prot_C-linearis_contig102.811.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.811.1
Unique Nameprot_C-linearis_contig102.811.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length124
Homology
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 2.340e-69
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 0
Query:    1 NGVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESILPLWET 120
            NGVVDAEGIALCAAVEGRREE +KLLLRRQGCNANTSTRAYANMAHDSTLPM+SNQLFQDTPLVSAFELGGFYSPRI RLLLDAGADV SRVRYEGIEGDCV+HDTPLAIAESILPLWET
Sbjct:  204 NGVVDAEGIALCAAVEGRREEFVKLLLRRQGCNANTSTRAYANMAHDSTLPMYSNQLFQDTPLVSAFELGGFYSPRITRLLLDAGADVASRVRYEGIEGDCVMHDTPLAIAESILPLWET 323          
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 1.540e-66
Identity = 105/120 (87.50%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    1 NGVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESILPLWET 120
            NGVVDAEGIALCAAVEGRREECI+LLLR QGCNAN   RAYANM HD+TLPM+SNQLF DTPLVSAFELGGFYSPRI RLLL AGADV SRVRYEGIEGDCV+HDTPL IAES LPLWET
Sbjct:  200 NGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRYEGIEGDCVMHDTPLTIAESTLPLWET 319          
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.780e-66
Identity = 113/124 (91.13%), Postives = 115/124 (92.74%), Query Frame = 0
Query:    1 NGVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESILPLWETEWDA 124
            NG VDAEGIALCAAVEGRREECIKLLL      ANTSTRAYANMAHDSTLPM+SNQLFQDTPLVSAFELGGFYSPRI RLLLDAGADV SRVRYEGIEGDCV+HDTPLAIAESILPLWETEWDA
Sbjct:  206 NGAVDAEGIALCAAVEGRREECIKLLL------ANTSTRAYANMAHDSTLPMYSNQLFQDTPLVSAFELGGFYSPRITRLLLDAGADVASRVRYEGIEGDCVMHDTPLAIAESILPLWETEWDA 323          
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.640e-30
Identity = 67/117 (57.26%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    2 GVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRY-----EGIEGDCVIHDTPLAIAES 113
            GVVD EG+ALCAA+EG  E C+ LLLRRQG N N STRAY NMAH +    + + +FQ+TPLVS F LG F++PR ARLLL+AGAD  S VR+     EG E +  I  TPL +A S
Sbjct:  216 GVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFI-GTPLELATS 331          
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 8.280e-21
Identity = 66/164 (40.24%), Postives = 79/164 (48.17%), Query Frame = 0
Query:    2 GVVDAEGIALCAAV-----------------------------------------------EGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRY-----EGIEGDCVIHDTPLAIAES 113
            GVVD EG+ALCAA+                                               EG  E C+ LLLRRQG NANT TRAY NM H +    +   +FQ+TPLVS F LG F++P  ARLLL+AGAD  S VR+     EG E +  I  TPL +A S
Sbjct:  223 GVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFI-GTPLDLATS 385          
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.150e-15
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 0
Query:    2 GVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESIL 115
            GV+D +G ALC A+EGR E C+KLL+ R+G + +   R Y N+ +            ++ PL+ AF  G  ++PRI R LLD GAD +++VR+ GIEG   + D PL  A+  L
Sbjct:  248 GVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRF-GIEGLGEMIDEPLVAAKITL 349          
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 7.460e-15
Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = 0
Query:    2 GVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESILPLWETEWD 123
            GV D +G ALC A+EGR E C+KLL+ R+G NA+ +   Y N   DS           D  LV AF  G  Y+PR+ R LLD GAD + +VR+E I+G   I   PL  A+ IL   +T ++
Sbjct:  235 GVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNT--DSAC---------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFE-IKGLGEIAGGPLVAAKIILRHEQTHFE 344          
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.250e-5
Identity = 44/110 (40.00%), Postives = 48/110 (43.64%), Query Frame = 0
Query:    2 GVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIA 111
            GVVD  G AL  A E  REE +K LL+ Q          Y N   D          F  TPLV   E  G  SPRIAR L+D GAD +S V            DTPL  A
Sbjct:  237 GVVDT-GRALVVAAEYSREESVKFLLQHQAGGGTW----YVNNTLDP---------FGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFA 332          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5K1W5_9PHAE2.340e-6995.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNS0_9PHAE1.540e-6687.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE1.780e-6691.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHQ8_9PHAE2.640e-3057.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5L0_9PHAE8.280e-2140.24Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSL5_9PHAE2.150e-1541.23Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
D8LP44_ECTSI7.460e-1542.62EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G1U9_ECTSI1.250e-540.00EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..115
e-value: 1.1E-8
score: 36.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 10..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:599664..600035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.811.1mRNA_C-linearis_contig102.811.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 599664..600037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.811.1 ID=prot_C-linearis_contig102.811.1|Name=mRNA_C-linearis_contig102.811.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=124bp
NGVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTL
PMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGD
CVIHDTPLAIAESILPLWETEWDA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf