mRNA_C-linearis_contig103.822.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig103.822.1
Unique NamemRNA_C-linearis_contig103.822.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: D8LKD0_ECTSI (SsrA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD0_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 2.910e-79
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 1 
Query:  448 NKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKNIY 879
            ++KARRNYEILE F AGIELVGSEVKSCRMSKINMDEGFAQAK GQCFLHG+HIAECGVSNRFYQHEPRRPRRLLLHKREI+KL++KVAQKGMTVVPLKIFF+D+NRLKVEI LA GKNVRDKREDIK R+AKRDIQRI+KN Y
Sbjct:    3 HRKARRNYEILEKFVAGIELVGSEVKSCRMSKINMDEGFAQAKKGQCFLHGIHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKIFFDDNNRLKVEIGLALGKNVRDKREDIKARDAKRDIQRISKNAY 146
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A835YRQ5_9STRA (Small protein B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ5_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.910e-52
Identity = 94/149 (63.09%), Postives = 118/149 (79.19%), Query Frame = 1 
Query:  424 GPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            GP+KVIA NK+A RNYEILETFEAGIEL+G+EVKS R  + ++DEG+A AK G+C LHGVHIA    SN + QHE +RPRRLLLHKREI++L++   + G T VPL ++FN  N LK+ +ALA+GKN RDKR+DI+ REAKRD+QR  K
Sbjct:   18 GPFKVIAKNKQAYRNYEILETFEAGIELLGTEVKSARGGRCSIDEGYAAAKRGECVLHGVHIAPYATSNAYDQHEAKRPRRLLLHKREIKRLEDMTTRAGYTAVPLTLYFNHKNLLKISVALARGKNERDKRDDIQQREAKRDLQRAVK 166
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A7S4FCI8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCI8_CHRCT)

HSP 1 Score: 169 bits (429), Expect = 5.900e-47
Identity = 88/165 (53.33%), Postives = 120/165 (72.73%), Query Frame = 1 
Query:  367 LRMMMAESGAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQR 861
            L  + A S +P +   KG G  + +  N++AR+NYE+LE +EAGI LVG+EVKSCR  KIN+ +G+ Q K+G+C+L  VHIA    S  F+QH+  R RRLLL+KREIRKL   V QKG+T+VP+K +FN  NRLK++IALA+GKNV DKR+ IK R+  R+++R
Sbjct:   12 LASLCAMSRSPVIMMAKGTGVARDVTLNRQARQNYELLEEYEAGISLVGTEVKSCRAGKINLRDGYCQIKDGECWLRNVHIARHQFSGTFFQHDETRSRRLLLNKREIRKLDAAVQQKGLTIVPVKAYFNCDNRLKLQIALARGKNVADKRDTIKQRDTDREVKR 176
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A7S2S2R4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2R4_9STRA)

HSP 1 Score: 169 bits (427), Expect = 6.150e-46
Identity = 94/193 (48.70%), Postives = 125/193 (64.77%), Query Frame = 1 
Query:  292 RGWCVGGATGLRRRDLTGGVAFKGELRMMMAESGAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            RGWC GG            VA   EL      +    V     K  Y+V++ NK+ARRNYE LE  EAGI LVG+EVK+ R  +I+M +GFAQ K G+C+L  VHI     S  F+QHE RR R+LLLHK +IRK  ++V  K +T+VP+K +FN+ NRLK+++ALA+GKN RDKREDI+ R+A R+++R  K
