prot_C-linearis_contig102.791.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.791.1
Unique Nameprot_C-linearis_contig102.791.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length273
Homology
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: D7FH15_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH15_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 1.070e-111
Identity = 171/230 (74.35%), Postives = 185/230 (80.43%), Query Frame = 0
Query:   44 FDIESSI---TSNVRERQ---QQQQHRRVAVRPSRGLQIAKPTPFEPITDPFAFVCDMVGRPKFGHQYVLCPDRCRKRGDRGVGLSVGPHWAGVIYTMSIIGVITLFLAKVLVGPDVAPWCQPVIAGCSFVTVIFLLATAVADPGIVVESAEXXXXXXXXXXEECSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSFLMVVMPWVNSHK 267
            FDIESS    +  VRE     Q     R   RPSRG+Q+A P PFEPITDPFAFVC+M  RPKFGHQYVLCP+R R+RGDR VGLSVGPHWAGVIYT+S+I VITLFL +VL+GP+VAPWCQPVI  CS VTV+FLLATAVADPGIVVESAE          EECSIW PQGAEHXXXXXXXIFGLDH  PWMGKCVGRGNI+WFRLFNG WILFLSFLMV MPW+NSHK
Sbjct:   34 FDIESSSFGGSGTVREXXXXXQDHTRDRAVSRPSRGIQVATPAPFEPITDPFAFVCEMARRPKFGHQYVLCPERSRRRGDRRVGLSVGPHWAGVIYTISMIFVITLFLVRVLIGPNVAPWCQPVIVACSMVTVVFLLATAVADPGIVVESAESEGASCGYC-EECSIWRPQGAEHXXXXXXXIFGLDHXXPWMGKCVGRGNILWFRLFNGSWILFLSFLMVAMPWINSHK 262          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: A0A6V1ME69_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ME69_HETAK)

HSP 1 Score: 128 bits (321), Expect = 1.970e-32
Identity = 71/179 (39.66%), Postives = 92/179 (51.40%), Query Frame = 0
Query:   86 TDPFAFVCDMVGRPKFGHQYVLCPDRCRKRGDRGVGLSVGPHWAGVIYTMSIIGVITLFLAKVLVGPDVAPWCQPVIAGCSFVTVIFLLATAVADPGIV----VESAEXXXXXXXXXXEECSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSFLMVVM 260
            TDPF F+C   G P  G+ Y+L     R   D    ++VGPHW+G ++T  II   T FLA ++ G   A        GCS  +   L   A  DPGIV      +A           ++CSI+ P+GA H       I G DHHCPWMGKC+GRGNI +F LFN  W  +L FL  ++
Sbjct:   55 TDPFYFICKRFGFPMLGNNYIL-----RTTDDGDPRMTVGPHWSGTVFTTVIILSGTYFLAPLVWGRPAALAATAFFFGCSTAS---LWLVACTDPGIVRRATAPAAAAAAADGLRFCDKCSIYQPEGAVHCNDCGVCIEGHDHHCPWMGKCLGRGNICYFWLFNASWFFYLLFLFYII 225          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: A0A7R9Y9J1_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.310e-19
Identity = 59/192 (30.73%), Postives = 90/192 (46.88%), Query Frame = 0
Query:   86 TDPFAFVCDMVGRP-KFGHQYVLCPDRCRKRGDRGVGLSVGPHWAGVIYTMSII-GVITLFLAK-VLVGPDVAPWCQPVIAGCSFVTVIFLLATAVADPGIVVESA----EXXXXXXXXXXEECSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSFLMVVMPWVNSHKGTK 270
            +DP AF C ++    K GHQYVL       R D    ++ GPHW+G ++  ++I GV+  F  +   +G         +  G   +T + L  TA +DPGI+ + A    +          + C +W P G +H       I   DHHC WMGKCVG+GN+  F  FN  W+    +L + +  + S    +
Sbjct:   47 SDPLAFACRLLPCVNKLGHQYVLLT-----RADGRPLVTFGPHWSGTLFAQAVIVGVVWGFTKQHTPIGKSAVASAGMMFFG--LLTTVLLWITAGSDPGILRKHAALRDDEDAAEDDVYCDICDMWGPPGTKHCRECGVCILKHDHHCVWMGKCVGQGNMRSFIYFNMAWVSAFMYLFLCLGLLASRAKAR 231          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: A0A3R6XQH8_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XQH8_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.500e-18
Identity = 58/189 (30.69%), Postives = 80/189 (42.33%), Query Frame = 0
Query:  117 DRGVGLSVGPHWAGVIYTMSIIGVITL-----------FLAKVLVGPDVA------PWCQPVIAGCSFVTVIFLLATAVADPGIV---------------------VESAEXXXXXXXXXXEECSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSFLMVV-MPWVNSH 266
            +R   + VGPHW GV+ T+S+I V T+           F + V    DVA       W   +       T  FL  T   DPGIV                     + S            + C +   +  EH       I   DHHCPWMGKC+G+ N+ WF+LFN  W+L+L F++VV M   ++H
