mRNA_C-linearis_contig103.826.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig103.826.1
Unique NamemRNA_C-linearis_contig103.826.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: A0A6H5KU51_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU51_9PHAE)

HSP 1 Score: 563 bits (1451), Expect = 2.000e-192
Identity = 264/295 (89.49%), Postives = 283/295 (95.93%), Query Frame = 2
Query:  287 VGLAQGYFGVYDGHCGPEAVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP 1171
            VGLAQGYFGVYDGHCG EAVQ VRD+LHA +GEHP FW++P+RA+RE+F+SLDE FL LAGER+WYSGTTVL+ALMRGRKLLIGNVGD EAVLCRGDD+VH+SPVH PARPCE++RI+AANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGT+G  P DMPVLFAWPHGHSGEF+DDLLTAEPEF+E EIGLDDEFLLMACDGLWDVLGKREAVD+AKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP
Sbjct:   87 VGLAQGYFGVYDGHCGSEAVQNVRDRLHAVIGEHPSFWEEPKRAIRESFVSLDEQFLLLAGEREWYSGTTVLIALMRGRKLLIGNVGDGEAVLCRGDDVVHMSPVHDPARPCEHDRIIAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTDGVAPEDMPVLFAWPHGHSGEFHDDLLTAEPEFQEAEIGLDDEFLLMACDGLWDVLGKREAVDYAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP 381          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: D8LKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD5_ECTSI)

HSP 1 Score: 452 bits (1163), Expect = 9.970e-142
Identity = 219/265 (82.64%), Postives = 234/265 (88.30%), Query Frame = 2
Query:  269 DGVGGEVGLAQGYFGVYDGHCGPEAVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDE 1063
            DGVGGEVGLAQGYFGVYDGHCG EAVQ+VRD+LHA VGEHP FWK+P+RA+RE+F+SLDE FL LAGER+WYSGTTVLVALMRGRKLLIGNVGD EAVLCRGDD+VH+SPVH P                    ELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRR+EQGT+G  P DMPVLFAWPHGHSGEF+DDLLTAEPEF+E EIGLDDEFLLMACDGLWDVLGKREAVD+AKNFFDE
Sbjct:  696 DGVGGEVGLAQGYFGVYDGHCGSEAVQYVRDRLHAVVGEHPSFWKEPKRAIRESFVSLDEQFLLLAGEREWYSGTTVLVALMRGRKLLIGNVGDGEAVLCRGDDVVHMSPVHDP--------------------ELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRVEQGTDGVAPEDMPVLFAWPHGHSGEFHDDLLTAEPEFQEAEIGLDDEFLLMACDGLWDVLGKREAVDYAKNFFDE 940          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: A0A7S2REK4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REK4_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.700e-76
Identity = 144/288 (50.00%), Postives = 179/288 (62.15%), Query Frame = 2
Query:  308 FGVYDGHCGPEAVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMR--GRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFD---EGMCSQAVAERMCELAYRMGTSDNVTVVIVQF 1156
            +GVYDGHCG EA       LH  + EH      P   +R+AFL LD  FL LA +R+ Y GTT +V L+   GR++ + NVGD  AVLCRG   V LS  H P RP E ERI AANGW+T ERELF+ QL +MDL DP+IR AA E V+W TI+RVCGELAVSRSIGD DFKG             P     + F +P GHS  F  DL+ AEP+ E  E+   DEF+++A DGLWDVL  ++ VD  ++F     E    Q VA  +C LA R+G++DN+TVV+V F
Sbjct:  503 YGVYDGHCGSEAADVAARDLHTYIFEHEALQTSPLTTLRDAFLRLDREFLELARDRNLYCGTTAIVMLLLDGGRRMFVSNVGDSAAVLCRGGQAVELSQSHKPDRPDEKERIAAANGWITEERELFMGQLHRMDLKDPKIRSAAEEVVQWVTISRVCGELAVSRSIGDPDFKGIA----------GPEPSQDLFFCFPQGHSRTFSADLVIAEPDIESFEVSPGDEFVVLASDGLWDVLNGQQVVDAVRDFQQAEPESTLDQ-VAHHLCRLALRLGSADNITVVVVAF 779          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: W7TA28_9STRA (Protein phosphatase 1e n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA28_9STRA)

HSP 1 Score: 257 bits (656), Expect = 2.110e-73
Identity = 141/320 (44.06%), Postives = 184/320 (57.50%), Query Frame = 2
Query:  215 DPATSASXXXSAAGGLRLDGVGGEVGLAQGYFGVYDGHCGPEAVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQG---TEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHF 1165
            D A  AS    AA GL  +G G E    + ++ +YDGHCG  A ++ + + H  +   P F   PE AM      LD+  L +  +   Y GTT ++   RGR + +GNVGDC A+LCR      LS   +P R  E ERI  ANGWVT E ELF+ QL +MDL DP I  A  + V   TI RVCG L+VSRSIGD DFKGF+    E+G   TE     +   +FA+P GHSG F+ DL+ A+PE  +  +   D FLL+ACDG WDV+ + EAV  A      G+    VA ++  LA R+G+SDNVTVV+V F H+
Sbjct:  116 DLAGVASGETGAAQGLPKEGQG-EQAEMEAFYAIYDGHCGIGAARYAQQRTHHYLMADPLFVSSPEAAMVNVCRRLDKEVLEMCEQEGLYCGTTAILTFFRGRTVYVGNVGDCAAILCRDGKAFPLSSAQTPGRKDERERIERANGWVTEEMELFIGQLHRMDLADPSIAEAVDKKVAVNTIHRVCGNLSVSRSIGDPDFKGFSPHPGEEGLGGTEAGEAGEEDSIFAFPPGHSGVFHGDLVIADPETRQITVSEADAFLLVACDGFWDVVDEEEAVAQATGLLAGGLGVSDVAAQLGNLALRLGSSDNVTVVLVVFEHW 434          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: A0A4D9CQ52_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ52_9STRA)

HSP 1 Score: 259 bits (663), Expect = 6.060e-70
Identity = 142/320 (44.38%), Postives = 184/320 (57.50%), Query Frame = 2
Query:  215 DPATSASXXXSAAGGLRLDGVGGEVGLAQGYFGVYDGHCGPEAVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQ---GTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHF 1165
            D A  AS    AA GL  +G G E    + ++ +YDGHCG  A ++ + Q H  +   P F   PE AM      LD+  L +  +   Y GTT ++   RGR + +GNVGDC A+LCR      LS   +P R  E ERI  ANGWVT E ELF+ QL +MDL DP I  A  + V   TI RVCG L+VSRSIGD DFKGF+    E+   GTE     +   +FA+P GHSG FY DL+ A+PE  +  +   D FLL+ACDG WDV+ + EAV  A      G+    VA ++  LA R+G+SDNVTV++V F H+
Sbjct:  652 DLAGVASGEMGAAQGLPKEGQG-EQAEMEAFYAIYDGHCGIGAARYAQQQTHHYLMADPLFVSSPEAAMVNVCRRLDKEVLEMCEQEGLYCGTTAILTFFRGRTVYVGNVGDCAAILCRDGKAFPLSSAQTPGRKDERERIERANGWVTEEMELFIGQLHRMDLADPSIAEAVDKKVAVNTIHRVCGNLSVSRSIGDPDFKGFSSHPGEESLGGTEAGEAGEEDSIFAFPPGHSGVFYGDLVIADPETRQITVSEADAFLLVACDGFWDVVDEEEAVAQATGLLAGGLGVSDVAAQLGNLALRLGSSDNVTVLLVVFEHW 970          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: A0A835ZH46_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH46_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.700e-63
Identity = 101/158 (63.92%), Postives = 121/158 (76.58%), Query Frame = 2
Query:  698 MDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP 1171
            MDL DP IR  A+E V+WTTITR CGEL+VSR+IGDRDFKGFT+RR+E GT G PP + P LF WP  HSGEFYDDLL A P+F E EI  +D+FLL+ACDGLWDVL   +AV H     D+G+C+Q  A+++CELA R+GTSDNVTV+IV  HH  P
