prot_C-linearis_contig104.866.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.866.1
Unique Nameprot_C-linearis_contig104.866.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length367
Homology
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: A0A6H5JMC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC6_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 5.680e-71
Identity = 180/454 (39.65%), Postives = 224/454 (49.34%), Query Frame = 0
Query:   22 IEAQLRSLEFPNLEDGTGVYGKKTWDNAIKMVLAVEGFTRGFEIRIENKTKLMTKQSAESSGKKNRWACVWIICLHS----GKPRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRVAEGEICLTHDTPTSGGKEHARPKTFDNEMTSED-----------VEEMSGFINELTDAGVKTADLHKALQQR------SGKRLG-----------------------------------NG-----GKSKVRTIIDR-----------------------HNFTSGATISQRWRESET--------------------------PWPMAALAAK--PARLSAGAAESVGLPPTFSQPPGADPTSIVSPAPGANVPAYAYANGVALGKELGGMLKEITSLAGIQRSMETIKNLARQQIDVEVRSQRDQSTTRVFRGIFSQPADGLPPGGGGG 363
            IE Q+R L FPNLEDGTG YG+KT ++A++MV AV GFTRGFE+   +K++   +Q                +C+      G+PR R  VANE   ++T + K  CKFK VLWW A+S+ P VA+G +CLTH TP+S GKEHARP+T  NEM+ ED           VE MS  +  L        DL++AL  +        KR G                                   N      G+ + R ++D                         N  +   +S     SE                           P  + AL A+  PA L+AGAA S GLP    QPP ADP S VS + G NVP YAYANGVALGKELGGM KEI +LAGI R+METIK  AR Q+DVE RSQ + ST RVFRG+FSQPA+ LP G  GG
Sbjct:  135 IEKQVRELIFPNLEDGTGEYGEKTLNSAVEMVKAVPGFTRGFEVTRVSKSRGEAQQME--------------LCVDHLRPPGEPRRRERVANEKDGKKTSSSKLGCKFKTVLWWSAKSDAPVVAQGGMCLTHHTPSSDGKEHARPRTCGNEMSREDIHTLGICSTQRVESMSSAVKRLVTRAGTMVDLNQALMGKVQDDANKSKRCGLLRHFSFVVDAMKDERCSTHAIEDTEAQVVAALGYNATCLVRGEDEARRLLDELAADPAKAKLCYDTSSGEDLLRDQNVNAVVRVSMIAPPSELGHLVALGPDGFFLCTCLRQLVYGLLCPHGLKALWAEGVPASLTAGAAASAGLPAGVGQPPRADPNSTVSRS-GPNVPTYAYANGVALGKELGGMFKEINNLAGIHRAMETIKLFARAQVDVEKRSQDEHSTNRVFRGVFSQPAEDLPSGDAGG 573          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: A0A6H5JCQ6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCQ6_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.090e-53
Identity = 88/145 (60.69%), Postives = 108/145 (74.48%), Query Frame = 0
Query:   81 SSGKKNRWACVWIICLHSGKPRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRVAEGEICLTHDTPTSGGKEHARPKTFDNEMTSEDVEEMSGFINELTDAGVKTADLHKALQQRSGKRLGNGGKSKVRTIIDRHNFTS 225
            S GK NRW CVWI C+H G+PR R  VANE  R+ T + K  C FK VLWW A S+ P VA+G +CLTH TP+S  KEHARP+TFDNEM+ ED+E+MS FI +L DAGVKT DLHK +QQ+SGKRLG  GK+ VR++++RH   S
Sbjct:   65 SRGKLNRWICVWITCVHHGEPRRRERVANEEDRKNTSSSKLGCNFKTVLWWSANSDAPVVAQGGMCLTHHTPSSDEKEHARPRTFDNEMSREDMEQMSDFIIDLADAGVKTVDLHKTVQQKSGKRLGVEGKAVVRSVVERHRKAS 209          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.640e-46
Identity = 96/215 (44.65%), Postives = 141/215 (65.58%), Query Frame = 0
Query:    8 SSPAGAI-PIAEKEV--IEAQLRSLEFPNLEDGTGV-YGKKTWDNAIKMVLAVEGFTRGFEIRIENKTKLMTKQSAESSGKKNRWACVWIICLHSGKPRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRVAEGEICLTHDTPTSGGKEHARPKTFDNEMTSEDVEEMSGFINELTDAGVKTADLHKALQQRSGKRLGNGGKSKVRTII 218