Sbjct:   12 ERAPFILVGPHWIGVLVTLSLIVVSTVLFIGQQYAVLHFQSHVAYSHDVARCRGLDAWYTCLSVFMCIATTYFLFKTTCTDPGIVPRGTLHTDPALISRCSYCGGDLRSLSTARLIQLLIIDICDVHQSRHTEHCDDCGVCIEKYDHHCPWMGKCIGKANMKWFQLFNLAWVLYLVFVLVVTMQNASAH 200          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: A0A7S2IEB6_9STRA (Palmitoyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IEB6_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.390e-17
Identity = 57/184 (30.98%), Postives = 82/184 (44.57%), Query Frame = 0
Query:  102 GHQYVLCPDRCRKRGDRGVGLSVGPHWAGVIYTMSIIGVITLFLAKVLVGPDVAPWCQPVIAGCSFVTV---IFLLATAVADPGIVVESAEXXXXXXXXXXEE------CSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSF----LMVVMPWV-NSHKGTKE 271
            G   VLCP         G+G+ VGPHW G I T  ++   + F  +  +G D   W    +A C F TV   + L+  A  DPG++    +           +      CS++ P  A H       + G DHHCPWMG C+G+ N+  F  FN  W+L+L +    + +  P V   H G  E
Sbjct:  264 GDTTVLCPTLYNYN---GLGV-VGPHWCGTICTFGLLWGASYFYIQKTLGDDELGWMT--LATCVFFTVWSSVSLVRVAFKDPGVITRERQVGIENEGRDLSQWRYCDICSVYQPPDAAHCPDCNVCVEGYDHHCPWMGTCIGKRNMSAFVTFNFSWLLWLLYAVFWITIAGPNVMKRHSGGGE 441          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: K8Z302_NANGC (Palmitoyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z302_NANGC)

HSP 1 Score: 90.5 bits (223), Expect = 2.780e-17
Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 0
Query:  123 SVGPHWAGVIYTMSIIGVIT-LFLAKVLVGPDVAPWCQPVIAGCSFVTVIFLLATAVADPGIVVESAEXXXXXXXXXXEECSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSFLMVVMPWVNSHKG 268
            +VGPHWAGV++T+ ++ + + LF++ V V   + P+   V    + +T++ LL TA  DPG++  S              C ++T   A H       I G+DHHCPWMG CVG GN+  F  FN  W+ ++ F++  +   +   G
Sbjct:  206 TVGPHWAGVVFTVFLVCLASFLFISHVCV--PLGPFFVLVAGVYTGLTLLTLLRTACLDPGLITRSVPPSLPRRKYC-SICRLYTGPTARHCEDCGVCIEGMDHHCPWMGHCVGSGNMGAFLCFNCVWLTYVLFVLACLAAQSGVFG 349          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: A0A2P4YE67_9STRA (Palmitoyltransferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YE67_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 8.350e-17
Identity = 53/181 (29.28%), Postives = 83/181 (45.86%), Query Frame = 0
Query:  124 VGPHWAGVIYTMSIIGVIT-LFLAKVLVGPDVAPWCQPVIA-GCSFVTVIFLLATAVADPGIVVESAEXXXXXXXXXXEE---------------------------CSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSFLMVV----MPWVNSHKGTKE 271
            VGPHW GV+ T++II V T +FL++ +       W + +I  G   +T+ +L  T   DPGIV  S +          E                            CSI   +  +H       + G DHHCPWMGKC+GRGN+  F++FN  W++++ F++ +    + W  +   T +
Sbjct:   99 VGPHWIGVLVTLAIILVATSMFLSQHV---QTMSWYETLITLGLCGMTLYYLYQTTCTDPGIVQSSKQKDVSQTDDENEVSELEAGQLPVEAFGPPRRSSRRRYCDICSIEQDRTTDHCEDCGVCVAGYDHHCPWMGKCIGRGNMHAFKMFNVSWVIYVCFVLFIAITSVDWGQAAVQTLQ 276          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: A0A3R7ML61_9STRA (Palmitoyltransferase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7ML61_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.130e-16
Identity = 49/138 (35.51%), Postives = 69/138 (50.00%), Query Frame = 0
Query:  124 VGPHWAGVIYTMSIIGVIT-LFLAKVLVGPDVAPWCQPVIA-GCSFVTVIFLLATAVADPGIVVESAEXXXXXXXXXXEECSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSFLMVV 259
            VGPHW GV+ T+ II V + +FL +      V PW    +  G   +T+ +L  T   DPGIV  S +           E      Q             G DHHCPWMGKC+G+GN+  F++FN  W+L++ F++ V
Sbjct:   24 VGPHWIGVLVTLCIIIVSSGMFLVQQY---PVMPWYYTAMTFGLCGMTLYYLFLTTCTDPGIVRPSRQKDLALDETESSELEAGQLQNGNGVEA------GYDHHCPWMGKCIGKGNMYAFKMFNVSWVLYVVFVLFV 152          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: A0A7S2GXV6_9STRA (Palmitoyltransferase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXV6_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.560e-16
Identity = 54/166 (32.53%), Postives = 77/166 (46.39%), Query Frame = 0