Sbjct:   45 RGWCGGG-----------NVARPAELSAAGRPARRAVVLAAAKKTNYRVVSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIK 226
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A7S3EVW1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EVW1_9EUKA)

HSP 1 Score: 166 bits (421), Expect = 1.440e-45
Identity = 83/148 (56.08%), Postives = 114/148 (77.03%), Query Frame = 1 
Query:  427 PYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            P K +A N+ ARRNYEIL+ FEAGI L+G+EVKSCR +++ + +G+ + K+G+C+L  VHIA+ G +  F+QHE  RPRRLLLHKREIRKL+++  Q+G+T+VPL+ +FN+ NR+KVEI LA+GK   DKR  IK R+ KR+I R  K
Sbjct:   44 PSKQVAVNRLARRNYEILDDFEAGISLLGTEVKSCRANQMQLRDGYCRIKDGECWLMNVHIAKHGTTGAFFQHEETRPRRLLLHKREIRKLEKESEQRGLTIVPLRCYFNEQNRMKVEIGLAKGKKNEDKRATIKERDQKREISRQLK 191
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A7S2S2L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2L9_9STRA)

HSP 1 Score: 164 bits (415), Expect = 3.270e-45
Identity = 82/147 (55.78%), Postives = 111/147 (75.51%), Query Frame = 1 
Query:  430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            Y+V + NK+ARRNYE LE  EAGI LVG+EVK+ R  +I+M +GFAQ K G+C+L  VHI     S  F+QHE RR R+LLLHK +IRK  ++V  K +T+VP+K +FN+ NRLK+++ALA+GKN RDKREDI+ R+A R+++R  K
Sbjct:    2 YRVFSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIK 148
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: K9FEP1_9CYAN (SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9FEP1_9CYAN)

HSP 1 Score: 160 bits (404), Expect = 1.670e-43
Identity = 84/156 (53.85%), Postives = 117/156 (75.00%), Query Frame = 1 
Query:  406 KKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKN 873
            KK +    +KV+A+N++AR  YEIL+++EAGIEL G+EVKS R  K+N+ +G+AQ KNG+ +L  VHI+   ++N+ Y HEPRRPRRLLLHK EIRKL  KV +KG+T+VPLK++     R+KV IA+ +GK + DKRE +K ++ KRDI R+ KN
Sbjct:    6 KKSQPSDGFKVMADNRQARFTYEILDSYEAGIELKGTEVKSIRAGKVNLRDGYAQVKNGEVWLLNVHISPHDMTNQAYNHEPRRPRRLLLHKAEIRKLIGKVEEKGLTLVPLKLYLK-KGRVKVNIAIGRGKKLHDKRESLKQKQEKRDIARMMKN 160
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: UPI0016841931 (SsrA-binding protein SmpB n=2 Tax=Leptolyngbya TaxID=47251 RepID=UPI0016841931)

HSP 1 Score: 157 bits (396), Expect = 2.050e-42
Identity = 81/148 (54.73%), Postives = 112/148 (75.68%), Query Frame = 1 
Query:  430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAKN 873
            YKV+A+N++AR  YEILETFEAGIEL G+EVKS R  K+N+ +GFA  +NG+ +LH VHI+    +N+ Y H+PRR RRLLLH  EIR+L  +V QKG+T+VPLK+       +K+ + LA+GK + DKRED+K ++AKR+I+R+ KN
Sbjct:    8 YKVVADNREARFQYEILETFEAGIELRGTEVKSIRQGKVNLRDGFALVRNGEVWLHNVHISPHETTNQVYNHDPRRTRRLLLHAEEIRRLIGQVEQKGLTLVPLKMHLK-RGWIKLSLGLARGKKLHDKREDLKRKQAKREIERVIKN 154
