prot_C-linearis_contig103.812.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig103.812.1
Unique Nameprot_C-linearis_contig103.812.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length243
Homology
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: D8LD80_ECTSI (KH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD80_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 2.020e-112
Identity = 178/211 (84.36%), Postives = 179/211 (84.83%), Query Frame = 0
Query:    1 MEVDEGVVFQAGQVES------AAAAAAAGAEDVEMGTDAAGEAEAARPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            MEVDEGVVFQAGQVE+                              ARPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRN WENIV PTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV
Sbjct:    1 MEVDEGVVFQAGQVEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNCWENIVTPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 211          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: A0A835ZET5_9STRA (RNA-binding protein PNO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET5_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.440e-87
Identity = 145/210 (69.05%), Postives = 172/210 (81.90%), Query Frame = 0
Query:    1 MEVDE---GVVFQAGQVESAAAAAAAGAEDVEMGTDAAGEAEAA-RPDFPALTAREM-GGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            MEVD+   G+ F A  V+ AA A AA  +D  MG    G+A  A +P+FP L+A+++  G K D RRIRCPPHRLTPLR SWE+IV P VEHMKLQIRFN K RNVELK+S+ TED SALQ++ADF+QAFMLGFEVQDAVALLRL+DLY+DSF+V+DVK L GDHLSRAIGR+AGQ GKTRHAIENATRTR+IVAD ++HILGSF+NI+V
Sbjct:    1 MEVDQQSQGITFHA--VDIAAEAEAADDDDAAMGEG--GQAGGAMKPNFPPLSAQQLRAGAKSDIRRIRCPPHRLTPLRASWEHIVAPVVEHMKLQIRFNPKARNVELKASQFTEDPSALQRSADFVQAFMLGFEVQDAVALLRLEDLYIDSFEVRDVKMLQGDHLSRAIGRVAGQDGKTRHAIENATRTRVIVADHRIHILGSFANIRV 206          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: A0A6T5QRH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QRH5_HETAK)

HSP 1 Score: 265 bits (677), Expect = 1.810e-86
Identity = 137/207 (66.18%), Postives = 166/207 (80.19%), Query Frame = 0
Query:    1 MEVD--EGVVFQAGQVESAAAAAAAGAEDVEMGTDAAGEAEAARPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            ME+D  EGV      VE+         +D  M T+ +G     RP+FPAL+A+EM GG ++FRRIR P HR TPLR  WENI+ P VEHMKLQIRFN KTR+VE+K+S+HTED  A+QK ADFIQAFM+GFEVQDAVALLRL+DLYVDSF+V+DVK L+GDHLSRAIGR+AGQ GKTR+AIENATRTRI+VADQ++HILGS++NI+V
Sbjct:    1 MEIDSQEGVTLSPQTVENGVQ------DDSTMETEQSGTI---RPNFPALSAQEMAGGIEEFRRIRVPAHRYTPLREQWENIMQPVVEHMKLQIRFNPKTRSVEMKTSEHTEDVGAIQKAADFIQAFMMGFEVQDAVALLRLEDLYVDSFEVKDVKALSGDHLSRAIGRVAGQDGKTRYAIENATRTRIVVADQRIHILGSYANIRV 198          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: A0A7S2XZF6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZF6_9STRA)

HSP 1 Score: 261 bits (666), Expect = 8.740e-85
Identity = 122/164 (74.39%), Postives = 147/164 (89.63%), Query Frame = 0
Query:   42 RPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            +P+FPA+ A+   GG+ +FRRIR P HR TPLR  W+NI++P VEHM+LQIRFN KTR+VELK+S+HTEDA ALQK ADF+QAF +GFEVQDAVALLRLDDLY+DSF+V+DVK L+GDHLSRAIGRIAGQ GKTRHAIENATRTR++VADQ++HILGSF+NI+V
Sbjct:   36 KPNFPAIKAKRTMGGRSEFRRIRVPAHRYTPLREQWQNIMDPVVEHMRLQIRFNPKTRSVELKTSEHTEDAGALQKAADFVQAFCMGFEVQDAVALLRLDDLYIDSFEVKDVKALSGDHLSRAIGRIAGQDGKTRHAIENATRTRVVVADQRIHILGSFANIRV 199          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: W4FJZ4_9STRA (KH domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=W4FJZ4_9STRA)

HSP 1 Score: 256 bits (654), Expect = 5.790e-83
Identity = 132/205 (64.39%), Postives = 160/205 (78.05%), Query Frame = 0
Query:    1 MEVDEGVVFQAGQVESAAAAAAAGAEDVEMGTDAAGEAEAARPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            M VDE VV  A  VE+ AA  AA   D+++            P FPAL+A+ + GGKDDFRR+R P HR TPL+N W NI+ P VEH+KLQ+R N KTR VELK+  HT+DA ALQK ADF+QA+M+GFEVQDAVALLRL+DL+VD+F+V DVK L GDHLSRAIGR+AGQ GKT++AIENATRTR+++ADQKVHILGSFSNIK+
Sbjct:    7 MHVDE-VVLSASDVEAHAAITAADDNDMDV-----------VPSFPALSAQHLDGGKDDFRRVRVPAHRYTPLKNDWPNIMKPLVEHLKLQVRMNMKTRCVELKNGPHTDDAGALQKGADFVQAYMMGFEVQDAVALLRLEDLFVDTFEVTDVKMLKGDHLSRAIGRLAGQDGKTKYAIENATRTRVVLADQKVHILGSFSNIKL 199          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: H3G8F2_PHYRM (KH domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3G8F2_PHYRM)