            +SP GAI P + +++  ++ ++ +L FPNLE G+   +G+ T +NA+ M+ A  G  RG+ ++  NKTKL T++     G++NRW  V I+C  +G PR R  VAN + RR T ++K  C F++ LWW A S  P VA+G++CLTH T TSGGKEH RP+  +NEM+  ++E    F+ EL  + VKT ++HK L+ R GKRLG  GK KVRT++
Sbjct:   73 ASPRGAILPTSPEDLATLQGEVENLLFPNLEQGSQQQFGEATIENAVGMLKAKIG--RGYPLQRHNKTKLYTRKQEAEHGRRNRWNYVEIVCPQAGSPRARERVANASARRNTSSEKIGCAFEVGLWWAANSPAPIVAKGKLCLTHHTKTSGGKEHERPRAIENEMSVAEIEAKRDFLRELHASRVKTTEIHKTLE-RVGKRLGQAGKQKVRTMM 284          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: A0A6H5JTT1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT1_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.610e-45
Identity = 95/236 (40.25%), Postives = 144/236 (61.02%), Query Frame = 0
Query:    8 SSPAGAIPI----AEKEVIEA--QLRSLEFPNLEDGTGVYGKKTWDNAIKMVLAVEGFTRGFEIRIENKTKLMTKQSAESSGKKNRWACVWIICLHSGKPRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRVAEGEICLTHDTPTSGGKEHARPKTFDNEMTSEDVEEMSGFINELTDAGVKTADLHKALQQRSGKRLGNGGKSKVRTII-----DRHNFTSGATISQR 232
            S PAGA P     + KE+++   +L  L FPNLEDG+G YG KTW  A +M    E    G+ +++  K+KL TK S  +SG++NR+ CV I C+HSG+PR   + A+ + R++T  +KF CK+ + L+W A S+ P + + ++CL H    S G EH  P+  DNEMT ED+E  S  I ++ + G+KTA+++K LQ+ +GKRLG+ GK  +R +      D+ N   G   +Q+
Sbjct:   98 SPPAGAAPAVCARSAKEILKLHERLNGLVFPNLEDGSGEYGDKTWRKAFEM--GEEAVGCGYALQMNKKSKLFTKASKSTSGRRNRYNCVQIKCIHSGQPRETAITADVHARKKTSNKKFGCKWGLSLYWGANSDAPSLGK-DVCLRHTYQGSEGIEHDPPRVIDNEMTREDLEAESANIKKMHEKGIKTAEIYKYLQE-TGKRLGDKGKQMLRLMRAQFDKDKQNSRGGLNDAQQ 329          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: D8LJH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH3_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 1.930e-43
Identity = 145/410 (35.37%), Postives = 191/410 (46.59%), Query Frame = 0
Query:   16 IAEKEVIEAQLRSLEFPNLEDGTGVYGKKTWDNAIKMVLAVEGFTRGFEIRIENKTK--------------LMTKQSAESSGKKNRWACV----------WIICLHSGKPRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRVAEGEIC---------------LTHDTPTSGGKEHARPKTFDNEMTSEDVEEMSG---FINELTDAGVKTA----DLHKALQQRSGKRLGNGG-------KSKVRTIIDRHNFTS----------GATISQRWRESETPWPMAALAAKPARLSAGAAESVGLPPTFSQPPGADPTSIVSPAPGANVPAYAYANGVALGKELGGMLKEITSLAGIQRSMETIKNLARQQIDVEVRSQRDQSTTRVFRGIFSQPADGLPPGGGG 362
            + E   +E +++ LEFPNLEDGTG +G+KT DNA+ M++A  G  RGF ++ ENKTK              + T Q A+   K+                ++    +   RT   V N     Q      +     +L   +   +P V + E                 LT+DT   G  E   P    +E     +   +    F   L D  V T      +  A +      LG  G       +  V  ++  H   +          GATIS RWR+SETPW MAALAAKPA+LS GAA          Q P  D + IVS   G N+ AYAYANGVALGKELGGM KE+ S+A IQR ME++K  A+QQI+VE RS RD+ST+RVF G   +P   LP G  G
Sbjct:   65 LGEIATLEEEIKKLEFPNLEDGTGNFGEKTMDNAVAMLMAKTG--RGFSLKRENKTKVGCEFHLGLWWGADMNTPQVAKPESKRRNLGGTVARVAVQEHSYVESFRTKHLRTFNFVLNAVKYEQCSQHATEDTEAQILGALSYEAIPVVRDEEAARRLFEELVADPTKANLTYDT---GSGELVDPSIPTSEAACVSMVSRTSVPHFAELLRDQNVHTVVRITPMSTASECGHLVALGPDGFFLCTCLRQLVYGLLCPHAIKALWYQRASQFNGATISPRWRDSETPWTMAALAAKPAKLSTGAAGLXXXXXXXXQMPPVDTSPIVSSHSGLNLSAYAYANGVALGKELGGMFKEVPSVASIQRLMESMKLHAKQQIEVEKRSLRDESTSRVFTGTLPRPTPALPQGDAG 469          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: A0A6H5JB23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB23_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.190e-42