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: A0A6M8B3Q8_9CYAN (SsrA-binding protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M8B3Q8_9CYAN)

HSP 1 Score: 156 bits (395), Expect = 2.780e-42
Identity = 80/147 (54.42%), Postives = 114/147 (77.55%), Query Frame = 1 
Query:  430 YKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            YKV+A N++AR  YEILETFEAGIELVG+EVKS R  K N+ +GFA  +NG+ +LH VHI+    +++++ H+PRR R+LL+H++EIRKL  KV Q+G+T+VPLK++      +KV +ALA+GK + DKRED+K ++AKR++QR  K
Sbjct:    8 YKVVAENRQARFEYEILETFEAGIELVGTEVKSVRAGKANLRDGFALIRNGEVWLHNVHISPHDTASQYFNHDPRRTRKLLMHRQEIRKLIGKVEQQGLTLVPLKMYLK-RGWVKVSLALARGKKLHDKREDLKQKQAKREMQRAMK 153
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BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Match: F0Y4W0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4W0_AURAN)

HSP 1 Score: 155 bits (393), Expect = 3.990e-42
Identity = 79/144 (54.86%), Postives = 108/144 (75.00%), Query Frame = 1 
Query:  439 IANNKKARRNYEILETFEAGIELVGSEVKSCRMSKINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREIRKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVREAKRDIQRIAK 870
            +A+N+KAR +Y ++ T EAGI L G+EVKSCR + +N+ +GFA+ + G  +LH V IA    + R++QHE +  RRLLLHK EIRKL  ++A +G T+VPL  +FND N LKVE+AL +GKNVRDKR+DIK R+ KR +QRI+K
Sbjct:    1 VASNRKARFDYHVVRTMEAGIALTGTEVKSCRNNNVNLRDGFARVEGGSVWLHNVDIAPHATTARYFQHEAKAKRRLLLHKAEIRKLDGELADQGSTLVPLAFYFNDKNLLKVELALCKGKNVRDKRQDIKERDDKRMMQRISK 144
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKD0_ECTSI2.910e-7988.19SsrA-binding protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YRQ5_9STRA1.910e-5263.09Small protein B n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S4FCI8_CHRCT5.900e-4753.33Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S2S2R4_9STRA6.150e-4648.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3EVW1_9EUKA1.440e-4556.08Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2S2L9_9STRA3.270e-4555.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K9FEP1_9CYAN1.670e-4353.85SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxI... [more]
UPI00168419312.050e-4254.73SsrA-binding protein SmpB n=2 Tax=Leptolyngbya Tax... [more]
A0A6M8B3Q8_9CYAN2.780e-4254.42SsrA-binding protein n=4 Tax=Cyanobacteria TaxID=1... [more]
F0Y4W0_AURAN3.990e-4254.86Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:117421..122248 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.0
Seed ortholog evalue3.9e-65
Seed eggNOG ortholog2880.D8LKD0
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.SmpB protein
EggNOG OGs2S5AD@2759,COG0691@1
Ec32 ortholog descriptionSmall protein B
Ec32 orthologEc-05_001240.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1421
Cds size795
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927375.7360697-UTR-C-linearis_contig103:117420..1175101622927375.7360697-UTR-C-linearis_contig103:117420..117510Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 117421..117510 +
1690879662.9074225-UTR-C-linearis_contig103:117420..1175101690879662.9074225-UTR-C-linearis_contig103:117420..117510Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 117421..117510 +
1622927375.811122-UTR-C-linearis_contig103:121712..1222481622927375.811122-UTR-C-linearis_contig103:121712..122248Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 121713..122248 +
1690879662.9717183-UTR-C-linearis_contig103:121712..1222481690879662.9717183-UTR-C-linearis_contig103:121712..122248Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 121713..122248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927375.750977-CDS-C-linearis_contig103:117510..1178721622927375.750977-CDS-C-linearis_contig103:117510..117872Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 117511..117872 +
1690879662.92116-CDS-C-linearis_contig103:117510..1178721690879662.92116-CDS-C-linearis_contig103:117510..117872Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 117511..117872 +
1622927375.764032-CDS-C-linearis_contig103:118411..1185291622927375.764032-CDS-C-linearis_contig103:118411..118529Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 118412..118529 +
1690879662.9295273-CDS-C-linearis_contig103:118411..1185291690879662.9295273-CDS-C-linearis_contig103:118411..118529Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 118412..118529 +
1622927375.7734632-CDS-C-linearis_contig103:120059..1201701622927375.7734632-CDS-C-linearis_contig103:120059..120170Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 120060..120170 +
1690879662.9377208-CDS-C-linearis_contig103:120059..1201701690879662.9377208-CDS-C-linearis_contig103:120059..120170Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 120060..120170 +
1622927375.785515-CDS-C-linearis_contig103:120954..1210401622927375.785515-CDS-C-linearis_contig103:120954..121040Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 120955..121040 +
1690879662.947477-CDS-C-linearis_contig103:120954..1210401690879662.947477-CDS-C-linearis_contig103:120954..121040Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 120955..121040 +
1622927375.798564-CDS-C-linearis_contig103:121594..1217121622927375.798564-CDS-C-linearis_contig103:121594..121712Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 121595..121712 +
1690879662.9586291-CDS-C-linearis_contig103:121594..1217121690879662.9586291-CDS-C-linearis_contig103:121594..121712Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 121595..121712 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.822.1prot_C-linearis_contig103.822.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig103 117511..121712 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig103.822.1

>prot_C-linearis_contig103.822.1 ID=prot_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=265bp
MRGISQLALLSAAVASLVASVAQGFHLLSGSRRSTAAVDLLRQHREHQRH
RRSSTAELAARGLHHSERGWCVGGATGLRRRDLTGGVAFKGELRMMMAES
GAPPVKKQKGKGPYKVIANNKKARRNYEILETFEAGIELVGSEVKSCRMS
KINMDEGFAQAKNGQCFLHGVHIAECGVSNRFYQHEPRRPRRLLLHKREI
RKLQEKVAQKGMTVVPLKIFFNDSNRLKVEIALAQGKNVRDKREDIKVRE
AKRDIQRIAKNIYD*
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mRNA from alignment at C-linearis_contig103:117421..122248+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.822.1 ID=mRNA_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4828bp|location=Sequence derived from alignment at C-linearis_contig103:117421..122248+ (Chordaria linearis ClinC8C monoicous)
CACCGCCTACCCCTTGCACAAGCATACGCAAGCAGCGCACACGTTTGCCA
AAGACCGACCTCTGGTTTGTGTGCCGGGGACAGCTAAACGATGCGAGGCA
TCTCGCAACTCGCGTTGCTCAGCGCGGCCGTGGCCAGTCTCGTAGCATCA
GTCGCGCAAGGGTTTCACTTGTTGTCAGGTAGTAGAAGAAGCACGGCTGC
GGTGGACTTGTTACGACAACACCGTGAGCACCAGCGCCACCGCCGTTCTT
CGACTGCTGAGTTAGCGGCTAGAGGGTTGCACCATAGTGAGCGTGGCTGG
TGTGTCGGTGGAGCAACTGGCCTCCGAAGGAGAGATTTAACGGGAGGAGT
AGCCTTCAAGGGGGAGCTGCGCATGATGATGGCCGAGAGCGGCGCTCCTC
CCGTCAAGAAGCAGAAGGGGAAAGGGCCGTACAAAGTCATCGCCAATAAC
AAGTGGGTGTGGGGTGGTGCGCTTGGTGGTTCGCTTGGGTGTACCGGTGT
TTTGGTGACTAGAGTCGATGAAGGGTCTTTGCAACATATGATGCTGCTTC
CGTCGATCGGGGTTGTTGAAGCATCAGCCACCTGCATCTACCTACATTAT
GGCAACTGCTCGTCAGGTGCAAGCTGTTCTGTCCCGCAGTTGGAACCTGG
CAGACCCTCGCAAAATATACCGCCACTGCTTTGTGTGTTCTTGAAAGACT
TTGAATGTGGGTTGTCTTTGTGTTGGTTCGGTGTAAAGTAGTGTTTGTAC
TGCCGTTTTAGCAAAGGCACATCTAGGTAGCCCTCCTTGCGGAGGCTAAC
TAGCGCAGTGTGCTCGACCACCATTTTGCGGGAAAGCAGAACGCAAGCAT
TCCTTGCACCAGGGTGCTTGGTGCCAGATGCGGCGGCAGCGTTAAGTCGC
GTGTTTCCCCCGCGTTTCTCTCTACAAAAGTGCGCCAAAATGGCCGCGCG
CTTGCCGTGCCTCGCCTGCCGATCTCCCTTGCCCCTTGCAGGAAAGCGAG
GCGTAACTACGAGATTCTGGAAACGTTCGAGGCCGGGATCGAGCTCGTCG
GGTCGGAGGTGAAATCGTGCCGCATGTCCAAGATCAACATGGACGAAGGC
TTTGCCCAGGTGTGGTGATATATAGATCAATAGTTGCATGCTTCTCCGCG
CCCCTTGCCCCTGATTCTTGGAGCTCGATTGCTCCGAAAAATCTACTTCT
ACATCTTGTATTCCCGCAAGGTGTGGCTACGGGAATACATACGTCTTCGC
ACCCCCTTTTCCAGATAAATATGCCGTCAGGTTTGGCACCTTCGCTGTTG
TCGAGCAATCGCTTTTATCCTCGGCCCAGGTGTGTTAACATTCCACACGA
CGCCATGGTAAGAGGGTCCAAGGCATTCCGAGCGTTTCGTGATGAAAAGT
CCCCATGTTTCTAAACAGCCCGAAACGTTCGCCGACGGGGCTGCTTTTCA
AAGGGGTCTGTGGATGCTGTTGCCTAGTCGGATTGACGCCTGGAGAAATT
CTAGGCACACACGCTACCCGGCAGGCTTGACTGTGAAGCTACTCGCCTTT
TCGTAGGGTTGGGTCTGAACCAGTACGTACTGCCAGGTCTTGTGTACTGC
