mRNA_C-linearis_contig103.814.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig103.814.1
Unique NamemRNA_C-linearis_contig103.814.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.450e-100
Identity = 193/340 (56.76%), Postives = 210/340 (61.76%), Query Frame = 1
Query:    1 MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLE-EGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSSDADVNTARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEA 909
            +I+ E VC TSDGWT CANDTY+SLT TLIT+AWKLVTLSVDC KSEGTTTGDALAAGI A V KHGLTGKVTA+ TDCEPSMVKMGRLL  +  V T IGCCN+RLEST++IV NGP VKKVM LARG+VTRY TSSQAADRLKQFVKTYLG +NKRVIQDV                                                                VTGS VVPF YDLRNSLEDA++DL +LPP SDA+VNTA AAVMPC                                    VLATAL PRTKI YGV ++ KADVWKLVQEEA
Sbjct:   35 LIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV----------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEA 310          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 3.620e-91
Identity = 195/481 (40.54%), Postives = 247/481 (51.35%), Query Frame = 1
Query:    1 MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDV-CTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSS-DADVNTARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFM---------AAAQAVGDAPAQELGEGADSSTT----------------------------SLITNSVRVELQAFKASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERL 1218
            M+  E+V  T+DGWT  +N++Y+SLTV  I   W+L  LS++C K  G+T G+ LA  IT+ + +HGLTG+VTA  TDCEPSMVK GRLLE G     HIGC NHR+ESTT+ V NG  +   +A AR VV RY  SSQ + RL  F+   L      V+QDV TRWWS+ +M+ RLL L  AI  HE+ D + P+L   +W VL LI PIL PF   Q  LEG KYVTGS  VP   +LRN LE A+ DL         A    A  AV+P                                     V ATA+ PR K LYG+     A VW+ V  +A                    AAQ VG  P    G+GA                                   + + V +E+ +F+ + GI ++    +G KVY DPLDWWR R  +FPHLA LARRVLAIP++QA SER+
Sbjct:   71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 4.260e-91
Identity = 208/512 (40.62%), Postives = 261/512 (50.98%), Query Frame = 1
Query:    1 MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLE-EGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSSDADVNT-ARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVGDAPAQE--------LGEG-------------------------------ADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGT---KVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296
            M+ +E V  T+DGWT   N++Y+SLTV  I   WKL  LS+DC K  GTTTG+ LAA +   V +H LTG+V A  TDCEPSM+K GRLLE +G   +HIGC NHR+ESTT+ V NG  +   + LAR +V RY  SSQ A RL Q     L  E   V+QDV TRWWST +MV RLL L  AI  HE+ D++ PLL   +W VL LI PIL PF   Q  LEG +YVTGS  +    +LR  LE A+ DL  +      +    A  AV P                                     V ATAL PR K LYG+     A VW+ V   A            A A  + PA +        LG G                               AD     L+   V +E+ AFKA+ GI+++ + K  T   KV+ +PLD WR +  ++P LA LARRVLAIP++QA+SER+FS AG  VT  R+ L     ELLV L
Sbjct:   35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVA-IVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 1.150e-85
Identity = 192/542 (35.42%), Postives = 266/542 (49.08%), Query Frame = 1
Query:    4 IKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSSDADVNTARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFM----------------------------------------------------AAAQAVGDAPA-----------------------QELGEGADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296
            +  EHV  TSDGWTP +NDTY+S T T I++ + LV L ++C+K    T G+ L   + A + ++GLTG+  AI TDCE SMVK GRLLEE +  TH+GC  HRLES T+    GPGV K +ALARGVVTRY+ SSQA+DRL+Q V   +  E K V+QDV TRWWST   + RL+ L+  I +HE  D   PLL   +W VL+L+  +L+PF   Q  LE  K VT   V P+  DL++ L++A+E L      +++ V  A+  V+ C                                    VLATAL PR+K LYG+ +   +DVW     EA                                                              A++  +   PA                       Q+    + S     + + +  E+ AFK + G+ +   +++G +V   PL+WWRV+  ++P LA+LARRVL IPA QA+SER+FS AG +VTK R  + P    L+V L
Sbjct:    1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQ-VCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAV-SWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.360e-85
Identity = 176/451 (39.02%), Postives = 240/451 (53.22%), Query Frame = 1
Query:    4 IKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLN-------DLPPSSDADVNTARAAVMPC-------------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296
            +  EHV  TSDGWT  +NDTY+  T T I++ + LV L V+C+K  G TTG+ L   + A + ++GLT +  A  TDCEPSMVK GRLLEE +  TH+GC  HRLES T+    GPGV K +ALAR VVTRY+ SSQA+DRL+Q ++  +  E K+V+QDV TRWWST + + RLL L+  I +HE  D + PLL   +W VL+++ P+ +PF  +Q   E  K VT S V+P+  DLR+ L++A+E L         +   +  DV  A   V P              VLATAL PR+K LYG+ +   +DVW+ V  EA             Q+ G + +    E A              +  A  A  G K    +   +                         RVL IPA+Q +SER+FS AG +VTK R  + P   EL++ L
Sbjct:   45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSLIPVEPA---AXXXXXXXXXXDFAAASAVPGDKQQSANASSS-----------------------TSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 3.310e-64
Identity = 125/204 (61.27%), Postives = 131/204 (64.22%), Query Frame = 1
Query:  814 VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXX-------------------------------------------FMAAAQAVGDAPAQELGEGADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296
            VLATAL PRTKILYGV ++ KADVWKLV+EEA                                                       AQAVG A   +L EGADSS   LIT+SVRVEL AFK S GIKMY+ DKEG KVYLDPLDWWRVRC DFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTT ELLVLL
Sbjct:   80 VLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 2.030e-58
Identity = 125/322 (38.82%), Postives = 174/322 (54.04%), Query Frame = 1
Query:   52 ANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDLNDLPPSSDADVNTARAAVMPC------------------------------------VLATALYPRTKILYGVGDNHKADVWKLVQEEA 909
            +NDTY++ T T I++ + LV L ++ +K  G TTG+ L   + A + ++GLTG+  A  TDCEP MVK GRLLEE +  +H+GC  HR ES T+    GPGV K +AL RGVVTRY+ SSQA++RL+Q     +  E K+V+QDV TRWWST   +                D + PLL   +W VL+L+ P+L PF   Q  LE  K VT S V  +  DLR+ L++A+E L      +++ V  A+  ++ C                                    VLATAL PR+K LYG+ +   +DVW+ V  EA
Sbjct:    5 SNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDI-VQVERKKVVQDVETRWWSTPREI----------------DSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEA 309          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A669CH32_ORENI (BED-type domain-containing protein n=4 Tax=Ovalentaria TaxID=1489908 RepID=A0A669CH32_ORENI)