Identity = 95/205 (46.34%), Postives = 115/205 (56.10%), Query Frame = 0
Query:   25 QLRSLEFPNLEDGTGVYGKKTWDNAIKMVLAVEGFTRGFEIRIENKTKLMTKQSAESSGKKNRWACVWIICLHSGKPRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRV--------AEGEICLTHDTPTSGGKEHARPKTFDNEMTSEDVEEMSGFINELTDAGVKTADLHKALQQRSGKRLGNGGKSKVRTIIDRH 221
            Q+R L FPNLEDGTG YG+KT + A++MV AV GFTRGFE+         T+ S    G                                       C FK VLWW AR + P V        AEG +CLTH TPTS GKEHA P TFDNEM+ +D+ EMS FI +L D+GVKT DLHK +QQ+SGKRLG  GK+ VR I+++H
Sbjct:   42 QVRELVFPNLEDGTGEYGEKTLNKAVEMVKAVPGFTRGFEV---------TRVSKSRVG---------------------------------------CNFKTVLWWGARQDAPVVGKASLSALAEGGMCLTHHTPTSNGKEHAPPTTFDNEMSRQDIYEMSDFIIDLADSGVKTVDLHKTVQQKSGKRLGREGKALVRCIVEKH 198          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: D8LKQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ9_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 8.340e-42
Identity = 119/294 (40.48%), Postives = 158/294 (53.74%), Query Frame = 0
Query:   48 NAIKMVLAVEGFTRGFEIRIENKTKLMTKQSAES-SGKKNRWACVWIICLHSGKPRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRVAEGEICLTHDTPTSGGKEHARPKTFDNE--MTSEDVEEMSGFINELTDAGVKTADLHKALQQRSGKRLGNGGKSKVRTIIDRHNFTSGATISQRWRESETPWPMAALAAKPARLSAGAAESVGLPPTFSQPPGADPTSIVSPAPG-ANVPAYAYAN--GVALGKELGGMLKEITSLAGIQRSMETIKNLARQQIDVEVRS 335
            NA+KM++A  G  RGF ++ ENKTKL TK++ E  S ++NRW+ V I C H GKPR R  V + + R  ++++K                        +CL H TPTSGGKEH RP+ FDN   + +ED+EE S  I  L  + V T ++HKAL    GK+LG  GK KVR++  RH F +G T                  AKP R S   A + G P     PP  DP  I  P  G  +V AY YA+  GVALG+ELG M  ++TS+A +QR +E  KN A   ++ E RS
Sbjct:    3 NAVKMLMAKTG--RGFRLKRENKTKLWTKKNEEEDSRRRNRWSYVSIKCCHGGKPRKRPRVEDASARCNSKSRK----------------------ANLCLAHHTPTSGGKEHERPRAFDNGNGVCAEDIEEESDLIRRLHFSNVTTKEIHKALAD-IGKKLGPAGKQKVRSM--RHTFDAGLT------------------AKPPRRSTRGA-AAGHPGQV--PPVDDPNPIALPHAGPTSVSAYEYAHDGGVALGEELGAMFAQLTSVAAVQRVIENTKNFAEHLLEAEKRS 248          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: A0A6H5JGY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY2_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 9.130e-41
Identity = 92/139 (66.19%), Postives = 104/139 (74.82%), Query Frame = 0
Query:  225 SGATISQRWRESETPWPMAALAAKPARLSAGAAESVGLPPTFSQPPGADPTSIVSPAPGANVPAYAYANGVALGKELGGMLKEITSLAGIQRSMETIKNLARQQIDVEVRSQRDQSTTRVFRGIFSQPADGLPPGGGGG 363
            +GA IS RWRESETPW MA LAAKPA LSA AA S GLP    QPP  DP S VS + G NVP+Y YANGVALGK+LGGM KEI +LAGI R+METIK  AR Q+D++ RSQ   ST RVFRG+FSQPA+ +P G  GG
Sbjct:  898 NGAIISPRWRESETPWLMAELAAKPASLSARAATSAGLPAGVGQPPRVDPNSTVSRS-GPNVPSYTYANGVALGKKLGGMFKEINNLAGIHRAMETIKLFARGQVDLDKRSQEKHSTNRVFRGVFSQPAEDVPSGDAGG 1035          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: A0A6H5JBZ4_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ4_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.070e-38
Identity = 89/230 (38.70%), Postives = 131/230 (56.96%), Query Frame = 0