Sbjct:    1 MDLQDPVIRSMASEQVKWTTITRTCGELSVSRAIGDRDFKGFTRRRMEAGTRGVPP-ENPALFLWPQNHSGEFYDDLLVAHPDFHEEEITDEDQFLLLACDGLWDVLSHGDAVKHTLELLDQGLCAQGAAQQLCELATRLGTSDNVTVIIVSLHHHPP 157          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: F0WZ08_9STRA (Protein phosphatase 1E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZ08_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.850e-59
Identity = 118/287 (41.11%), Postives = 166/287 (57.84%), Query Frame = 2
Query:  299 QGYFGVYDGHCGPEAVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFH 1159
            Q  + ++DGH G +A QF  D+L A +  H  F+ +  RA  E F  +D+ FLA A    W +GTTV +  +RG KLL  N+GD  AV+C G+D + +    +P R  E +RI    GWV  EREL + +L  MDL DP+I+  A   VRW  I RV GELAVSR+IGD ++KG               L     +A+P GH   F+ DL+   PEF+E EI  D  FL++ACDGLWD +  +EAV H +    +G  ++  +  +  LA R G+SDNV+V++V+F+
Sbjct:  732 QAIYALFDGHAGVQAAQFANDRLAAYICAHHDFYSNTRRAFDECFRRVDKEFLAQAAIEKWSAGTTVALVFIRGNKLLTANIGDSRAVVCLGEDALDVIEEQTPGRKDERDRIEQQGGWVKEERELHISKLHSMDLSDPRIKEKAERIVRWVHIYRVNGELAVSRAIGDLEYKGRA-------------LSEYAFWAFPEGHDRVFHGDLVIPVPEFKEIEITSDVAFLILACDGLWDTITSQEAVRHVRERLQKGETAEIASRSLANLAIRSGSSDNVSVIVVRFN 1005          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: H3HE73_PHYRM (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=H3HE73_PHYRM)

HSP 1 Score: 222 bits (565), Expect = 1.890e-58
Identity = 119/284 (41.90%), Postives = 161/284 (56.69%), Query Frame = 2
Query:  299 QGYFGVYDGHCGPEAVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIV 1150
            Q Y+ ++DGH G  A  F   +L   +  H  F  D   A  E F  +D+ FLA A E     GTTV V L+RG +L+  N+GDC AV+  G   + +    +P R  E +RI    GWV  EREL L +L  MDL DP+I+  A   V+W TI RV GELAVSR+IGD D+KG    + E              +A+P GH   F+ DL+ + PE +E EI  + +FL++ACDGLWD +  REAV +  +  +EG  +Q  ++ +  LA R G+SDNVTVVIV
Sbjct:  392 QSYYALFDGHSGVRAATFSNQRLLPYLTSHEHFMSDARIAFEECFARIDKEFLAKAEEESLDDGTTVAVVLIRGNRLITANIGDCRAVVSIGGQALDIIEEQTPGREDERKRIEEQGGWVKEERELQLSKLHSMDLSDPEIQQRAERVVKWVTIYRVNGELAVSRAIGDIDYKGEALSKYE-------------YWAFPEGHDRVFHGDLVISMPECQEIEITPEFDFLILACDGLWDTIKSREAVTYVADRLNEGYSAQQASQSLANLAIRSGSSDNVTVVIV 662          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: A0A2D4C4D2_PYTIN (Protein phosphatase 1E, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4D2_PYTIN)

HSP 1 Score: 209 bits (532), Expect = 3.890e-58
Identity = 110/270 (40.74%), Postives = 156/270 (57.78%), Query Frame = 2
Query:  341 AVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIV 1150
            A  F  ++L A +GEH  F  +  +A  + F  +DE FL  A       G+T  V L+RG KLL  N+GD  AV+      + +    +P R  E  RI    GW+  EREL + +L  MDL DP+I+  A   VRW TI RV GELAVSR+IGD D+KG   +  E              +A+P GH  +F+ DL+T EPEF+E EI  + +FL++ACDGLWD +  +EAV+H    ++EG  + +++  + +LA R G+SDNV+VV+V
Sbjct:    5 AATFTNEKLLAYLGEHEAFMSNARQAFSDCFRRIDEEFLQRAASESLSDGSTAAVVLIRGNKLLTANLGDSRAVVSINGTALDVIEEQTPGRADERSRIERCGGWIKEERELQMSKLHSMDLSDPRIQQKAERVVRWVTIYRVNGELAVSRAIGDIDYKGQALQDYE-------------FWAFPEGHDRKFHGDLVTCEPEFKEIEITPEVKFLILACDGLWDTITSQEAVNHVTEKWEEGWSATSISRSLADLAIRSGSSDNVSVVVV 261          
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Match: A0A3F2RU78_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU78_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.260e-57
Identity = 110/267 (41.20%), Postives = 152/267 (56.93%), Query Frame = 2
Query:  350 FVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLALAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSPARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSGEFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIV 1150
            F   +L + +  H  F  D   A  E F  +DE FL  A E     GTT  V L+RG +L+  N+GDC AV   G + + +    +P RP E ERI A  GWV  EREL L +L  MDL DP+I+  A   V+W TI RV GELAVSR+IGD D+KG    + E              +A+P GH  EF  DL+ + PE++E EI  + +FL++ACDGLWD +  +EAV +     +EG  ++  ++ +  LA R G+SDNV+V++V
Sbjct:    2 FSNQRLVSYLCAHDSFMTDTRLACEECFARIDEEFLVKAKEESLGDGTTAAVVLIRGNRLITANIGDCRAVASIGGEALDIIEEQTPGRPDERERIEAQGGWVKEERELQLSKLHSMDLSDPEIQQRAERVVKWVTIYRVNGELAVSRAIGDIDYKGEALSKYE-------------YWAFPEGHDREFRGDLVISVPEYQEIEITPEFDFLVLACDGLWDTIKSKEAVKYVSERLNEGYSAKQASQSLANLAIRSGSSDNVSVIVV 255          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU51_9PHAE2.000e-19289.49PPM-type phosphatase domain-containing protein n=1... [more]
D8LKD5_ECTSI9.970e-14282.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2REK4_9STRA1.700e-7650.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TA28_9STRA2.110e-7344.06Protein phosphatase 1e n=2 Tax=Nannochloropsis gad... [more]
A0A4D9CQ52_9STRA6.060e-7044.38Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835ZH46_9STRA1.700e-6363.92Phosphatase 2C-like domain-containing protein n=1 ... [more]
F0WZ08_9STRA1.850e-5941.11Protein phosphatase 1E putative n=1 Tax=Albugo lai... [more]
H3HE73_PHYRM1.890e-5841.90Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A2D4C4D2_PYTIN3.890e-5840.74Protein phosphatase 1E, putative n=1 Tax=Pythium i... [more]
A0A3F2RU78_9STRA3.260e-5741.20PPM-type phosphatase domain-containing protein n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:169353..174740 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
KEGG koko:K01090
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine phosphatase activity
EggNOG OGsCOG0631@1,KOG0698@2759
EC3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons7
Taxonomic scopeEukaryota
Seed ortholog score453.4
Seed ortholog evalue9.5e-125
Seed eggNOG ortholog2880.D8LKD5
Model size2539
Cds size1017
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927376.0318184-UTR-C-linearis_contig103:169352..1707141622927376.0318184-UTR-C-linearis_contig103:169352..170714Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 169353..170714 -
1690879663.0897112-UTR-C-linearis_contig103:169352..1707141690879663.0897112-UTR-C-linearis_contig103:169352..170714Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 169353..170714 -
1622927376.1238117-UTR-C-linearis_contig103:174580..1747401622927376.1238117-UTR-C-linearis_contig103:174580..174740Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 174581..174740 -
1690879663.1722395-UTR-C-linearis_contig103:174580..1747401690879663.1722395-UTR-C-linearis_contig103:174580..174740Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 174581..174740 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927376.0438619-CDS-C-linearis_contig103:170714..1708281622927376.0438619-CDS-C-linearis_contig103:170714..170828Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 170715..170828 -
1690879663.1014893-CDS-C-linearis_contig103:170714..1708281690879663.1014893-CDS-C-linearis_contig103:170714..170828Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 170715..170828 -
1622927376.053888-CDS-C-linearis_contig103:171435..1716271622927376.053888-CDS-C-linearis_contig103:171435..171627Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 171436..171627 -
1690879663.1103928-CDS-C-linearis_contig103:171435..1716271690879663.1103928-CDS-C-linearis_contig103:171435..171627Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 171436..171627 -
1622927376.0673094-CDS-C-linearis_contig103:172284..1723901622927376.0673094-CDS-C-linearis_contig103:172284..172390Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 172285..172390 -
1690879663.1202495-CDS-C-linearis_contig103:172284..1723901690879663.1202495-CDS-C-linearis_contig103:172284..172390Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 172285..172390 -
1622927376.0783098-CDS-C-linearis_contig103:172726..1728211622927376.0783098-CDS-C-linearis_contig103:172726..172821Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 172727..172821 -
1690879663.1304095-CDS-C-linearis_contig103:172726..1728211690879663.1304095-CDS-C-linearis_contig103:172726..172821Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 172727..172821 -
1622927376.091522-CDS-C-linearis_contig103:173410..1735581622927376.091522-CDS-C-linearis_contig103:173410..173558Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 173411..173558 -
1690879663.1398082-CDS-C-linearis_contig103:173410..1735581690879663.1398082-CDS-C-linearis_contig103:173410..173558Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 173411..173558 -
1622927376.1021378-CDS-C-linearis_contig103:173969..1740881622927376.1021378-CDS-C-linearis_contig103:173969..174088Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 173970..174088 -
1690879663.148784-CDS-C-linearis_contig103:173969..1740881690879663.148784-CDS-C-linearis_contig103:173969..174088Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 173970..174088 -
1622927376.1134598-CDS-C-linearis_contig103:174337..1745801622927376.1134598-CDS-C-linearis_contig103:174337..174580Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 174338..174580 -
1690879663.1576684-CDS-C-linearis_contig103:174337..1745801690879663.1576684-CDS-C-linearis_contig103:174337..174580Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 174338..174580 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.826.1prot_C-linearis_contig103.826.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig103 170715..174580 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig103.826.1