Query:   84 PITDPFAFVCDMVGRPKFGHQYVLCP-DRCRKRGDRGVGLSVGPHWAGVIYTMSIIGVITLFLAKVLVGPDVAPWCQPVIAGCSF--VTVIFLLATAVADPGIVVESAEXXXXXXXXXXEECSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFN 246
            P  DP + VC+ +   +  + YVL   D+ R      + + VGPHWAG+  T SI+    L  +   +           +    F  VT+ FL  T  +DPGIV  S            + C +  P  A H       +  LDHHCPW+GKC+G+GN+ WF+ FN
Sbjct:   73 PSGDPCSKVCEHLRISRLANSYVLLQLDKPR------LLILVGPHWAGLASTTSIV----LLSSVAFISFQTLHSTGLTVIAIIFCVVTLTFLFLTGCSDPGIVRTSFVSESGQTPCFCDVCGVNQPPDAMHCDECGCCVEELDHHCPWIGKCIGKGNMRWFKAFN 228          
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Match: A0A835ZD98_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD98_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.280e-16
Identity = 58/175 (33.14%), Postives = 87/175 (49.71%), Query Frame = 0
Query:   87 DPFAFVCDMVGRPKFGHQYVLCPDRCRKRGDRGVGLSVGPHWAGVIYTMSIIGVITLFLAKVLV---GPDVAPWCQPVIAGCSFVTVIFLLATAVADPGIVVESAEXXXXXXXXXXEECSIWTPQGAEHXXXXXXXIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWILFLSFLMV 258
            DP   +C  +  PK GH YVL       R  + + L++GPHW GV++  ++    TL     L+   GP    W +      + +T++ L  T  +DPGIV + A            EC++  P  AEHXXXXXXX         WMGKC+G+ N+  F++FN  W+ +L   ++
Sbjct:    1 DPCRCLCSWLRAPKIGHNYVLARTPGSLRSSKLL-LTMGPHWTGVLFASAV----TLGATVALIIQDGPQGTNWFKWFCVSGAGLTLLTLWLTGCSDPGIVRQPANADMDARMCP--ECAMMVPGTAEHXXXXXXXXXXXXXXXIWMGKCIGKQNMTIFKVFNVTWVAYLVVSLI 168          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH15_ECTSI1.070e-11174.35Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6V1ME69_HETAK1.970e-3239.66Palmitoyltransferase n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9Y9J1_9STRA2.310e-1930.73Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A3R6XQH8_9STRA2.500e-1830.69Palmitoyltransferase n=1 Tax=Aphanomyces astaci Ta... [more]
A0A7S2IEB6_9STRA2.390e-1730.98Palmitoyltransferase n=1 Tax=Helicotheca tamesis T... [more]
K8Z302_NANGC2.780e-1733.33Palmitoyltransferase n=3 Tax=Monodopsidaceae TaxID... [more]
A0A2P4YE67_9STRA8.350e-1729.28Palmitoyltransferase n=1 Tax=Phytophthora palmivor... [more]
A0A3R7ML61_9STRA1.130e-1635.51Palmitoyltransferase n=2 Tax=Phytophthora kernovia... [more]
A0A7S2GXV6_9STRA1.560e-1632.53Palmitoyltransferase (Fragment) n=1 Tax=Dictyocha ... [more]
A0A835ZD98_9STRA5.280e-1633.14Palmitoyltransferase n=1 Tax=Tribonema minus TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 198..259
e-value: 1.6E-18
score: 67.1
NoneNo IPR availablePANTHERPTHR22883:SF239coord: 122..259
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 122..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 180..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..263
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 161..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 264..272
NoneNo IPR availablePROSITEPS50216DHHCcoord: 197..245
score: 22.394
NoneNo IPR availableTMHMMTMhelixcoord: 239..261
NoneNo IPR availableTMHMMTMhelixcoord: 156..178
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:405134..407049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.791.1mRNA_C-linearis_contig102.791.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 404995..407899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.791.1 ID=prot_C-linearis_contig102.791.1|Name=mRNA_C-linearis_contig102.791.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=273bp
MSYKEDALPLLIENEAQQRHQQGFGEDEGDQHPHGILPPPMSSFDIESSI
TSNVRERQQQQQHRRVAVRPSRGLQIAKPTPFEPITDPFAFVCDMVGRPK
FGHQYVLCPDRCRKRGDRGVGLSVGPHWAGVIYTMSIIGVITLFLAKVLV
GPDVAPWCQPVIAGCSFVTVIFLLATAVADPGIVVESAESGESGTCGYCE
ECSIWTPQGAEHCEECGVCIFGLDHHCPWMGKCVGRGNIVWFRLFNGCWI
LFLSFLMVVMPWVNSHKGTKEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC