prot_C-linearis_contig104.864.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.864.1
Unique Nameprot_C-linearis_contig104.864.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length667
Homology
BLAST of mRNA_C-linearis_contig104.864.1 vs. uniprot
Match: A0A6H5JCK4_9PHAE (Telo_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK4_9PHAE)

HSP 1 Score: 650 bits (1677), Expect = 1.570e-220
Identity = 428/702 (60.97%), Postives = 483/702 (68.80%), Query Frame = 0
Query:    1 MVGDIIRLHRAKVQEYRGRPQLLAVGGTAWVVIRKKQAVRETFQKFPIGSAATSXXXXXXXXXXXXXXXXXXXSPPSGPDAGGGEVDAVLPSSEWEVQASSANYTMSQVDQDRCNALNDWLVNKSPHLWLKPSSEVKVWVKDVFRRPQTGPAVSEAEVDLVCCLTSKHEKARGGAGSMSEVYVADGTGFATSMPGSAWDGRRDAALLKGMRAALGKPGWSPGDPRPPPFPAQLKVEVLENTKEWEALALSPGMWVRLRRLTITKNRQTGNMSAKMKDKGSCINPLHPGMAGVQHIAMSYATHCASAGGAKXXXXXXXXXXXXXXG------------ARIPSVPPGPXXXXXXXXXXXXXXXXXXXXXXXXPSARQPAASLGAPPSXXXXGSSTALGSLV----PGRAAANAGG-GRETGASGAASTAATRRVEGAVPRNAPTPQPAAPRSGXXXXXXXXXXAS------------PAARGGGLSG------------DVVASSRRVAHGCGGAGAEAGGGESARGTKRPLPGSEG---SGAGAERGRESAAPGGGPVSNLGVVRSTTAPQVFDTRARIVSHWPPKVKDFVRKGP-GWSDGTHYLFTLKLEDDYGVVEAVAAGPEAVRLLPGCPPPAEFLASPDVRARVERVLAGLESAGADGADGCLVDLRLRSYLAPLVGIGQRGEKCKRYSIIAPSCLD 657
            MVGDI+RLHRAKVQEYRGRPQLLA GG AW+VIRKK+A+RET+QK PIG  + S   XXXXXXXXXXXXXXXXSPPSGPDAGGGEVDA+LP+++WEVQ+SSANYT+SQVDQDRC AL+DWL  KSP LWLK SSEVKVWV+D+FRRPQ+G  +S+ EVDLVCCLTSKHEKA GGAGS+SEVYVADGTGFA+SMPG  WD RRDAALLKG+RAALGKPGWSPG+PRPPP PA LKVEV EN +EWEALALSPGMW+RLRRLTI KNR TGNMSAKM DKGS +NPLHP M  VQHIAMSYATHCASA  + XXXXXXXXXXXXXX             A  P  PP                          PS R   AS G    XXXX              PG +A++A   G  +G        ++ RV G   R+ P+   AA    XX        A             P  R  G+ G            DV+ +S     G GG GAE GG  S RGTKR LP SE    + AGAER  E  AP G  +SNL VVRST AP VFDTRARIVSHWPPKV+DFVR+GP   +D  H+LFTL+LEDDYGVV+A+A+GP+A  LLPG P P EF  S +V++RVERVL  LES  A  A G L++LRLRSYLAPLV I  RG+KCKRYSIIAPSCL+
Sbjct:  282 MVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQKCPIGGIS-SASGXXXXXXXXXXXXXXXXSPPSGPDAGGGEVDAILPATDWEVQSSSANYTLSQVDQDRCIALSDWLARKSPQLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRAALGKPGWSPGNPRPPPIPAHLKVEVTENKREWEALALSPGMWIRLRRLTIVKNRATGNMSAKMIDKGSSVNPLHPSMVEVQHIAMSYATHCASASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXKAPSPVRPPS-------RSAPAPATATAGVCSRQMPSPRGNGASSGNXXXXXXXXXXXXXXXXXXXGDPGVSASSAAASGPSSGCDNRGRATSSSRVTGCERRSLPSSPTAAXXXXXXPRKVPTSSAQQLAPLLRRQQQGPPLRPAGVRGRCHFFDRGDASKDVLGTSN-ARTGVGGEGAEVGGHVSVRGTKRALPVSEDRTETRAGAERRPE--APEGRRMSNLEVVRSTVAPNVFDTRARIVSHWPPKVEDFVRRGPESDNDRLHFLFTLRLEDDYGVVDAIASGPDASLLLPGSPSPTEFYTSLEVQSRVERVLTRLESTSAGKAGGGLIELRLRSYLAPLVEIRHRGDKCKRYSIIAPSCLE 972          
BLAST of mRNA_C-linearis_contig104.864.1 vs. uniprot
Match: D7FIQ5_ECTSI (POT1 protection of telomeres 1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ5_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 6.230e-124
Identity = 271/659 (41.12%), Postives = 307/659 (46.59%), Query Frame = 0
