVFSVSNVSGLGVPLLRNFLSKIRRAERPLTRSHTALEAPGVLPIRPASDDNICADHDQANAAQDIAALTPDYSSLPKTHLAIDGVYEVRGVGLIVGGTVTRGCISVNDTILLGPNRVGEFIPVLVRSIECKRQPIKEARPGMAATLAIRSLNRRNPLRRGYMRKGMVLIGEKDSPKATRAFEASVCILHHSTTVAEGYEPVVHAQTVRQTCALLSI---HSGDHVLRTGAKALVVFRFKYHFEYLLPGTTFLFREGRAKGIGKVIKI 550
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: F0Y7C9_AURAN (Tr-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7C9_AURAN) HSP 1 Score: 516 bits (1329), Expect = 9.750e-172 Identity = 270/433 (62.36%), Postives = 335/433 (77.37%), Query Frame = 3
Query: 564 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRNKARNDDPIMQIAESDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVNRRVA-LRRSTFRKGMVAIDGQDDPKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKI 1859
D+R+AMIGNVDSGKSTLIGVL++ GLDDGRG ARSLVLRH+HEQENGRTS V++E+MG+ + +QV+PTAR H QRW EVV+ DR+V+LIDLCGHE+YLKTTVFGLT ++PDF LLVVGANMGVQRMT+EHISIA AL +PIAVVVTK+DICPP VLKQTRQ LA+ LR + +MP P+K+ Q AAES + R+ PVFAVS+V G GL LL+ F+ L R A +P H IDGVYEVRGVG++VGGT+ RG++ V AL +GPDRAG F+ V+V+SIECKRQ + + G +AT A+R+++R+ LRR+ +RKGMV + D P+A+R F ADVVILHHSTTV GYQPV+HCGVVRQA A+L++ E+ LRTG A V FRFMY++EY+++G+TFLFREGRAKGIGKI
Sbjct: 4 DVRVAMIGNVDSGKSTLIGVLTAGGLDDGRGGARSLVLRHKHEQENGRTSTVSVELMGFQGE-RQVLPTARQHAQRWKEVVDACDRNVSLIDLCGHERYLKTTVFGLTAMLPDFALLVVGANMGVQRMTREHISIAVALSLPIAVVVTKVDICPPDVLKQTRQTLARCLRHHGRMPMPVKERDQLAN---AAESAGAGRVAPVFAVSSVKGDGLDLLKGFLGLLER------------APRPIPT-HLCIDGVYEVRGVGLIVGGTLTRGAIAVGDALWLGPDRAGAFVSVSVKSIECKRQPIDAIKPGVNATLALRALHRKAPPLRRAYYRKGMVLLGASDAPRASRRFSADVVILHHSTTVQEGYQPVVHCGVVRQACALLNICNKEN---LLRTGAKARVTFRFMYHTEYLLVGATFLFREGRAKGIGKI 416
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Match: A0A812UTX0_SYMMI (GTPBP1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTX0_SYMMI) HSP 1 Score: 504 bits (1297), Expect = 9.140e-167 Identity = 260/436 (59.63%), Postives = 338/436 (77.52%), Query Frame = 3
Query: 579 MIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGQQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRSNQKMPYPIKDISQAKQVDAAAESIASDRITPVFAVSNVNGTGLTLLRAFVARLRRNKAR-----NDDPIMQIAESDLPVVHFPIDGVYEVRGVGIVVGGTVLRGSVVVNQALLIGPDRAGDFIQVTVRSIECKRQSVKEVGEGQSATFAVRSVN-RRVALRRSTFRKGMVAIDGQDD--------PKATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAK 1844
M+GNVDSGKSTL+GVL+S+ LDDGRG ARSL+L+HRHEQ+NGRTSA T+EIMG+ KD QVVPTAR+H+QRW E+ S+R++TLIDLCGHEKYLKTT+FGLTGLMPDF L+VG+NMGVQ MT+EHISI+CAL +P+ V V+K+DICPP VL+ TR+ LAK LRS KMP+P+KD+ A AA +IAS+RITPVF +SNV G G+ LL+AF++RL+R+ R + DP ++ +S++P V+ +DGVYEV+GVGIVVGGTVLRG++ V Q L +GPD AG F + VRSIE +R + E GQSAT +V+S N ++ +RR+ FRKGMV ++G D P REF+A V+ILHHSTT++ GYQPVIHCGV+RQ+A I+ + G + + L+TG+ A VRFRF+Y++EY++ G TFLFREGRAK
Sbjct: 1 MVGNVDSGKSTLVGVLTSAALDDGRGCARSLILKHRHEQDNGRTSAATVEIMGF-KDNTQVVPTARNHIQRWVEINERSERTLTLIDLCGHEKYLKTTLFGLTGLMPDFAFLIVGSNMGVQMMTREHISISCALNLPMFVAVSKVDICPPNVLQNTRRTLAKILRSYGKMPHPVKDMDSAV---IAAAAIASNRITPVFTISNVTGQGVDLLKAFLSRLKRSPMRYAPWEDKDPEVKY-DSEIPSVYMSLDGVYEVKGVGIVVGGTVLRGTIRVGQVLYVGPDCAGSFYPIVVRSIESRRVPLGEAKTGQSATLSVKSTNPKKFTVRRAWFRKGMVVVNGVDSRPKGVDMVPIGVREFDASVMILHHSTTISCGYQPVIHCGVLRQSAGIVDIQGDD---KRLKTGERAVVRFRFLYFAEYIIPGDTFLFREGRAK 428 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.870.1 >prot_C-linearis_contig104.870.1 ID=prot_C-linearis_contig104.870.1|Name=mRNA_C-linearis_contig104.870.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=531bp MATFSNLTSLGDHVEKDDGRSQATGAHKAVDSSAGGDARLRGPATAADPLback to top mRNA from alignment at C-linearis_contig104:84676..102201+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig104.870.1 ID=mRNA_C-linearis_contig104.870.1|Name=mRNA_C-linearis_contig104.870.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=17526bp|location=Sequence derived from alignment at C-linearis_contig104:84676..102201+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig104:84676..102201+ >mRNA_C-linearis_contig104.870.1 ID=mRNA_C-linearis_contig104.870.1|Name=mRNA_C-linearis_contig104.870.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3186bp|location=Sequence derived from alignment at C-linearis_contig104:84676..102201+ (Chordaria linearis ClinC8C monoicous)back to top |