HSP 1 Score: 139 bits (349), Expect = 4.160e-32
Identity = 129/454 (28.41%), Postives = 196/454 (43.17%), Query Frame = 1
Query:   28 TSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVK-HGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELK----VAIDKHEAADK----LDPLLPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMED---LNDLPPSSDADVNTARAAVMPC---------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVG-DAPAQELGEGADSSTTSLITNSVRVELQAFKASQGIKMYQLDKEGTKVYL---------DPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296
            T+D WT    ++Y+ +T   I   W L++ ++     E   T + LAA +     K H     V AI  D   ++V    +L+E        C  H L+      L  P + K ++ ARG+V     S  A+ +LKQ  K  +G    ++IQDVA RW S+  M+ RLLE +      +   E   +    LD  L   +W +L+ +  +L+P+     +L G+ YVT S + P    L  S ++   D   +N     ++ ++ +     +           ++A AL PR + L  +       +   VQ EA             Q VG +A A    +      T L T+S   +        G    +  ++   +Y          DPL WW+   T FP LANLA+  LA+PAT   SERLFS AGNIVTK R +L     E+L  L
Sbjct:  173 TTDAWTSLVTESYLGVTCHFINDNWDLLSFNLATLPVEERHTAENLAAWVEKVAEKFHISLHNVLAIVHDNASNIVAALHILKEKFGVVSYRCAGHTLQLVVNHALKDPKIDKALSAARGLVKHIRKSEPASTKLKQKQKQ-MGTAEHKLIQDVAVRWNSSYYMIERLLEQRWPVVATLSDPEVTQRGKQYLD--LKNDQWILLDELKEVLKPYEQATNVLSGQSYVTVSVLPPLLKGLLKSTQNKSFDSAAVNSFQNCAEEEILSRWQPEVSAFQADGKNVSLIAAALDPRFRKLKFLSPEDALKLQVRVQREALDLKREQRSQLQQQHVGQEASASPPTKKRSVLDTLLGTDSEEEDCNENTDQGGDGENEAVRKEVLLYFGEAPIPRDNDPLTWWKNNATRFPTLANLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFL 623          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU)

HSP 1 Score: 137 bits (344), Expect = 9.370e-32
Identity = 124/458 (27.07%), Postives = 194/458 (42.36%), Query Frame = 1
Query:    1 MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVKHGL-TGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPL------LPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDL----------NDLPPSSDADVNTARAAVMPCVLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLI-----TNSVRVELQAFKASQGIK----MYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296
            + KS+ +  T+D WT  A + Y+ +T   I+  W+L +  +     E   TG  +AA I  A+ +  +    + A+  D   ++V    +L+E      + C  H L+   +  L  P + K +  AR +V  +  S  A+ +LK   K  +G   K++IQDV+TRW ST  MV RLLE +  +    +   + P       L   +W +LE +   L+ F      L G  YVT S + P    L+ S +   E             +       +V     +    ++A AL PR + L  +    +  V   VQ  A                 +         ++ S  SL      T+S     + +  +Q I     MY  +   +K   +PL WW+     +P LA+LAR  L IPAT   SERLFS AGNI +K R +L P   ++L  L
Sbjct:   77 LTKSK-IALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILKEKRGWNSVCCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQKQ-MGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLDLKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQTTYETAPVQAFQAAASQETTACWSREVTVKDDSPDTQIIAAALDPRFRKLKFLTPEERFSVQSKVQSLASQSMQEETAKKQCATENEESITCFKRTSNGSLDSLFGCDSSTDSDSETAEQYAQNQAITNEVLMYFGEHPLSKTE-NPLSWWKSNEAKYPSLASLARSFLCIPATSTPSERLFSAAGNITSKKRASLIPEHVDMLTFL 531          
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Match: A0A1A8UYZ5_NOTFU (Uncharacterized protein (Fragment) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8UYZ5_NOTFU)