Query:   22 IEAQLRSLEFPNLEDGTGVYGKKTWDNAIKMVLAVEGFTRGFEIRIENKTKLMTKQSAESSGKKNRWACVWIICLHSGKPRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRVAEGEICLTHDTPTSGGKEHARPKTFDNEMTSEDVEEMSGFINELTDAGVKTADLHKALQQRSGKRLGNGGKSKVRTIIDRHNFTSGATISQRWRESETPWPMAALAAKPAR 251
            +  +L  L FPNLEDG+G YG KTW    +MV    G   G+ +++  K+KL TK S  +SG++NR+ CV I C+HSG+PR     A+ + R++T T+KF CK+ + L+W A S+ P + + ++CL H    S G EH  P+  +NEMT ED+E  S  + ++ + GVKTA++++ LQ+ +GKRLG     K            G     RW E     P  AL A+  R
Sbjct:  118 LHERLNGLVFPNLEDGSGEYGDKTWRKGFEMVEEAVGC--GYALQMNKKSKLFTKASESTSGRRNRYNCVQIKCIHSGQPRETAKTADVHARKKTSTKKFGCKWGLSLYWGANSDAPSLGK-DVCLRHTYQGSEGIEHDPPRVIENEMTREDLEAESANMKKMHEKGVKTAEIYEYLQE-TGKRLGG---RKTDAASHEGAVRQGQAEQPRWFERR---PAVALPARGGR 337          
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Match: A0A6H5K8B6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8B6_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 2.440e-35
Identity = 81/123 (65.85%), Postives = 90/123 (73.17%), Query Frame = 0
Query:  218 IDRHNFTSGATISQRWRESETPWPMAALAAKPARLSAGAAESVGLPPTFSQPPGADPTSIVSPAPGANVPAYAYANGVALGKELGGMLKEITSLAGIQRSMETIKNLARQQIDVEVRSQRDQS 340
            +DR N   GATIS RWRESETPW MA LAAKP  LSAG A S G P   SQPP  DP S  S + G NVP+YAYANGVALGKELGGM KEI SLAGI R++E+IK  AR Q+DVE RS+ + S
Sbjct:    6 VDRFN---GATISPRWRESETPWLMADLAAKPVTLSAGLAASAGPPVAVSQPPRVDPNSTASRS-GPNVPSYAYANGVALGKELGGMFKEIHSLAGINRAIESIKFFARGQVDVEKRSEEELS 124          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMC6_9PHAE5.680e-7139.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCQ6_9PHAE1.090e-5360.69Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JXK5_9PHAE1.640e-4644.65SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JTT1_9PHAE2.610e-4540.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJH3_ECTSI1.930e-4335.37Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JB23_9PHAE1.190e-4246.34MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKQ9_ECTSI8.340e-4240.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGY2_9PHAE9.130e-4166.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JBZ4_9PHAE1.070e-3838.70MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K8B6_9PHAE2.440e-3565.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:69699..72786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.866.1mRNA_C-linearis_contig104.866.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 69699..73286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.866.1 ID=prot_C-linearis_contig104.866.1|Name=mRNA_C-linearis_contig104.866.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=367bp
MSKRTKRSSPAGAIPIAEKEVIEAQLRSLEFPNLEDGTGVYGKKTWDNAI
KMVLAVEGFTRGFEIRIENKTKLMTKQSAESSGKKNRWACVWIICLHSGK
PRTRLLVANENVRRQTQTQKFQCKFKMVLWWPARSNVPRVAEGEICLTHD
TPTSGGKEHARPKTFDNEMTSEDVEEMSGFINELTDAGVKTADLHKALQQ
RSGKRLGNGGKSKVRTIIDRHNFTSGATISQRWRESETPWPMAALAAKPA
RLSAGAAESVGLPPTFSQPPGADPTSIVSPAPGANVPAYAYANGVALGKE
LGGMLKEITSLAGIQRSMETIKNLARQQIDVEVRSQRDQSTTRVFRGIFS
QPADGLPPGGGGGADTA
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