prot_C-linearis_contig103.840.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig103.840.1
Unique Nameprot_C-linearis_contig103.840.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length775
Homology
BLAST of mRNA_C-linearis_contig103.840.1 vs. uniprot
Match: A0A6H5KWI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWI4_9PHAE)

HSP 1 Score: 675 bits (1741), Expect = 1.930e-231
Identity = 504/783 (64.37%), Postives = 576/783 (73.56%), Query Frame = 0
Query:    7 IRPSVRDAHG--VLG--CSLAVIALLSAVPGGESFLCPMAVKGVASSPGGLASGKVRQQQQRLAARDICSMVADGGKEVPGVES-DALGEARQGAPRKGPFRRVRALFGRKAAAAAAVSALVGAGAPGSAEALFGRG--KSPEMPSVPAIEQRLEDAAGEVLEAAEDVASTVEAAGGVLPEMG----DTLDGLETGDPSEESLVGG--VEGVATTAVPAKSAEKKAVAGVSTLELAKDLVVENKEVAAVVIVGAVGSRYLLVKAGGKPGRGRGSRRRRGTGGA--APKSPSMGIGQPRVSPEVAAADQKKKAESLKNARFDVDVDLFGDAVSDLPARPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINKISNAAEASSTKPVEAASATTETAASPXXXXXXXXXXXXXXXXXPPSTFYSKKMPEKGKRKGAPILNLFRRDTGPQRATTLEEALAAETPDVAVFRQALAAVLSGSAPPGEFSVKEPKALSEAVITPEDFEGEAGEKAAETSRISALTDLMETAGLSLQEGADVVADVVNAMVVRLTDAAVTSNGDASVAKASDVLLQYMDGAGALFVALCPGIALDPQIKYNGTFKRGKLEKVFEAAAKSTLKTMGDEGQMVSLDRLQASLDLFSIKKAKADSITQKIMMDLMMKMMSEGGGEXXDAEGLEKMMAAMGGAEGMGXXXXXXXXXXXXAGRSPEDHKKEVEALKAMVDSGECPKEEVDALRKMYSDAGMDIDKLVNDPMMESSMDSDAKEMVELLRKLLALWPNK 774
            +RP+ RDA G  VLG  C + ++ +LS  PGGE+FL P AV+      G  ASGK+ QQ+  +  R I SM A   + +  V S D      +  P  GP  RVR+LFGRKAA AAAVSALV AGAPGSAEALFGRG   +PEMPSVPA+EQ+LE A GEV+E   ++AS V+              + L+GLET +   E   GG  V G+ TT    +  + +AV GVST+ + KDLVVENKEV AVV+ G +GSRYLLV+ GGK                  APKSP  GIGQPRVSPEVAAAD KK+A+SLK+A FDVD+DLFGDAV+DLPARP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             XXXXXXXXXXXXXXXXX          PEK KRK  PIL+LF+RDTGPQR+TT++EAL+ E+P+VA FR+ LAAVL+ SAP GEF V+EP  L+EA I PEDFEGEAG KAA  SR+SAL +LMETAGLSL++GA+VVADVVNAMVV+LTDAAV+S G  S A AS+ LL+YMD AGALFV LCPGIALDPQIKYNGT+KRGKLEKVFEAAAKSTLK+MGDEGQM+SLDRLQ   DLFSIKK+KADSITQKIMMDLMMKMMSEGGGE  DAEGLEKMMAAMGG EG       XXXXXX AGRSPEDHK+EVEALK MV+SG+CPKEEVDALRKMY+DAG+DID LVNDP ME+SMD+DAKE+V LLRKLL LWP K
Sbjct:    1 MRPAFRDAMGGGVLGGTCLMVIVMVLSVAPGGEAFLHPAAVQ----RHGAAASGKMLQQRPAVKTRGIGSMTAGVEEGMLDVASRDENSSVTRSTP--GPLLRVRSLFGRKAATAAAVSALVSAGAPGSAEALFGRGGRSAPEMPSVPALEQQLETAVGEVVEGVGEIASAVDKXXXXXXXXXXXXEEALEGLETPEAGSE---GGDAVGGLVTTTPATEEDQGRAVGGVSTVGIVKDLVVENKEVVAVVVAGVIGSRYLLVQRGGKXXXXXXXXXXXXXXXXXXAPKSPLAGIGQPRVSPEVAAADLKKRADSLKSANFDVDLDLFGDAVADLPARPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSIKPEKSKRK--PILSLFKRDTGPQRSTTMQEALSDESPNVADFRRGLAAVLAESAPKGEFDVEEPTLLAEATIVPEDFEGEAGVKAAAASRMSALKELMETAGLSLEQGAEVVADVVNAMVVKLTDAAVSSKGVDSTAAASNALLKYMDEAGALFVTLCPGIALDPQIKYNGTYKRGKLEKVFEAAAKSTLKSMGDEGQMMSLDRLQ---DLFSIKKSKADSITQKIMMDLMMKMMSEGGGEDGDAEGLEKMMAAMGGMEGX------XXXXXXGAGRSPEDHKREVEALKQMVESGDCPKEEVDALRKMYTDAGLDIDTLVNDPNMEASMDADAKEVVVLLRKLLDLWPKK 763          
BLAST of mRNA_C-linearis_contig103.840.1 vs. uniprot
Match: A0A835Z1E0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 7.280e-39
Identity = 135/365 (36.99%), Postives = 198/365 (54.25%), Query Frame = 0
Query:  415 PPSTFYSKKMPEKGKRK-GAPILNLFRRDTGPQRATTLEEALAA-ETPDVAVFRQALAAVLSGSAPPGEFSVKEPKALSEAVITPEDFEGEAGEKAAETSRISALTDLMETAGLSLQEGADVVADVVNAMVVRLTDAAVTSNGDASVAKA--SDVLLQYMDGAGALFVALCPGIALDPQIKYNGTFKRGKLEKVFEAAAKSTLKTMGDEGQMVSLDRLQASLDLFSIKKAKADSITQKIMMDLMMKMMSEGGGEXXDAEGLEKMMAAMGGAEGMGXXXXXXXXXXXXAGRSPEDHK--KEVEALKAMVDSGECPKEEVDALRKMYSDAGMDIDKLVNDPMM-ESSMDSDAKEMVELLRKLLALWP 772
            PPS   ++  PE  K+K G  +  LF++     R TT+ +A++A E   +  F QALA  LS  APPG F+  +P  L +  +     EG              L +L+ ++G +  + AD +ADVVNAMVV LTDAAV +  D    +   SD+LL YMD AG  F A+CPG+ALDP ++YNG  K+ +LE+++E   ++ +    D+   +S  R +   D+ +IK++KA S+ QK++M+++ KMM EGG  XX             G                  G  PE  +   ++EA KAMV  G   ++EV  LRKMY D GMDID++V +    ES+MD +AKE+  LLR++L   P
Sbjct:  227 PPSAMEAQAAPEPPKKKLGLGLGGLFKKGAASNRPTTIGDAISAQEGGGLEGFSQALAGYLSHFAPPGSFA-PDPTFLRDGELDRAGAEG-------------TLLELVSSSGATSLQVADAIADVVNAMVVGLTDAAVAAIKDEDRCRQALSDLLL-YMDNAGGTFAAVCPGVALDPPLRYNGAAKKRQLEELYENFTRAMVT---DQSADMSA-RQERLRDMLNIKESKARSLEQKVLMEVVQKMMKEGGDXXXXXXXXXXXXXXXEG------------------GGMPEGPEVAAQLEAFKAMVKDGNVSRDEVTELRKMYKDMGMDIDQMVAESAAAESTMDREAKELYSLLRQMLEQHP 554          
BLAST of mRNA_C-linearis_contig103.840.1 vs. uniprot
Match: H6WBA5_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA5_VAULI)

HSP 1 Score: 125 bits (314), Expect = 3.720e-27
Identity = 89/269 (33.09%), Postives = 150/269 (55.76%), Query Frame = 0
Query:  514 ISALTDLMETAGLSLQEGADVVADVVNAMVVRLTDAAVTSNGDASVA--KASDVLLQYMDGAGALFVALCPGIALDPQIKYNGTFKRGKLEKVFEAAAKSTLKTMGDEGQMVSLDRLQASLDLFSIKKAKADSITQKIMMDLMMKMMSEGGGEXXDAEGLEKMMAAMGGAEGMGXXXXXXXXXXXXAGRSPE-----DHKKEVEALKAMVDSGECPKEEVDALRKMYSDAGMDIDKLVNDPM-MESSMDSDAKEMVELLRKLLALWPNK 774
            I+ L  L +++  +    A+ +A + N M+  L DAAV +N  +  A  +A   L+++M  +G++F A+CPGI LDP ++YNG  K+ +LE+++ A+  +++ +   E  M     ++   DL  IK+ KA +I QK MMD +  M+ +GGG+    E +  ++  +G A G               G  PE     + + ++E+ K +V  G+  +EEV  LRKMY + GMDIDKLV +    E  MD+  +E+ +LLR++L+ +P K
Sbjct:  167 INTLISLSDSSKENSNSVAEAIACIANPMINELVDAAVAANQKSPPACEEALMGLVRFMKVSGSVFEAVCPGIVLDPPLRYNGGSKKKQLEEIY-ASLSASISSENSEELMSFQKEIR---DLLGIKEFKAKAIEQKAMMDALQNMVKDGGGDGSSQEQMAALLQNIG-ANG---------------GPEPEMPSGPEMEAQLESFKNLVKGGQVTEEEVKELRKMYKEMGMDIDKLVKESEGNEGMMDAQGRELFDLLRQMLSQYPLK 415          
BLAST of mRNA_C-linearis_contig103.840.1 vs. uniprot
Match: A0A8J2S851_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S851_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.880e-11
Identity = 82/262 (31.30%), Postives = 135/262 (51.53%), Query Frame = 0
Query:  519 DLMETAGLSLQEGADVVADVVNAMVVRLTDAAVTS--NGDASVAKASDVLLQYMDGAGALFVALCPGIALDPQIKYNGTFKRGKLEKVFE----AAAKSTLKTMG---DEGQMVSLDRLQASLDLFSIKKAKADSITQKIMMDLMMKMMSEGGGEXXDAEGLEKMMAAMGGAEGMGXXXXXXXXXXXXAGRSPEDHKKEVEALKAMVDSGECPKEEVDALRKMYSDA--GMDIDKLVNDPMME-SSMDSDAKEMVELLRKLL 768
            D ++ AGL L   A+  ADVVNA ++ L DAAV S   GDA        +++    AG  F  L         + Y G   R +L+ +F     A   + L+  G   +EG+ V L  +     LF I   +AD + Q+++  L+ +MM + G    D EGL   +AA+ G E       XXXXXXXX    P + ++++ AL+ +VDSG+   ++   ++KM++++  G D+D+ + +       +D+ A+E ++LL KL+
Sbjct:  319 DKLQAAGLGLDAAANAFADVVNAGLIPLVDAAVPSLKQGDAESLPPLSNVVRVAAVAGLAFEELGLVPFAGTPVVYEGRASRSQLQSLFARYAAAGVAAGLEEEGGVTEEGEAVDLAAVDTLQALFQISDKQADRLAQQVVTKLVQQMMEKAG--DGDQEGL---LAALAGQE-------XXXXXXXXXXXXPTNPQEQMAALRELVDSGQLTDDDKREIKKMFAESLGGGDVDEKIREANKNRDQLDAQAREALDLLNKLM 568          
BLAST of mRNA_C-linearis_contig103.840.1 vs. uniprot
Match: F0YB97_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB97_AURAN)

HSP 1 Score: 65.9 bits (159), Expect = 2.790e-7
Identity = 77/257 (29.96%), Postives = 127/257 (49.42%), Query Frame = 0
Query:  524 AGLSLQEGADVVADVVNAMVVRLTDAAVTS--NGDASVAKASDVLLQYMDGAGALFVALCPGIALDPQIKYNGTFKRGKLEKVFEA-AAKSTLKTMGDEGQMVS-------LDRLQASLDLFSIKKAKADSITQKIMMDLMMKMMSEGGGEXXDAEGLEKMMAAMGGAEGMGXXXXXXXXXXXXAGRSPEDHKKEVEALKAMVDSGECPKEEVDALRKMYSD--AGMDIDKLVNDPMM-ESSMDSDAKEMVELLRKL 767