TGGTAGACCGGGCCGCCAGTACTCCAGTACATACACATCTCACGTACGTC
CCTCAATACGCCTCAAGAACCAGCGGAAACCCACATATGCAGCCCGCCTC
AAAAGGAGAGAGGAGAGAGAGAGAGAGACACACACAGCACACCCCACACC
AACCACATACGCGGCGGGAGACCATAGAACAATGGACAGGTTTGTATCCT
CTGCCAGCTCGTCTGCTGCAGACCCAGGCAGTGGTGCTGATGATGCAGGG
GCTGCTGCGTCAGCAGCAGCAGCTACGTCCGCTGTGTCAGCAGAGCAGCA
GCAGCAGCAGCAGCAGCAGCCCGATGCGCCGGCAGCGCCCAACGCAGACG
ACGTGGTGGAAGTGGTTGACACCACCTTGTGCCTTGTACTTTCAACTGCT
GATTCTATGATTTTTTGCTTGGTTGTTTGCGTTTTTTATTTCTACAACGC
AGACTATAGTATTTTTCAATACTTCAGTTTCTACGGATTAGATACAACCA
TTAATTCTAACCATTTCAACTCATGCGTATGCATACGTCTCCCACGATCC
TGGAGTTTATAGGCATTGCAAAGTTTAAAATTTGTGCCACATTTCCTCGT
GTCGGAAACCAATAAATTTGCTGAAATTTGGGCGTTGTACTCGGGGTTTC
TATCGTTTTCACCCCGATAATGCCTCTGTCAGGTGGGCCAAAATCACTCA
TTTTTGATGCTCTAGTGAAGCCAAATCGCGTGAAAAGCGCCTCCGGCGGG
GCGCCTCCAGCGAACCCCCCTCACCAGCCAGGGGGGGCCGATGGGCGCGG
CGCAGCCGCGACCACGCGGCTTCGCCGCGCCACCAGTGTACTGATCGGAT
CCAGTATACAGGATCCTGACTGGCTGCGCGAGTACCCAACCCTACCTTTT
CGCCATGTCGACTACAACCTATCTCAACCCGAACACCGCTCTCAACGACG
ATATCACGCATGGCAAAAGAAGACCCCCCACCCCCCCCTAACGGCGGCGG
CTTGCTTTTGTACTCCTCTCTCCCTCCCGAACTATAAAGGCCAAGAACGG
ACAGTGCTTTCTGCACGGGGTGCACATCGCGGAATGCGGCGTGTCGAACA
GGTTTTATCAGCACGAGCCCAGACGACCCCGAAGACTCCTCCTCCACAAG
GTGAAGAAATTTCATGGCACTTTTGTTTTTTCGTTTGCCCTCCGACAATG
GCCGGCAAATCTAACCATTGTATACTTTCACTCATCATACATACACTAAA
TAAAAAAATGTGAAGACGAAAAAAAAAAAAACACTCCTCGTTCTTGATTT
TTAAACACTCACCGTGTACTGAGTGATGCTTGTGATACATGGATATGCAC
TTCGAAGTTATGTGTTTAGAAATGGAGAGCCGTTTTGTAGCCGCGGGGGC
GGTGAGGGAGTGGTTGGAGTGTCTACATCAGTCCCCCTGTTAAAAAAATA
AATTCCACAGGTTGGACGCAGACCGCTGACGTTGAAGTGCTGAGAATGAA
TGTAAATGGAGGGCTCGTGGTTTTATAGATGCAGCCACCAGATGTTCTTT
CGAGAGTTTTTTTTGGCCAAGGGTCGTGGCTCCTCTCATCGGCGGACCTG
CTTGTCCATGATCCAGAACAGAGCACGATGACGGGAGAGGAGAACACACA
AAATATAAGGTTTTCTGCTCTGTACCTGTACGCTCAAAGTATGTGTGTAC
TTCGAGTATGCATGCTGTCACTGCATGCGGTAGAAGACGTAAAGAAATGG
TGATGTTGCACGATGATGTTCTACGACGGTGTCCTACGACAATGTTCTAC
GAAAGCGTTGTTGCGTGCGGCGGCTATTTCCCGGGTGCATTGCACGCGTG
GTGCTTGTAGGTGAGTGGCATCGCTCAATGCGCTTGTTTGCTGCTGGTTT
TGCCTGTCGTGACCGTTCCGTTTCGCACTTTCAGCGAGAGATCAGGAAGC
TGCAGGAGAAGGTCGCCCAAAAGGGTATGACCGTCGTACCACTCAAGATC
TTCTTCAACGACAGCAACAGGTAAGAGAAGAGAGAAAGCGAAAGGTTCGA
CATCTATTCTTGAAGCCCCTGACCACAGTTATGAACCAAGCTACATACGG
CGTAGGAGAGGAGGCCATCCGAGATCACCTCCCCGGAAATCGATATTTCA
AATCCTCACGTTCCTCCTCCATTCAATGCCCCCGCTCCGAATAGCCCCTT
GTCTGGCCATCTCATGCCGCCCGCTAGCTCCACTCGATCGCTGGACCCCG
TTTTGAAAGAAAACCAGAAAATCAAAGACGGACCCCCCCCCCACTTTAGA
GACGGGACACGGGGCTCCATTCAGGATTGTAATGGTGTTTCGTGTAGTGA
TGCAGTGATGTGTTCTGCCCCCGTCTTGTTTTTTGAAAGAATATCAGGAA
ATCAAAGACGGAACCTCCCCACATCAGAGACGGGACTCCGTGGGGTCAAA
GCGGTAAGTACGGGGCCGGCCGAGTAGAAAAAACACCTGGAGTTTGGAAG
ATTTCCATCACCAAAAACCCTGTTGTTTTTTGTTTTTTGTGTTTTCGGAA
ACCCGGTCTGTCTTTTGTCGCAAGGCTGAAGGTGGAGATTGCGCTGGCGC
