prot_C-linearis_contig103.851.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig103.851.1
Unique Nameprot_C-linearis_contig103.851.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length231
Homology
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BLAST of mRNA_C-linearis_contig103.851.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 7.690e-44
Identity = 117/230 (50.87%), Postives = 141/230 (61.30%), Query Frame = 0 
Query:    9 EDVALNDWRLDVSGVQVVVADASSVLGAASASSSVGKAEGPTPTPAS---DTAIIEGFDLNVQIQTATDRTTNGLVGVRLQASLPRLSCNIHSSAYLLLTRLLKNELSRPAAAAPSTGTQPPASNXXXXXXXXXXXXXXXXS--RGAVASRPFPISTSSPAGGGSGVSTAAAGTVASVEPGHVPVGVSPPRVPLSGRPRGIKAVLSSELEPVTEIPGEG--DTDDDGLGG 231
            ED+A +DW LDV+GVQVVVADASS LG AS+ +      GP+   A+   DTAI+E  DLNV+++TATD +TNGL+GVR++A+LPRLSCN+HSSAYLLLTRLLKNEL RP  AA      PP S                 +  RGAVASR FP S +                  S+ PG  P G          RPR IKAVL+SELEPVTE+PGEG  +  DDG+GG
Sbjct:  974 EDIAQDDWLLDVTGVQVVVADASSFLGPASSDN------GPSANKAALSNDTAIVEEVDLNVKVRTATDLSTNGLIGVRVEANLPRLSCNVHSSAYLLLTRLLKNELERPTTAA-GADRFPPESPLVSSSREEERMTRVPQTGTRGAVASRLFPASATP-----------------SLSPGS-PGGTQ--------RPRLIKAVLASELEPVTEVPGEGPLEDSDDGVGG 1170
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BLAST of mRNA_C-linearis_contig103.851.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.940e-29
Identity = 68/103 (66.02%), Postives = 85/103 (82.52%), Query Frame = 0 
Query:    9 EDVALNDWRLDVSGVQVVVADASSVLGAASASSSVGKAEGPTPTPASDTAIIEGFDLNVQIQTATDRTTNGLVGVRLQASLPRLSCNIHSSAYLLLTRLLKNE 111
            EDVA +DW LDV+GVQVVVADASS LGAAS+ +    A+      ++DTAI+E FDLNV+++TATD +TN L+G+R +A+LPRLSCN+HSSAYLLLTRLLKNE
Sbjct:   74 EDVAQDDWLLDVTGVQVVVADASSFLGAASSDNRQSAAKAAL---SNDTAIVEEFDLNVKVRTATDLSTNCLIGIRAEANLPRLSCNVHSSAYLLLTRLLKNE 173
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMF5_ECTSI7.690e-4450.87FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYL2_9PHAE2.940e-2966.02FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:477249..479240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.851.1mRNA_C-linearis_contig103.851.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig103 477249..479240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig103.851.1 ID=prot_C-linearis_contig103.851.1|Name=mRNA_C-linearis_contig103.851.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=231bp
MVAAEGGSEDVALNDWRLDVSGVQVVVADASSVLGAASASSSVGKAEGPT
PTPASDTAIIEGFDLNVQIQTATDRTTNGLVGVRLQASLPRLSCNIHSSA
YLLLTRLLKNELSRPAAAAPSTGTQPPASNSAAEATAQAPPPGGGSSRGA
VASRPFPISTSSPAGGGSGVSTAAAGTVASVEPGHVPVGVSPPRVPLSGR
PRGIKAVLSSELEPVTEIPGEGDTDDDGLGG
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