>prot_C-linearis_contig103.826.1 ID=prot_C-linearis_contig103.826.1|Name=mRNA_C-linearis_contig103.826.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=339bp
MPRLSSSPAGGGDGRLTVDPATSASAAASAAGGLRLDGVGGEVGLAQGYF
GVYDGHCGPEAVQFVRDQLHARVGEHPFFWKDPERAMREAFLSLDENFLA
LAGERDWYSGTTVLVALMRGRKLLIGNVGDCEAVLCRGDDLVHLSPVHSP
ARPCENERILAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTI
TRVCGELAVSRSIGDRDFKGFTKRRLEQGTEGAPPLDMPVLFAWPHGHSG
EFYDDLLTAEPEFEETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFD
EGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRPF*
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mRNA from alignment at C-linearis_contig103:169353..174740-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.826.1 ID=mRNA_C-linearis_contig103.826.1|Name=mRNA_C-linearis_contig103.826.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5388bp|location=Sequence derived from alignment at C-linearis_contig103:169353..174740- (Chordaria linearis ClinC8C monoicous)
TGGGGGTGGTGGTGGTCGCGGTCCCGGCATCGACGACGGCGGGTTATCCC CGTCCTCGTCGACGGCGCCGGCGGCACCACCACCACCGGTACCGGTAGCT GCAGGAGCGACGGGGTCAGAACAAGCCTCCCCGCCGCCTCCTCCTCCTTC TTCTTCGCCGATGCCTCGGCTGAGCTCCTCTCCCGCGGGAGGAGGGGACG GGAGGCTCACCGTCGACCCGGCAACGTCGGCGTCGGCGGCGGCGTCGGCG GCGGGGGGGCTTCGGCTGGACGGGGTCGGCGGGGAGGTGGGCCTGGCGCA GGGGTACTTCGGGGTGTACGACGGGCACTGCGGGCCGGAGGCGGTGCAGT TCGTGCGGGACCAGCTGCACGCGAGGGTGGGGGAGCACCCTTTTTTCTGG AAGGTACCTACCTGTGCACGAGGCACAGCTCGTTTGCTCGTTTTGGGGCG GTGGAGGAGCCGTGGTCGTCGCTGTGGTAGGAAGGAAACTACTGGCGCGG CCAGAATTGATCCGAAGGCATGCTAGTCGACAGGGGAGGATATTCCCACA GACGATCAGGCGAAGGCACCCCCTGAAGTTGGTGTGTGCTGAAATCAACG AGCTTTTTCGGTTTTGGCTCTGCGCCTCCGTGATGTTGACAATAACGTTC AGGATCCAGAGCGGGCGATGCGCGAGGCGTTCCTGTCGCTGGACGAGAAT TTCTTGGCGCTAGCGGGGGAGAGGGACTGGTACAGCGGCACCACCGTCTT GGTTGCCTTGATGAGGGGGAGGTGAGACTGTGTATATACTTGGCGGCATG CGTGTCCTTGGTGTTTTGATTGTTTTCTACGAAACGTCAGCTGTCGATCA TACGTCTGACCTGTGGGTGTATCGTTCCAGGGGGGGATGCTGTTGTAGAC ACACTGCAGGGACCCTCCCTCACCGCCGCAAACCGTGGGAATGCCACAAA ACCCGTAATCCGTATCGATCTTTGGCCTACTTGGTTCCCCCTTTTATTCC TTCCGTCCCCCACTTTATCTTTCTTGGGTGTGTTTCTTCAAGGCGGATTG GTTGACGGCGTACAGCAGTAGTCGACGGGAAACCTCCGGTAACTCAGCTT GAATGACTGACGTGACCTAATGTGGCCTATCGTATTGCATTCTCTGCCTT GCTCTGGTGTGGTCTGCCGCAAAAAAAAACAGGAAGCTTTTGATCGGGAA CGTGGGCGACTGCGAAGCGGTCCTGTGCAGGGGCGACGACTTGGTGCACT TGTCCCCGGTGCACAGCCCGGCCAGGCCCTGCGAGAACGAGAGGATTCTA GCGGCCAACGGATGGGTCACCACGGAAAGGGTGCGCTTTTTGTTGTTGAC AGTCCCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT CGTTGTTGTTGTTGTTGTCGTTGTTGTTGTTGTTGTCGTGTGTTTTTTCT GATTGTTTTTGCGCTGAACGTCAGCATTCTACATGGCGAAGCAGCGGATG GGTCACCACGCAGGGAGTGCGCTAAATTTACTGTATTGTTTTTTTATTCC TGTAGTATGTAAAAGTGTTTGCTTGAAGTATTTATTTATTTTTTTGCTGC AGCATTCTATATACCTACATCCACCCCGTGGTATGTATGACAAAACAGCG AACGATACGGATTTGCGTATTTTGTGCCTTGTAGTGTGGGAGGGTCAGGG AGGGCTTAAAACGGTGTGTCTACAACAGTAGTCCGCCAGGGACGACTTTT CCACAGGTCGGACGTATTCGGCTGACTACAACAGAAAATATTTAAAAACA GCATTACCGAGGCCACACCAGCCGATCACGAAGCGAAGAAGTTTAAGTTT GGTCATGAGCCAAGTCAAGCCAAAGTTCAAGCGATGTTGTGTTTCTGTCT CTTTTCGTGTGTTTTCCAGGAGCTGTTCTTGCGGCAGCTGAAGCAGATGG ATCTCGATGATCCGCAGATCAGAATGGCCGCCACGGAGCACGTGAGGTGG