Query:    1 MVGDIIRLHRAKVQEYRGRPQLLAVGGTAWVVIRKKQAVRETFQKFPIGSAATSXXXXXXXXXXXXXXXXXXXSPPSGPDAGGGEVDAVLPSSEWEVQASSANYTMSQVDQDRCNALNDWLVNKSPHLWLKPSSEVKVWVKDVFRRPQTGPAVSEAEVDLVCCLTSKHEKARGGAGSMSEVYVADGTGFATSMPGSAWDGRRDAALLKGMRAALGKPGWSPGDPRPPPFPAQLKVEVLENTKEWEALALSPGMWVRLRRLTITKNRQTGNMSAKMKDKGSCINPLHPGMAGVQHIAMSYATHCASAGGAKXXXXXXXXXXXXXXGARIPSVPPGPXXXXXXXXXXXXXXXXXXXXXXXXPSARQPAASLGAPPSXXXXGSSTALGSLVPGRAAANAGGGRETGASGAASTAATRRVEGAVPRNAPTPQPAAPRSGXXXXXXXXXXASPAARGGGLSGDVVASSRRVAHGCGGAGAEAGGGESARGTKRPLPGSEGSGAGAERGRESAAPGGGPVSNLGVVRSTTAPQVFDTRARIVSHWPPKVKDFVRKGPGWSDG--THYLFTLKLEDDYGVVEAVAAGPEAVRLLPGCPPPAEFLASPDVRARVERVLAGLESAGADGADGCLVDLRLRSYLAPLVGIGQRGEKCKRYSIIAPSCLD 657
            MVGDI+RLHRAKVQEYRGRPQLLA GG AW+VIRKK+A+RET+QK PIG  + +   XXXXXXXXXXXXXXX SPPSGPDAGGGE DAVLP+++WEVQ+SSANYT+SQVDQDRC AL+DWL  KSPHLWLK SSEVKVWV+D+FRRPQ+G  +S+ EVDLVCCLTSKHEKA GGAGS+SEVYVADGTGFA+SMPG  WD RRDAALLKG+R ALGKPGWSPG+PRPPP PA LKVEV EN +E                                                                                                                                                                                                                                                                                                           V+DFVR GP  SD    H+LFTL+LEDDYGVV+A+A+GP+A  LLPG P PAEF  S +VR+RVERVL  LES     A G +V+LRLRSYLAPLV I  RG+KCKRYSIIAPSCL+
Sbjct:  297 MVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQKCPIGGISPASGDXXXXXXXXXXXXXXX-SPPSGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDWLATKSPHLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRTALGKPGWSPGNPRPPPIPAHLKVEVTENKRE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEDFVRHGPE-SDNYRLHFLFTLRLEDDYGVVDAIASGPDASLLLPGSPSPAEFYTSLEVRSRVERVLTRLESTSTGKARGGVVELRLRSYLAPLVEIRHRGDKCKRYSIIAPSCLE 654          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCK4_9PHAE1.570e-22060.97Telo_bind domain-containing protein n=1 Tax=Ectoca... [more]
D7FIQ5_ECTSI6.230e-12441.12POT1 protection of telomeres 1 homolog n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028389Protection of telomeres protein 1PANTHERPTHR14513PROTECTION OF TELOMERES 1coord: 2..267
coord: 526..611
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:56632..60765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.864.1mRNA_C-linearis_contig104.864.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 56594..61431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.864.1 ID=prot_C-linearis_contig104.864.1|Name=mRNA_C-linearis_contig104.864.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=667bp
MVGDIIRLHRAKVQEYRGRPQLLAVGGTAWVVIRKKQAVRETFQKFPIGS
AATSTATSSGGGVDDEDPDPDDDSPPSGPDAGGGEVDAVLPSSEWEVQAS
SANYTMSQVDQDRCNALNDWLVNKSPHLWLKPSSEVKVWVKDVFRRPQTG
PAVSEAEVDLVCCLTSKHEKARGGAGSMSEVYVADGTGFATSMPGSAWDG
RRDAALLKGMRAALGKPGWSPGDPRPPPFPAQLKVEVLENTKEWEALALS
PGMWVRLRRLTITKNRQTGNMSAKMKDKGSCINPLHPGMAGVQHIAMSYA
THCASAGGAKAGSAQDGNAGSGSDGARIPSVPPGPPSRPPAGPAAAAAAV
SAAAAAVAAPSARQPAASLGAPPSSNGGGSSTALGSLVPGRAAANAGGGR
ETGASGAASTAATRRVEGAVPRNAPTPQPAAPRSGRSGGSSGSQGASPAA
RGGGLSGDVVASSRRVAHGCGGAGAEAGGGESARGTKRPLPGSEGSGAGA
ERGRESAAPGGGPVSNLGVVRSTTAPQVFDTRARIVSHWPPKVKDFVRKG
PGWSDGTHYLFTLKLEDDYGVVEAVAAGPEAVRLLPGCPPPAEFLASPDV
RARVERVLAGLESAGADGADGCLVDLRLRSYLAPLVGIGQRGEKCKRYSI
IAPSCLDAVRRAQREG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028389POT1
IPR012340NA-bd_OB-fold