            AGL   E A   A+VVNA++V L DAAV S    DA        ++     AG +F  L         + Y G   + +L+ +F   AA      + ++G   +       +D LQA   +F+I   +AD + Q+++  L+ +MM     E   AE  E ++ A+ GA       XXXXXXXXX    P D + ++ AL+ +VDSG+   ++   ++KM+++   G D+D+ +      +  +D  A++ ++LL KL
Sbjct:  718 AGLDKAEAAATFANVVNAVLVALVDAAVPSLKRSDAESLPPLQKVVALTAAAGGVFEELGLVEYAGTPVVYEGRASKSQLQSLFSRYAAAGVAAGLSEDGDATAAAADVAMVDTLQA---IFAISDKQADRLAQQVVTKLVQQMM-----EQAQAEDPEGLLEALAGAS------XXXXXXXXXXXXDPADVEGQMAALQQLVDSGQLGDDDKREIKKMFAEQLGGGDVDEAIRQANANKDQLDPQARQALDLLNKL 960          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KWI4_9PHAE1.930e-23164.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z1E0_9STRA7.280e-3936.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H6WBA5_VAULI3.720e-2733.09Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A8J2S851_9STRA2.880e-1131.30Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YB97_AURAN2.790e-729.96Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..774
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..36
score: 0.486

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:338031..352898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.840.1mRNA_C-linearis_contig103.840.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig103 337881..353399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig103.840.1 ID=prot_C-linearis_contig103.840.1|Name=mRNA_C-linearis_contig103.840.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=775bp
MQQQRIIRPSVRDAHGVLGCSLAVIALLSAVPGGESFLCPMAVKGVASSP
GGLASGKVRQQQQRLAARDICSMVADGGKEVPGVESDALGEARQGAPRKG
PFRRVRALFGRKAAAAAAVSALVGAGAPGSAEALFGRGKSPEMPSVPAIE
QRLEDAAGEVLEAAEDVASTVEAAGGVLPEMGDTLDGLETGDPSEESLVG
GVEGVATTAVPAKSAEKKAVAGVSTLELAKDLVVENKEVAAVVIVGAVGS
RYLLVKAGGKPGRGRGSRRRRGTGGAAPKSPSMGIGQPRVSPEVAAADQK
KKAESLKNARFDVDVDLFGDAVSDLPARPPPTDPPSAEPSPSPSEAMKGA
VAARDAATAAAESAAESLINKISNAAEASSTKPVEAASATTETAASPEST
PAESPAASEPAETPPPSTFYSKKMPEKGKRKGAPILNLFRRDTGPQRATT
LEEALAAETPDVAVFRQALAAVLSGSAPPGEFSVKEPKALSEAVITPEDF
EGEAGEKAAETSRISALTDLMETAGLSLQEGADVVADVVNAMVVRLTDAA
VTSNGDASVAKASDVLLQYMDGAGALFVALCPGIALDPQIKYNGTFKRGK
LEKVFEAAAKSTLKTMGDEGQMVSLDRLQASLDLFSIKKAKADSITQKIM
MDLMMKMMSEGGGEGGDAEGLEKMMAAMGGAEGMGEMGGMPGMGGMGAGR
SPEDHKKEVEALKAMVDSGECPKEEVDALRKMYSDAGMDIDKLVNDPMME
SSMDSDAKEMVELLRKLLALWPNK*
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