ACCACCATCACAAGGTACCTACACCTAACCCTAACCCTGATGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTATTGTGAGTGTGAACATACTCCGTACCAA GTGGTCGCAACACTTGCAGACGTGGGCATAGAAAAACAAACGGCTTTTGC GACAACACGCACGCAAAGCACACACGGTCTACAAAACATACACCAGCAAG ATATATTTTGTTTTCCGTGAGACAACAGGAGCGTCATCCAGCGACTCATT ACCGTCTGTTTTTGCGTGTGAAGTTCTTTGAGATGATAAGCTTGACAGCC TTCGCCGCCCATGTCAAACATTTGTTCGTTTTTTGTTTGTTTTGGGTCAG GGTATGCGGAGAGCTGGCAGTGTCGAGATCAATCGGTGACAGGGACTTCA AGGGTTTCACCAAGAGGCGGCTGGAACAGGGCACGGAGGGAGCCCCACCC CTAGACGTGAGCCACAACAGTGGGGACGATTTTGCTCATGTTGCTGTCTG TGGTTTGACGTTAATTCGATATTACCGTTTCCCCCATGACCAGGACAGCA TGCATGATAGGGTTGCTTATTCTTTTCTTTCTCGTTGAGAACCATTCCGA GGGTCATTCTGAGGACCGTGCCGCTCCGAAAATCCCGCTCAAACATTGTC TACATGCTGAGTTCACCCAGTTTTTCACCCCCCGCGGTCTTGTCATTTTT CAGATCCTTTTCGCCTGCGATTGTTTATATTGCTGCTGTTGTTGTTGTTG CTGTTGTTGTTGTTGTCGTCTTGACATTAAAAACCATCCCGTCTCTCTCC ACCCAGTACCCCCCTTCGTCCGTACTGATCCAACAGACACAGCCAATTCC CGTGGTCACAGGTTAACTTACCCTCTCAAAAAGGTACACTCCAAATAAAA TGGACCCGAACGATCAGCAGAGCAATAAAAATAAAATAAAATAAAAACAA GTAGTCTGGAACCCTCCGCTCCCCTCTGCACGCTATGCGGGAAAAAAAAT AAAACAGGAGTAAAATAAAACTATACTTCTACTGGAGTATTACACGCTGA AATTCCGAAATTACCGAGTGTTTTTACCACCCGCGGTCTTGCTTTTTCTT GTGTTTTGTGCAGATGCCGGTGCTTTTCGCCTGGCCGCACGGACACTCGG GCGAGTTCTACGACGACCTCCTGACGGCCGAGCCGGAGTTCGAGGAGACG GAGATCGGGCTGGACGACGAGTTTCTGTTGATGGCGTGCGACGGCCTATG GGACGTGCTCGGGAAGCGGGAGGCGGTGGACCACGCCAAAAACTTCTTCG ACGAGGTATGCTGTATCTATGTGTTAGGTTCATAATTTGATGCTCTTGTC TGTCGTTTTCTCTTACCTGTGTAGTGATGGTGCTGGTAGGAGAGGGTGGG CCACGCGAAAGCTGTTGGAACCGGGTGTAGTTTTCGTGTTTGGGATGTTC CACCCCGAATAGCAAGTTGGCTTACAGCGTATGTAGCACGAATCGACTGC TTAACGTCTGGCGGTCCACATTTTGTTGGGTTTGTTCGATTTATCGATAA GGTAACAGTTTCACGGAGATGAGACGTCCTTGCTTAGGGTCGTTCTTATC GACAAGTTTTTTCACGGATTCGTGGAAAAAATAAAAATCCGTGAAAAAAA ATCACGGATTCGTGATTTTCACGAATCCGTGAAAAAACTAAAACTTGGTC GATACTGTAAGAGCGGCCCTTAGTGTTTGTTTGTGTTTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTTTAACGATTTCCGAGACAGATGTTGA ACCTCAATTTAATATTTACCTCATCCGCTTTCCCTCAAGATCTTCCGCTC CCTACCGCTTACCGCCTTGCCCCAATTTCTCCGCCTTTTTGCTCGTCCCG GAAAAACCTCAGGGCATGTGCTCGCAGGCCGTTGCGGAGCGCATGTGTGA GCTAGCCTACCGCATGGGGACTTCGGACAACGTTACCGTTGTCATCGTCC AGTTCCACCACTTCCGCCCGTTTTGAAACGCTTTTAATATACTTCGGAGT ATGAAACCCACCCGCTAGGAAGTGGAAGAGGGCGAGACGATTGTGCATTT TTATCTTGCCCGCCGGGTTGGCTTTGGGAACCTGAGAGGCTGAATTGATG TCTGCATGAGGTTTTTAAGTATTCCCATTTGCGTCCGTGTCGCGTGGAAG GAAGACCCTCCCTCAATTCGTGCCCAGTTGGGTGAACGCTGTTTGAGACG ACTCGGTTGTCGTGGAAGAATGGGGAGGGGGCGGTAGTGAAGCGTCCCCG GAGTAGGTTGTCCCGCAACATCAACATGAACCAAATTTTGAACTTGATGA ACGGTTGTTCCTCCCGGGTTCTTGCCATTCTAAGAGAGAGTCTTGATTTG ATGCCACCACCATTTTGAAGAATGAGGGGTGGACGGTTTTTATGCTGCCG TATTGATATGATGGCGAGTTTGCAGGACTACTAGCTAAAGTTGGTGGAAT ACGGAAAGAAGTGTAGATGCGAGCTGACTGCTGACTGGGGGCCTGGGATT AGCGTCATCTTGTATATTTTTTGCTACATCAAGACGTCGGGTGGGCTAGA ATTACCACCTTAGATTGCTGTGCAAATAGTCGTTTCTAGCGGGGATGGAT TGTGTGGTATGCGTGGGTACTAGTTCCCAGGTCGTGCCCGAGTGACGGTA ACTACGGGCTGCAGGCAGTGTTTTCCCTCAGTTTTACTCCGAACTACGTA TGTAGCGTATTTTGTTAGACTGCTGTGTTGTGGGTTGTGGCACACAGCAG TGGTATGTGGTATCGTATTTTTGTATTTTTATTGAATCGTTTATTTTCTT CATCTCCCTGCTTCCGAGCTTGCGGTGAGCAAGCGGTGCTGGTATGTAAA