HSP 1 Score: 252 bits (643), Expect = 2.010e-81
Identity = 116/164 (70.73%), Postives = 144/164 (87.80%), Query Frame = 0
Query:   42 RPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            RP+FPAL+A++  GGK+DFRR+R P HR TPL+N W NI+ P VEH+KLQIR N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRI++ADQK+HILGSF+NIK+
Sbjct:   27 RPNFPALSAQQQAGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIRMNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKL 190          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: G4Z4N5_PHYSP (KH domain-containing protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=G4Z4N5_PHYSP)

HSP 1 Score: 252 bits (643), Expect = 3.190e-81
Identity = 116/164 (70.73%), Postives = 144/164 (87.80%), Query Frame = 0
Query:   42 RPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            RP+FPAL+A++  GGK+DFRR+R P HR TPL+N W NI+ P VEH+KLQIR N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRI++ADQK+HILGSF+NIK+
Sbjct:   41 RPNFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIRMNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKL 204          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: A0A6A3YBU7_9STRA (KH domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3YBU7_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.380e-81
Identity = 116/164 (70.73%), Postives = 143/164 (87.20%), Query Frame = 0
Query:   42 RPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            RP FPAL+A++  GGK+DFRR+R P HR TPL+N W NI+ P VEH+KLQIR N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRI++ADQK+HILGSF+NIK+
Sbjct:   40 RPHFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPVVEHLKLQIRMNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKL 203          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: A0A3M6VD79_9STRA (KH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD79_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.530e-81
Identity = 116/164 (70.73%), Postives = 143/164 (87.20%), Query Frame = 0
Query:   42 RPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            RP+FPAL+A++  GGK+DFRR+R P HR TPL+N W NI+ P VEH+KLQIR N KTR +ELK+S HT D  ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRI++ADQK+HILGSFSNIK+
Sbjct:   41 RPNFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIRMNTKTRCIELKNSPHTTDVGALQKAADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFSNIKL 204          
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Match: A0A067D125_SAPPC (KH domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D125_SAPPC)

HSP 1 Score: 250 bits (639), Expect = 1.130e-80
Identity = 118/163 (72.39%), Postives = 143/163 (87.73%), Query Frame = 0
Query:   43 PDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 205
            P FPAL+A+E GGGK+DFRR+R P HR TPL+N W NI+ P VEH+KLQIR N KTR +ELK+S  TEDA ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRA+GR+AGQ GKT++AIENATRTRI++ADQK+HILGSFSNIK+
Sbjct:   38 PSFPALSAQEAGGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIRMNTKTRCIELKNSPLTEDAGALQKGADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVTDVKMLKGDHLSRAVGRLAGQDGKTKYAIENATRTRIVLADQKIHILGSFSNIKL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD80_ECTSI2.020e-11284.36KH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835ZET5_9STRA1.440e-8769.05RNA-binding protein PNO1-like protein n=1 Tax=Trib... [more]
A0A6T5QRH5_HETAK1.810e-8666.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZF6_9STRA8.740e-8574.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W4FJZ4_9STRA5.790e-8364.39KH domain-containing protein n=5 Tax=Aphanomyces T... [more]
H3G8F2_PHYRM2.010e-8170.73KH domain-containing protein n=3 Tax=Peronosporace... [more]
G4Z4N5_PHYSP3.190e-8170.73KH domain-containing protein n=15 Tax=Peronosporac... [more]
A0A6A3YBU7_9STRA4.380e-8170.73KH domain-containing protein n=6 Tax=Peronosporace... [more]
A0A3M6VD79_9STRA4.530e-8170.73KH domain-containing protein n=1 Tax=Peronospora e... [more]
A0A067D125_SAPPC1.130e-8072.39KH domain-containing protein n=3 Tax=Saprolegniace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 141..212
e-value: 2.0E-15
score: 58.6
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 142..206
IPR039912Pre-rRNA-processing protein PNO1-likePANTHERPTHR12826:SF13RNA-BINDING PROTEIN PNO1coord: 29..205
NoneNo IPR availablePANTHERPTHR12826FAMILY NOT NAMEDcoord: 29..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:26848..29544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.812.1mRNA_C-linearis_contig103.812.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig103 25609..30882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig103.812.1 ID=prot_C-linearis_contig103.812.1|Name=mRNA_C-linearis_contig103.812.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=243bp
MEVDEGVVFQAGQVESAAAAAAAGAEDVEMGTDAAGEAEAARPDFPALTA
REMGGGKDDFRRIRCPPHRLTPLRNSWENIVNPTVEHMKLQIRFNRKTRN
VELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQV
QDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSF
SNIKVCPFSRTASTCCLLNAAIRQETLRWTEAAVLVLRHSKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR039912PNO1-like