prot_C-linearis_contig102.780.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.780.1
Unique Nameprot_C-linearis_contig102.780.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length282
Homology
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: D7FH27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH27_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 2.840e-115
Identity = 198/283 (69.96%), Postives = 218/283 (77.03%), Query Frame = 0
Query:    1 MPLVHRKRV-ATALAFLACLATRPVADGFLLSPSFSIARKPRVPHNGSISNFAISYFQGASQHQNVVQKVQNDAQRPEELLGEVDTRPSGEKLVNRRAYFEQLLYKTVATVAISGASSLV-APPRRLLAAGLGYEEPGSRWLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVVNQILGI 281
            M LV + RV AT  AFL CLA  P  DGFLLSPS ++AR    P++G     AI+   G +  Q V++K       P+E+   +   P     +NRRAYFEQL+YK+VATVAISGASSLV AP  R  A    +EE  SRW PEGNPKEA+SWFPLL KCY+SLEDVL NWEKYT RQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEE SQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFI KA KSLKIAK+EFK VN+ILGI
Sbjct:    1 MTLVRQNRVVATIFAFL-CLAV-PSCDGFLLSPSLALARLRSAPNDGDC---AIARQPGGAASQQVLEK-------PDEMPRTLAEEPR----LNRRAYFEQLMYKSVATVAISGASSLVLAPTGRSYA----FEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFIAKANKSLKIAKDEFKEVNKILGI 263          
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A835ZH00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH00_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.600e-45
Identity = 80/145 (55.17%), Postives = 109/145 (75.17%), Query Frame = 0
Query:  139 WLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVR--QDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVVNQILGI 281
            W P G+PK A+SWFPLLK  Y +L+D+LANW+        DGDA+RR IGT+GVSSPLS+++K F++IRD+E+ ++ +ID+ ++VEAY  VLT L DAENDLYSANFAD+SGGG  KG+ FI  A+KS+  AK  F+ + + L +
Sbjct:   14 WGPTGDPKVAASWFPLLKLQYAALKDLLANWDAVAPAGSTDGDAVRRKIGTVGVSSPLSAVKKTFSAIRDSEDVAE-EIDLADFVEAYQAVLTDLSDAENDLYSANFADFSGGGQLKGTNFIKAAKKSIAAAKLNFEEILRTLQL 157          
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A7S2UXU3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.260e-32
Identity = 68/164 (41.46%), Postives = 100/164 (60.98%), Query Frame = 0
Query:  117 SLVAPPRRLLAAGLGYEEPGSRWLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVVNQILG 280
            +L++    L +A +GY      W   GNPK   +W P ++  Y+ LE ++ NW++   + +GD +RR +GT+GVSS L+S +KA   +RDA +      D IE+ E   EV+T LGDAEND YSANFA++SGGG  K +QFI KA   +K A   +K+V  ++ 
Sbjct:   77 TLISSATLLPSASIGYPPYPQAWKTSGNPKSYKTWAPQVRDGYKRLEIMVENWDEIAAKDNGDEMRRFLGTVGVSSSLTSFKKALYGVRDAVD-LPSSFDEIEWAEKAEEVVTCLGDAENDFYSANFAEFSGGGQLKSAQFIKKARPFVKKA---YKIVGGMVA 236          
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A7S4DIQ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIQ5_HETAK)

HSP 1 Score: 111 bits (277), Expect = 8.570e-26
Identity = 58/141 (41.13%), Postives = 90/141 (63.83%), Query Frame = 0
Query:  143 GNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLS--SIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVVNQILGI 281
            G P   S+W   L++  + L +VL NW+   +R +GD +R+ IGT+G  S L+  S+++AF  + +A++     +D+ EY E Y EVLTAL DAEN+ YSANFAD+SGGG  K SQFI +++K + +A+   K +  +  +
Sbjct:   95 GPPASFSTWLAQLEEGEKILVNVLQNWKDLELRDNGDEVRKFIGTVGPVSALNPVSLKRAFLKLAEADD-FPDYVDLDEYAEKYEEVLTALADAENEAYSANFADFSGGGQLKSSQFIKRSQKRIAVAQRALKEILAMFDV 234          
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A2V3IQN4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN4_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 4.340e-10
Identity = 34/104 (32.69%), Postives = 61/104 (58.65%), Query Frame = 0
Query:  143 GNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEA-YMEVLTALGDAENDLYSANFAD 245
            G+PK+  ++ P ++  Y++L  +  +WE  T   DGD +RR++GT+GV SPL +IRK          ++  D ++IE +E  + +V+  +   +  LYSA+F +
Sbjct:   14 GDPKKLETYLPQIEAGYQALLGLDRDWEAKTKDFDGDVVRRVLGTVGVKSPLFNIRKPLLKSWQIVADTSTDDELIERLETEWNDVINGISSIDFQLYSASFTE 117          
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A5J4Z903_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z903_PORPP)

HSP 1 Score: 63.2 bits (152), Expect = 3.750e-8
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 0
Query:  159 YESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDA--EEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFAD 245
            Y+ + D+  NW + T   DGD +RR +GT+G SSPL +I+KAF ++  +  E +   D D+ E  E Y  VL  +   +  LYS NF++
Sbjct:  104 YDVMLDLERNWTERTKAFDGDIVRRYLGTVGKSSPLFNIKKAFMAVWKSLSERDDVSDADLEELNEKYNLVLDGISGVDFQLYSVNFSE 192          
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A813JFT0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JFT0_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 2.250e-6
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0
Query:  154 LLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSG 248
            +L +   +L D L NW +  V  DGD+IRR++GT+G +SP+ ++ +A  S+      +  + D++E  EA   V   L  A+   YSANFAD SG
Sbjct:  124 ILSRSEAALADALKNWSR--VAADGDSIRRVLGTVGATSPVYALPRAMRSL------TAENFDILEQTEA---VEFHLRQADFLAYSANFADSSG 207          
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A7S2RCQ0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RCQ0_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.580e-5
Identity = 50/151 (33.11%), Postives = 73/151 (48.34%), Query Frame = 0
Query:  101 QLLYKTVATVAISGASSLVAPPRRLLAAGLGYEEPGSRWLPEGNPKEASSWFPLLKKCYESLEDVLANW--EKYTVRQDG-DAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSG 248
            Q L++T         +S++ P +   AA  G     +R    G  K+AS+           L+D+L NW  EK+     G DAIRR +GT G++SPL  I KAF ++RD+E       D IE+ E   E +  L  A++   S+N    SG
Sbjct:   74 QFLFQTTKMATTVATASVMLPHQACNAAAPGMTAESAR----GQWKQAST----------VLDDLLQNWSTEKWAEEVGGGDAIRRELGTQGITSPLYQIEKAFKALRDSEYVD----DFIEFQETTEEFMDGLFRADSLAASSNNKTGSG 206          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FH27_ECTSI2.840e-11569.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZH00_9STRA7.600e-4555.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UXU3_9STRA1.260e-3241.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4DIQ5_HETAK8.570e-2641.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2V3IQN4_9FLOR4.340e-1032.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z903_PORPP3.750e-838.20Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A813JFT0_POLGL2.250e-637.89Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S2RCQ0_9STRA3.580e-533.11Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..281
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.622

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:231590..235592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.780.1mRNA_C-linearis_contig102.780.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 231557..236332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.780.1 ID=prot_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=282bp
MPLVHRKRVATALAFLACLATRPVADGFLLSPSFSIARKPRVPHNGSISN
FAISYFQGASQHQNVVQKVQNDAQRPEELLGEVDTRPSGEKLVNRRAYFE
QLLYKTVATVAISGASSLVAPPRRLLAAGLGYEEPGSRWLPEGNPKEASS
WFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKA
FTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGG
GTKGSQFITKAEKSLKIAKEEFKVVNQILGI*
back to top