CCCATACATTGGTATTGTATGGACACTCATACATTGATATGGAAACCCGG GACACGCGCCAGCAGATGGCGGGATGGGATTCGTCCTCAGCAATGAACGA TTGATTGATTGACCCAAGGGGTTGGCCGGCCGTAGACAGCCTGGCGGCTA TTAACTTGTTTTTTTGTTGGATGACGTCGCACAGACCGCCCGTCTCCTTC ACGGCACTTTTCAACCTAGGTTGTAAATTATTCGCACACGAGGACAGCAC GAGCAGTTATATGTATGCCTCCTGTGGCCACCCTTGTATGGGCTAATCTG TGAACCTTACTCTCATTGTCTGTGTCCCAAGATGTTTCAACCTTGTCGCG CATTTGGCGTCGACGAAGAGATGCTATTTTTTGGTGGATTAAGACCCGGG GTTTGGATCCCGCCAACACCAGGAGTAACGTCGTATCACAAGGAAAGGGT GTAAATCTGGATGTAAATATAACTCCAATCATCTGTCG
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Coding sequence (CDS) from alignment at C-linearis_contig103:169353..174740-

>mRNA_C-linearis_contig103.826.1 ID=mRNA_C-linearis_contig103.826.1|Name=mRNA_C-linearis_contig103.826.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at C-linearis_contig103:169353..174740- (Chordaria linearis ClinC8C monoicous)
ATGCCTCGGCTGAGCTCCTCTCCCGCGGGAGGAGGGGACGGGAGGCTCAC
CGTCGACCCGGCAACGTCGGCGTCGGCGGCGGCGTCGGCGGCGGGGGGGC
TTCGGCTGGACGGGGTCGGCGGGGAGGTGGGCCTGGCGCAGGGGTACTTC
GGGGTGTACGACGGGCACTGCGGGCCGGAGGCGGTGCAGTTCGTGCGGGA
CCAGCTGCACGCGAGGGTGGGGGAGCACCCTTTTTTCTGGAAGATGCCTC
GGCTGAGCTCCTCTCCCGCGGGAGGAGGGGACGGGAGGCTCACCGTCGAC
CCGGCAACGTCGGCGTCGGCGGCGGCGTCGGCGGCGGGGGGGCTTCGGCT
GGACGGGGTCGGCGGGGAGGTGGGCCTGGCGCAGGGGTACTTCGGGGTGT
ACGACGGGCACTGCGGGCCGGAGGCGGTGCAGTTCGTGCGGGACCAGCTG
CACGCGAGGGTGGGGGAGCACCCTTTTTTCTGGAAGGATCCAGAGCGGGC
GATGCGCGAGGCGTTCCTGTCGCTGGACGAGAATTTCTTGGCGCTAGCGG
GGGAGAGGGACTGGTACAGCGGCACCACCGTCTTGGTTGCCTTGATGAGG
GGGAGGATCCAGAGCGGGCGATGCGCGAGGCGTTCCTGTCGCTGGACGAG
AATTTCTTGGCGCTAGCGGGGGAGAGGGACTGGTACAGCGGCACCACCGT
CTTGGTTGCCTTGATGAGGGGGAGGAAGCTTTTGATCGGGAACGTGGGCG
ACTGCGAAGCGGTCCTGTGCAGGGGCGACGACTTGGTGCACTTGTCCCCG
GTGCACAGCCCGGCCAGGCCCTGCGAGAACGAGAGGATTCTAGCGGCCAA
CGGATGGGTCACCACGGAAAGGGAAGCTTTTGATCGGGAACGTGGGCGAC
TGCGAAGCGGTCCTGTGCAGGGGCGACGACTTGGTGCACTTGTCCCCGGT
GCACAGCCCGGCCAGGCCCTGCGAGAACGAGAGGATTCTAGCGGCCAACG
GATGGGTCACCACGGAAAGGGAGCTGTTCTTGCGGCAGCTGAAGCAGATG
GATCTCGATGATCCGCAGATCAGAATGGCCGCCACGGAGCACGTGAGGTG
GACCACCATCACAAGGAGCTGTTCTTGCGGCAGCTGAAGCAGATGGATCT
CGATGATCCGCAGATCAGAATGGCCGCCACGGAGCACGTGAGGTGGACCA
CCATCACAAGGGTATGCGGAGAGCTGGCAGTGTCGAGATCAATCGGTGAC
AGGGACTTCAAGGGTTTCACCAAGAGGCGGCTGGAACAGGGCACGGAGGG
AGCCCCACCCCTAGACGGTATGCGGAGAGCTGGCAGTGTCGAGATCAATC
GGTGACAGGGACTTCAAGGGTTTCACCAAGAGGCGGCTGGAACAGGGCAC
GGAGGGAGCCCCACCCCTAGACATGCCGGTGCTTTTCGCCTGGCCGCACG
GACACTCGGGCGAGTTCTACGACGACCTCCTGACGGCCGAGCCGGAGTTC
GAGGAGACGGAGATCGGGCTGGACGACGAGTTTCTGTTGATGGCGTGCGA
CGGCCTATGGGACGTGCTCGGGAAGCGGGAGGCGGTGGACCACGCCAAAA
ACTTCTTCGACGAGATGCCGGTGCTTTTCGCCTGGCCGCACGGACACTCG
GGCGAGTTCTACGACGACCTCCTGACGGCCGAGCCGGAGTTCGAGGAGAC
GGAGATCGGGCTGGACGACGAGTTTCTGTTGATGGCGTGCGACGGCCTAT
GGGACGTGCTCGGGAAGCGGGAGGCGGTGGACCACGCCAAAAACTTCTTC
GACGAGGGCATGTGCTCGCAGGCCGTTGCGGAGCGCATGTGTGAGCTAGC
CTACCGCATGGGGACTTCGGACAACGTTACCGTTGTCATCGTCCAGTTCC
ACCACTTCCGCCCGTTTTGAGGCATGTGCTCGCAGGCCGTTGCGGAGCGC
ATGTGTGAGCTAGCCTACCGCATGGGGACTTCGGACAACGTTACCGTTGT
CATCGTCCAGTTCCACCACTTCCGCCCGTTTTGA
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