HSP 1 Score: 131 bits (330), Expect = 2.850e-30
Identity = 120/453 (26.49%), Postives = 192/453 (42.38%), Query Frame = 1
Query:   37 GWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTTTGDALAAGITAAVVK-HGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIGCCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTYLGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPL------LPAAEWTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMED---LNDLPPSSDADVNTARAAVMPC---------VLATALYPRTKILYGVGDNHKADVWKLVQEEAXXXXXXXXFMAAAQAVGDAPAQELGEGADSSTTSLITNSVRVELQAFKASQGIKM-----YQLDKEGTKVYL---------DPLDWWRVRCTDFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTAELLVLL 1296
             WT    ++Y+ +T   I   W L++ ++     E   T + LA+ +     K H     V AI  D   +MV    +LEE        C  H L+      L  P + K ++ ARG+V     S  A  +LK+  K  +G    ++IQDVA RW S+  M+ RLLE +  +    +  ++ P       L   +W +L  +  +L+P+     +L G+ YVT S + P    L  S ++   D   +N    S++ ++ +     +           ++A AL PR + L  +       +   VQ++A               VG    QE      +   S++   +  + +    ++ I        +  ++   +Y          DPL WW+   T FP LA LA+  LA+PAT   SERLFS AGNIVTK R +L     E+L  L
Sbjct:    1 AWTSLVTESYLGVTCHFINDNWDLLSFNLTTLPVEERHTAENLASWVEKVAEKFHISLHNVLAIVHDNASNMVAALHILEEKFGVVSYRCAGHTLQLVVNHALKDPKIDKALSAARGLVKHIKKSEPATIKLKEKQKQ-MGTAEHKLIQDVAVRWNSSYYMIERLLEQRWPVVATLSDPEVTPRGKQYLDLKNDQWILLGELKEVLKPYEQATNVLSGQSYVTASVLPPLLKGLLKSTQNKSFDSAAVNIFQNSAEEEIMSRWQPEVSAFQEDGKNVSLIAAALDPRFRKLKFLSPEDALKLQVRVQKDALDLKREQRSQLQQATVG----QEASASPPTKKRSVLDTLLGTDSEEEDCNENIDQGGDGENETVRKEVLLYFGEAPIPRDNDPLTWWKNNATRFPTLATLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFL 448          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7Y8_9PHAE1.450e-10056.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUY5_9PHAE3.620e-9140.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI4.260e-9140.63Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.150e-8535.42Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JJV8_9PHAE1.360e-8539.02Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JWI1_9PHAE3.310e-6461.27Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE2.030e-5838.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A669CH32_ORENI4.160e-3228.41BED-type domain-containing protein n=4 Tax=Ovalent... [more]
A0A671UN90_SPAAU9.370e-3227.07Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sp... [more]
A0A1A8UYZ5_NOTFU2.850e-3026.49Uncharacterized protein (Fragment) n=1 Tax=Nothobr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:36585..38117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.4
Seed ortholog evalue1.1e-80
Seed eggNOG ortholog2880.D7G5Z0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1296
Cds size1296
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.814.1prot_C-linearis_contig103.814.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig103 36585..38117 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927374.7711647-CDS-C-linearis_contig103:36584..373971622927374.7711647-CDS-C-linearis_contig103:36584..37397Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 36585..37397 +
1690879662.337137-CDS-C-linearis_contig103:36584..373971690879662.337137-CDS-C-linearis_contig103:36584..37397Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 36585..37397 +
1622927374.782372-CDS-C-linearis_contig103:37505..376011622927374.782372-CDS-C-linearis_contig103:37505..37601Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 37506..37601 +
1690879662.3546145-CDS-C-linearis_contig103:37505..376011690879662.3546145-CDS-C-linearis_contig103:37505..37601Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 37506..37601 +
1622927374.7916198-CDS-C-linearis_contig103:37730..381171622927374.7916198-CDS-C-linearis_contig103:37730..38117Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 37731..38117 +
1690879662.3627734-CDS-C-linearis_contig103:37730..381171690879662.3627734-CDS-C-linearis_contig103:37730..38117Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 37731..38117 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig103.814.1

>prot_C-linearis_contig103.814.1 ID=prot_C-linearis_contig103.814.1|Name=mRNA_C-linearis_contig103.814.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=432bp
MIKSEHVCTTSDGWTPCANDTYISLTVTLITTAWKLVTLSVDCRKSEGTT
TGDALAAGITAAVVKHGLTGKVTAIATDCEPSMVKMGRLLEEGDVCTHIG
CCNHRLESTTAIVLNGPGVKKVMALARGVVTRYSTSSQAADRLKQFVKTY
LGFENKRVIQDVATRWWSTCSMVARLLELKVAIDKHEAADKLDPLLPAAE
WTVLELILPILEPFRHTQTLLEGRKYVTGSFVVPFTYDLRNSLEDAMEDL
NDLPPSSDADVNTARAAVMPCVLATALYPRTKILYGVGDNHKADVWKLVQ
EEARRRRGGGGFMAAAQAVGDAPAQELGEGADSSTTSLITNSVRVELQAF
KASQGIKMYQLDKEGTKVYLDPLDWWRVRCTDFPHLANLARRVLAIPATQ
AESERLFSCAGNIVTKNRNNLAPTTAELLVLL
back to top

mRNA from alignment at C-linearis_contig103:36585..38117+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.814.1 ID=mRNA_C-linearis_contig103.814.1|Name=mRNA_C-linearis_contig103.814.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1533bp|location=Sequence derived from alignment at C-linearis_contig103:36585..38117+ (Chordaria linearis ClinC8C monoicous)
ATGATCAAGAGCGAGCACGTGTGCACCACCTCCGACGGCTGGACCCCTTG CGCCAACGACACCTACATATCGCTGACGGTCACCCTGATCACCACCGCCT GGAAGCTGGTCACTCTCTCTGTGGACTGCCGTAAGTCGGAAGGAACGACG ACAGGTGATGCTCTTGCTGCTGGTATCACAGCCGCGGTGGTGAAGCATGG TCTGACTGGCAAGGTTACTGCGATTGCTACTGACTGTGAGCCTTCTATGG TGAAGATGGGGCGCCTTCTCGAAGAAGGCGACGTTTGCACCCACATCGGC TGCTGCAACCACCGGCTTGAAAGCACCACCGCCATCGTCTTGAACGGGCC GGGGGTCAAGAAGGTTATGGCCTTGGCCCGCGGCGTGGTAACGCGATACT CGACATCAAGCCAGGCGGCCGACAGGCTCAAGCAGTTTGTCAAGACTTAC CTTGGTTTTGAAAACAAGCGGGTGATCCAGGACGTGGCAACCAGGTGGTG GTCCACATGCAGCATGGTAGCGCGACTGTTGGAGCTTAAGGTAGCAATCG ACAAGCACGAGGCGGCGGACAAGCTGGACCCGCTGCTTCCGGCGGCAGAA TGGACGGTGCTTGAGCTGATATTGCCTATCCTGGAACCGTTTAGGCACAC CCAGACTTTGCTTGAGGGCCGAAAGTATGTGACGGGTAGCTTCGTCGTAC CCTTCACCTACGACCTCCGCAACAGCCTCGAAGACGCGATGGAAGACCTC AACGACTTACCGCCCAGCTCGGACGCCGACGTCAACACGGCGAGGGCGGC GGTGATGCCGTGCGTCATCGCGCTCCGAGACGATTTCATCAGCCGGTGGG GAGACGGACGCGACATCCTGACCTACGCGAAGGGCAACAGGCGGCAACCA CGTGGTTTCAAGCCTGTCCAGGTGCTAGCAACCGCACTTTACCCTCGCAC GAAGATACTATATGGAGTGGGGGATAACCACAAGGCCGACGTTTGGAAGC TCGTGCAGGAAGAGGCGGTGAAGATCGCCGTGGAAAGCCGCAATGAAGAA AAAGCTCAGGGTGCCTTGTCGCAGCAACGACCGGAAGCAGCGGCAGCAGC GGCATCATCGACCACCAGTGCAGGCGAAGAGGACTCCTCGAGAAAGCGCC GGCGCCGTGGTGGTGGTGGGTTCATGGCGGCGGCGCAAGCGGTCGGAGAC GCACCAGCCCAGGAGCTGGGCGAAGGCGCCGATAGCTCCACCACCAGCCT CATCACAAACTCGGTGCGGGTGGAGCTTCAAGCCTTCAAGGCGTCCCAAG GTATCAAGATGTACCAGTTAGACAAGGAAGGCACAAAGGTGTACCTTGAC CCCTTGGACTGGTGGCGGGTACGGTGCACAGACTTCCCGCACTTGGCCAA CCTCGCCCGCCGTGTGCTGGCGATCCCCGCCACTCAGGCAGAGTCCGAGC GTCTGTTCTCCTGCGCTGGAAACATCGTCACCAAGAATCGCAACAACTTG GCCCCCACCACCGCCGAGCTGCTCGTTCTCCTG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig103:36585..38117+

>mRNA_C-linearis_contig103.814.1 ID=mRNA_C-linearis_contig103.814.1|Name=mRNA_C-linearis_contig103.814.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2592bp|location=Sequence derived from alignment at C-linearis_contig103:36585..38117+ (Chordaria linearis ClinC8C monoicous)
ATGATCAAGAGCGAGCACGTGTGCACCACCTCCGACGGCTGGACCCCTTG
CGCCAACGACACCTACATATCGCTGACGGTCACCCTGATCACCACCGCCT
GGAAGCTGGTCACTCTCTCTGTGGACTGCCGTAAGTCGGAAGGAACGACG
ACAGGTGATGCTCTTGCTGCTGGTATCACAGCCGCGGTGGTGAAGCATGG
TCTGACTGGCAAGGTTACTGCGATTGCTACTGACTGTGAGCCTTCTATGG
TGAAGATGGGGCGCCTTCTCGAAGAAGGCGACGTTTGCACCCACATCGGC
TGCTGCAACCACCGGCTTGAAAGCACCACCGCCATCGTCTTGAACGGGCC
GGGGGTCAAGAAGGTTATGGCCTTGGCCCGCGGCGTGGTAACGCGATACT
CGACATCAAGCCAGGCGGCCGACAGGCTCAAGCAGTTTGTCAAGACTTAC
CTTGGTTTTGAAAACAAGCGGGTGATCCAGGACGTGGCAACCAGGTGGTG
GTCCACATGCAGCATGGTAGCGCGACTGTTGGAGCTTAAGGTAGCAATCG
ACAAGCACGAGGCGGCGGACAAGCTGGACCCGCTGCTTCCGGCGGCAGAA
TGGACGGTGCTTGAGCTGATATTGCCTATCCTGGAACCGTTTAGGCACAC
CCAGACTTTGCTTGAGGGCCGAAAGTATGTGACGGGTAGCTTCGTCGTAC
CCTTCACCTACGACCTCCGCAACAGCCTCGAAGACGCGATGGAAGACCTC
AACGACTTACCGCCCAGCTCGGACGCCGACGTCAACACGGCGAGGGCGGC
GGTGATGCCGTGCATGATCAAGAGCGAGCACGTGTGCACCACCTCCGACG
GCTGGACCCCTTGCGCCAACGACACCTACATATCGCTGACGGTCACCCTG
ATCACCACCGCCTGGAAGCTGGTCACTCTCTCTGTGGACTGCCGTAAGTC
GGAAGGAACGACGACAGGTGATGCTCTTGCTGCTGGTATCACAGCCGCGG
TGGTGAAGCATGGTCTGACTGGCAAGGTTACTGCGATTGCTACTGACTGT
GAGCCTTCTATGGTGAAGATGGGGCGCCTTCTCGAAGAAGGCGACGTTTG
CACCCACATCGGCTGCTGCAACCACCGGCTTGAAAGCACCACCGCCATCG
TCTTGAACGGGCCGGGGGTCAAGAAGGTTATGGCCTTGGCCCGCGGCGTG
GTAACGCGATACTCGACATCAAGCCAGGCGGCCGACAGGCTCAAGCAGTT
TGTCAAGACTTACCTTGGTTTTGAAAACAAGCGGGTGATCCAGGACGTGG
CAACCAGGTGGTGGTCCACATGCAGCATGGTAGCGCGACTGTTGGAGCTT
AAGGTAGCAATCGACAAGCACGAGGCGGCGGACAAGCTGGACCCGCTGCT
TCCGGCGGCAGAATGGACGGTGCTTGAGCTGATATTGCCTATCCTGGAAC
CGTTTAGGCACACCCAGACTTTGCTTGAGGGCCGAAAGTATGTGACGGGT
AGCTTCGTCGTACCCTTCACCTACGACCTCCGCAACAGCCTCGAAGACGC
GATGGAAGACCTCAACGACTTACCGCCCAGCTCGGACGCCGACGTCAACA
CGGCGAGGGCGGCGGTGATGCCGTGCGTGCTAGCAACCGCACTTTACCCT
CGCACGAAGATACTATATGGAGTGGGGGATAACCACAAGGCCGACGTTTG
GAAGCTCGTGCAGGAAGAGGCGGTGCTAGCAACCGCACTTTACCCTCGCA
CGAAGATACTATATGGAGTGGGGGATAACCACAAGGCCGACGTTTGGAAG
CTCGTGCAGGAAGAGGCGCGCCGGCGCCGTGGTGGTGGTGGGTTCATGGC
GGCGGCGCAAGCGGTCGGAGACGCACCAGCCCAGGAGCTGGGCGAAGGCG
CCGATAGCTCCACCACCAGCCTCATCACAAACTCGGTGCGGGTGGAGCTT
CAAGCCTTCAAGGCGTCCCAAGGTATCAAGATGTACCAGTTAGACAAGGA
AGGCACAAAGGTGTACCTTGACCCCTTGGACTGGTGGCGGGTACGGTGCA
CAGACTTCCCGCACTTGGCCAACCTCGCCCGCCGTGTGCTGGCGATCCCC
GCCACTCAGGCAGAGTCCGAGCGTCTGTTCTCCTGCGCTGGAAACATCGT
CACCAAGAATCGCAACAACTTGGCCCCCACCACCGCCGAGCTGCTCGTTC
TCCTGCGCCGGCGCCGTGGTGGTGGTGGGTTCATGGCGGCGGCGCAAGCG
GTCGGAGACGCACCAGCCCAGGAGCTGGGCGAAGGCGCCGATAGCTCCAC
CACCAGCCTCATCACAAACTCGGTGCGGGTGGAGCTTCAAGCCTTCAAGG
CGTCCCAAGGTATCAAGATGTACCAGTTAGACAAGGAAGGCACAAAGGTG
TACCTTGACCCCTTGGACTGGTGGCGGGTACGGTGCACAGACTTCCCGCA
CTTGGCCAACCTCGCCCGCCGTGTGCTGGCGATCCCCGCCACTCAGGCAG
AGTCCGAGCGTCTGTTCTCCTGCGCTGGAAACATCGTCACCAAGAATCGC
AACAACTTGGCCCCCACCACCGCCGAGCTGCTCGTTCTCCTG
back to top