AAGGGAAGAACGTCCGAGACAAGAGAGAAGACATCAAGGTCCGAGAGGCC
AAGCGAGACATACAGAGAATAGCGAAAAACATCTACGACTAGGCGGGCGG
GCACACTCATTTGGTCATGCTGCTGCCGAGCGCGGTGTTGTGGAAGTTGC
CGCGTTAGGCAAGCGGAGTGCTCTCGAGGTTAAGTTATGGAGGTGTCGTT
AGGACAGTCCGACTACATAATATTACTTCGAAGTATGTAATCTGTGCAGG
GTGCGCGTCCGAGGGCACCTGGCGTTCGCGGCCGCGAAGCTGCTAGAAAC
TCGAAGTTGCTAGAAAAACGGGAAGGAGCTGAGCGCGTGACGTTTGGCCC
ACACAGGGGGAGAGGCGGGCCTTATGAGGTGTCTCATCACCGCGCCGGAG
AACTCGGGGATGGTCTACTCTGTACGAGTCGATAAATTAGCCATCGAACG
TACTCTGCGTTTGTTTCCCAAGCCTTCGGGTACACCATAGACTACAAGGC
GTGTCGATGTTAACGGTAGATTTAACTGCGCCTTCACCGCAACGACCGAA
TCGTCAATCATCACCATTGTGCCGTGTTGTTGTTGGATCTTCGGATTTTT
TATTTGGCTGCCAAGGACGGCGGGCGGG
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Coding sequence (CDS) from alignment at C-linearis_contig103:117421..122248+

>mRNA_C-linearis_contig103.822.1 ID=mRNA_C-linearis_contig103.822.1|Name=mRNA_C-linearis_contig103.822.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at C-linearis_contig103:117421..122248+ (Chordaria linearis ClinC8C monoicous)
ATGCGAGGCATCTCGCAACTCGCGTTGCTCAGCGCGGCCGTGGCCAGTCT
CGTAGCATCAGTCGCGCAAGGGTTTCACTTGTTGTCAGGTAGTAGAAGAA
GCACGGCTGCGGTGGACTTGTTACGACAACACCGTGAGCACCAGCGCCAC
CGCCGTTCTTCGACTGCTGAGTTAGCGGCTAGAGGGTTGCACCATAGTGA
GCGTGGCTGGTGTGTCGGTGGAGCAACTGGCCTCCGAAGGAGAGATTTAA
CGGGAGGAGTAGCCTTCAAGGGGGAGCTGCGCATGATGATGGCCGAGAGC
GGCGCTCCTCCCGTCAAGAAGCAGAAGGGGAAAGGGCCGTACAAAGTCAT
CGCCAATAACAAATGCGAGGCATCTCGCAACTCGCGTTGCTCAGCGCGGC
CGTGGCCAGTCTCGTAGCATCAGTCGCGCAAGGGTTTCACTTGTTGTCAG
GTAGTAGAAGAAGCACGGCTGCGGTGGACTTGTTACGACAACACCGTGAG
CACCAGCGCCACCGCCGTTCTTCGACTGCTGAGTTAGCGGCTAGAGGGTT
GCACCATAGTGAGCGTGGCTGGTGTGTCGGTGGAGCAACTGGCCTCCGAA
GGAGAGATTTAACGGGAGGAGTAGCCTTCAAGGGGGAGCTGCGCATGATG
ATGGCCGAGAGCGGCGCTCCTCCCGTCAAGAAGCAGAAGGGGAAAGGGCC
GTACAAAGTCATCGCCAATAACAAGAAAGCGAGGCGTAACTACGAGATTC
TGGAAACGTTCGAGGCCGGGATCGAGCTCGTCGGGTCGGAGGTGAAATCG
TGCCGCATGTCCAAGATCAACATGGACGAAGGCTTTGCCCAGGAAAGCGA
GGCGTAACTACGAGATTCTGGAAACGTTCGAGGCCGGGATCGAGCTCGTC
GGGTCGGAGGTGAAATCGTGCCGCATGTCCAAGATCAACATGGACGAAGG
CTTTGCCCAGGCCAAGAACGGACAGTGCTTTCTGCACGGGGTGCACATCG
CGGAATGCGGCGTGTCGAACAGGTTTTATCAGCACGAGCCCAGACGACCC
CGAAGACTCCTCCTCCACAAGGCCAAGAACGGACAGTGCTTTCTGCACGG
GGTGCACATCGCGGAATGCGGCGTGTCGAACAGGTTTTATCAGCACGAGC
CCAGACGACCCCGAAGACTCCTCCTCCACAAGCGAGAGATCAGGAAGCTG
CAGGAGAAGGTCGCCCAAAAGGGTATGACCGTCGTACCACTCAAGATCTT
CTTCAACGACAGCAACAGCGAGAGATCAGGAAGCTGCAGGAGAAGGTCGC
CCAAAAGGGTATGACCGTCGTACCACTCAAGATCTTCTTCAACGACAGCA
ACAGGCTGAAGGTGGAGATTGCGCTGGCGCAAGGGAAGAACGTCCGAGAC
AAGAGAGAAGACATCAAGGTCCGAGAGGCCAAGCGAGACATACAGAGAAT
AGCGAAAAACATCTACGACTAGGCTGAAGGTGGAGATTGCGCTGGCGCAA
GGGAAGAACGTCCGAGACAAGAGAGAAGACATCAAGGTCCGAGAGGCCAA
GCGAGACATACAGAGAATAGCGAAAAACATCTACGACTAG
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