prot_C-linearis_contig104.869.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.869.1
Unique Nameprot_C-linearis_contig104.869.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length974
Homology
BLAST of mRNA_C-linearis_contig104.869.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI)

HSP 1 Score: 963 bits (2489), Expect = 0.000e+0
Identity = 648/991 (65.39%), Postives = 716/991 (72.25%), Query Frame = 0
Query:    1 MSSAGSFVHGSSAGGEDDRKKSKEEQDIANFLSSIDDMTSSSLGEVNLHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGMHGDVSELSAIADAFPADWLQGMEGLGM-VGDQSDSSAPPQAEQTQQLPXXXXXXXXXXXXXXXXXXXPRPVAKEHS--NNREPEILGEEPEILDDVEGGYDSGR-----LMSAGGRVASWATRTPASLVGAATAAFRGDARHTAGSPSATTAADAAATATTAGADEPPLDWPGTLDMLGMTQAEAEYGGNPTAAAAAAPASELPSMPPPAAREETFPDFVEIRDPRNVSQFPKPDNALVAKVAAGGRNGGDGQAGEXXXXXXXXXXXXXXXXXXXXQRQVLPAPLRTVEVYLRPDVTWESVADVYMAVMLSRGLVVRQQTEKTVTAEKSADAPGDWSTVKLTVGVTRDKLRTLVIQFYADSR--APMLSFAGTMARFSGRAGDELYTALRDALVERRMPLSFLATDAEGVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERSARLAATLLPQYQANGLEPPRPMRSKPLSAYPLTTRRPPVSSCGVEEAREVMERAREHAYVAGTAGTAGSTLQKRTDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGSGSMVVAEGIRSLIRSTWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAVLRDGAGGPGASGTPVGRDFAARFRLMAKEAVLCYCKAVHAKRVGQLYLTCNHLCFHSSVLGFTSQRVLPLLTVASVSHAPSVLGMDLVTLVDRGREEHSFGIPAVEAGFPQRFRDLLNQCLVLCKADASRRAAEREGAAATDKKPDEEQILARVQRLAKAKQLREARGAXXXXXXXXXXXXXXXXPPVQPVLSPAAGVSVEKEGAVGPDQM------CGVSGGGEGIVEVGGGGAMGMGGEAAGRRNEGGRVGPXXXXXXXXXXXXA--NPGSMMAMGIQAFLEESQKR 973
            M+SAGSFVHG+ A  E+  ++SKEEQDIA+F+SSIDD  S      ++                                  + +  D     AIADAFPADWL   EG+G+ V  ++DSSA       Q +       XXXXXXXXXXXXX     ++ +  NN   E+LGEEP+ILD+V+ GY SG      LMSAGGR+ SWA  TPASLV AAT AFRGDA H     +     + +A A +  ADE PLDW GTLDM+GM +AE +  G  T+A A AP SELPS+PPPAARE  FPDFVEIRDPRNVSQFPKPDNALVAK AAGG  GGDGQAG+  X                 QR VLPAPLRTVEVYLRPDVTWESV+DVYM VMLSRGLVVR QTEK VTAEKSADAPGDW+TVKLTVGVTRDKLRTLVIQFYAD+R  AP+LS AGT+ARFSGR GD+LYTA+R+ LVER+MPLSFLATDAE VSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEER ARL ATLLPQY+A GL PPRP RSKPLSAYPLTTRRPPVS+CGVEEAREVMERAREH  V G     G +   +               XXXXXXXXXX        GSGS    VAEGIRSLIR+TWEDVK+WCDEEAEARVRRKDAQVRDRLLAVE HREAL+A LRDGAGG  AS TP GR+FAARFR MAKEAVLC CKAVHAKRVGQLYLTCNH+CFHSSVLGFTSQRVLPLLTVA++SHA SVLGMDL+TLVDRG +EHSFGI AVEAGFP+RF DLL QCLVLCKADASRRAA+REGAAA++++PDEEQILARVQRLAKAKQLR     XXXXXXXXXXXXXXXX      ++P A     + G   P++        G S GG G+VE G GGAM                  XXXXXXXXXXXX     GSMMAMGIQAFLEESQKR
Sbjct:    1 MASAGSFVHGTGAS-EERVRQSKEEQDIADFMSSIDDTASGGSTTTSVLRGGRSSVGKGGDIFLGSLSPPALQQVTGTSAAGELLADDGK---AIADAFPADWLNDFEGIGLGVQGKTDSSAASATATAQPIHSSPQGQXXXXXXXXXXXXXXXXQHRDATIQNNETGEVLGEEPQILDNVDEGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNAGGDLGNGSAAAASTDADELPLDWQGTLDMVGMAEAETDTKG--TSALAVAPVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGG--GGDGQAGQGAXESGEHAAAAGQERG---QRHVLPAPLRTVEVYLRPDVTWESVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQAPILSLAGTIARFSGRTGDDLYTAIRNVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREH--VRG----GGDSFPPQKGVDVDDENVFASGGXXXXXXXXXXDEGRGAKVGSGSS---VAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAARFRPMAKEAVLCQCKAVHAKRVGQLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDLLTLVDRGGQEHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAASEREPDEEQILARVQRLAKAKQLRXXXXXXXXXXXXXXXXXXXXXXXXD--MAPPAASPHSRPGYPRPEESEFAERDTGASVGG-GVVEGGAGGAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGSMMAMGIQAFLEESQKR 968          
BLAST of mRNA_C-linearis_contig104.869.1 vs. uniprot
Match: A0A7S2F8A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8A2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.390e-5
Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 0
Query:  648 LIRSTWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAVLRDGAGGPGASGTPVGRDFAARFRLMAKEAVLCYCKAVHAK-----RVGQLYLTCNHLCFHS--SVLGFTSQRVLPLLTVASVSHA 771
            ++R+ W  +   C+EEA AR+ RK   V  RL A+E +R A+V+ L + +         V R F  RFR+ A EA+L  C AV  +     R G++Y+T  HL F     +L   +Q  +P  T+  +  A
Sbjct:   69 VVRALWRLLGSKCEEEARARMARKQKVVTQRLQAIEGYRSAVVSKLANRSQQNRTELIGVERAFRGRFRV-ADEALLVDCAAVVTEADGKQRKGRVYVTMGHLWFDDPGGLLTSPTQTPIPFYTIHEIGKA 198          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIQ7_ECTSI0.000e+065.39GRAM domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2F8A2_9STRA6.390e-533.59Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainPFAMPF02893GRAMcoord: 711..771
e-value: 1.1E-5
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:79265..84496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.869.1mRNA_C-linearis_contig104.869.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 79265..84496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.869.1 ID=prot_C-linearis_contig104.869.1|Name=mRNA_C-linearis_contig104.869.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=974bp
MSSAGSFVHGSSAGGEDDRKKSKEEQDIANFLSSIDDMTSSSLGEVNLHG
GGRSSGGGGRDVFLGSTTPPTQQQQQQQQQQQQGMHGDVSELSAIADAFP
ADWLQGMEGLGMVGDQSDSSAPPQAEQTQQLPTTPPPQNAQRNQQQGGQQ
QPRPVAKEHSNNREPEILGEEPEILDDVEGGYDSGRLMSAGGRVASWATR
TPASLVGAATAAFRGDARHTAGSPSATTAADAAATATTAGADEPPLDWPG
TLDMLGMTQAEAEYGGNPTAAAAAAPASELPSMPPPAAREETFPDFVEIR
DPRNVSQFPKPDNALVAKVAAGGRNGGDGQAGEGDSGGGGGAVAGQGVGQ
GRGQRQVLPAPLRTVEVYLRPDVTWESVADVYMAVMLSRGLVVRQQTEKT
VTAEKSADAPGDWSTVKLTVGVTRDKLRTLVIQFYADSRAPMLSFAGTMA
RFSGRAGDELYTALRDALVERRMPLSFLATDAEGVSLDPHYVRDLVGMYA
HENVVNLTRYALPLEEFVRQEEERSARLAATLLPQYQANGLEPPRPMRSK
PLSAYPLTTRRPPVSSCGVEEAREVMERAREHAYVAGTAGTAGSTLQKRT
DEEEDENVFAASGGGDEEGDHSSGGGAEAAAAGSGSGSMVVAEGIRSLIR
STWEDVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVAVLRDGAGGP
GASGTPVGRDFAARFRLMAKEAVLCYCKAVHAKRVGQLYLTCNHLCFHSS
VLGFTSQRVLPLLTVASVSHAPSVLGMDLVTLVDRGREEHSFGIPAVEAG
FPQRFRDLLNQCLVLCKADASRRAAEREGAAATDKKPDEEQILARVQRLA
KAKQLREARGAAAAASATTASTTTAAAPPVQPVLSPAAGVSVEKEGAVGP
DQMCGVSGGGEGIVEVGGGGAMGMGGEAAGRRNEGGRVGPGERSGAAGRG
GGANPGSMMAMGIQAFLEESQKR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM