mRNA_C-linearis_contig102.780.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig102.780.1
Unique NamemRNA_C-linearis_contig102.780.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: D7FH27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH27_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 4.010e-111
Identity = 198/283 (69.96%), Postives = 218/283 (77.03%), Query Frame = 1 
Query:   34 MPLVHRKRV-ATALAFLACLATRPVADGFLLSPSFSIARKPRVPHNGSISNFAISYFQGASQHQNVVQKVQNDAQRPEELLGEVDTRPSGEKLVNRRAYFEQLLYKTVATVAISGASSLV-APPRRLLAAGLGYEEPGSRWLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVVNQILGI 876
            M LV + RV AT  AFL CLA  P  DGFLLSPS ++AR    P++G     AI+   G +  Q V++K       P+E+   +   P     +NRRAYFEQL+YK+VATVAISGASSLV AP  R  A    +EE  SRW PEGNPKEA+SWFPLL KCY+SLEDVL NWEKYT RQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEE SQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFI KA KSLKIAK+EFK VN+ILGI
Sbjct:    1 MTLVRQNRVVATIFAFL-CLAV-PSCDGFLLSPSLALARLRSAPNDGDC---AIARQPGGAASQQVLEK-------PDEMPRTLAEEPR----LNRRAYFEQLMYKSVATVAISGASSLVLAPTGRSYA----FEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFIAKANKSLKIAKDEFKEVNKILGI 263
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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A835ZH00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH00_9STRA)

HSP 1 Score: 157 bits (397), Expect = 5.000e-42
Identity = 80/143 (55.94%), Postives = 108/143 (75.52%), Query Frame = 1 
Query:  448 WLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVR--QDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVVNQIL 870
            W P G+PK A+SWFPLLK  Y +L+D+LANW+        DGDA+RR IGT+GVSSPLS+++K F++IRD+E+ ++ +ID+ ++VEAY  VLT L DAENDLYSANFAD+SGGG  KG+ FI  A+KS+  AK  F+ + + L
Sbjct:   14 WGPTGDPKVAASWFPLLKLQYAALKDLLANWDAVAPAGSTDGDAVRRKIGTVGVSSPLSAVKKTFSAIRDSEDVAE-EIDLADFVEAYQAVLTDLSDAENDLYSANFADFSGGGQLKGTNFIKAAKKSIAAAKLNFEEILRTL 155
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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A7S2UXU3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU3_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.510e-30
Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1 
Query:  382 SLVAPPRRLLAAGLGYEEPGSRWLPEGNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVV 858
            +L++    L +A +GY      W   GNPK   +W P ++  Y+ LE ++ NW++   + +GD +RR +GT+GVSS L+S +KA   +RDA +      D IE+ E   EV+T LGDAEND YSANFA++SGGG  K +QFI KA   +K A   +K+V
Sbjct:   77 TLISSATLLPSASIGYPPYPQAWKTSGNPKSYKTWAPQVRDGYKRLEIMVENWDEIAAKDNGDEMRRFLGTVGVSSSLTSFKKALYGVRDAVD-LPSSFDEIEWAEKAEEVVTCLGDAENDFYSANFAEFSGGGQLKSAQFIKKARPFVKKA---YKIV 231
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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A7S4DIQ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIQ5_HETAK)

HSP 1 Score: 110 bits (276), Expect = 4.770e-24
Identity = 58/135 (42.96%), Postives = 88/135 (65.19%), Query Frame = 1 
Query:  460 GNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLS--SIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKEEFKVV 858
            G P   S+W   L++  + L +VL NW+   +R +GD +R+ IGT+G  S L+  S+++AF  + +A++     +D+ EY E Y EVLTAL DAEN+ YSANFAD+SGGG  K SQFI +++K + +A+   K +
Sbjct:   95 GPPASFSTWLAQLEEGEKILVNVLQNWKDLELRDNGDEVRKFIGTVGPVSALNPVSLKRAFLKLAEADD-FPDYVDLDEYAEKYEEVLTALADAENEAYSANFADFSGGGQLKSSQFIKRSQKRIAVAQRALKEI 228
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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A2V3IQN4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN4_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 1.520e-9
Identity = 34/104 (32.69%), Postives = 61/104 (58.65%), Query Frame = 1 
Query:  460 GNPKEASSWFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEA-YMEVLTALGDAENDLYSANFAD 768
            G+PK+  ++ P ++  Y++L  +  +WE  T   DGD +RR++GT+GV SPL +IRK          ++  D ++IE +E  + +V+  +   +  LYSA+F +
Sbjct:   14 GDPKKLETYLPQIEAGYQALLGLDRDWEAKTKDFDGDVVRRVLGTVGVKSPLFNIRKPLLKSWQIVADTSTDDELIERLETEWNDVINGISSIDFQLYSASFTE 117
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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A5J4Z903_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z903_PORPP)

HSP 1 Score: 63.2 bits (152), Expect = 1.320e-7
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 1 
Query:  508 YESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDA--EEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFAD 768
            Y+ + D+  NW + T   DGD +RR +GT+G SSPL +I+KAF ++  +  E +   D D+ E  E Y  VL  +   +  LYS NF++
Sbjct:  104 YDVMLDLERNWTERTKAFDGDIVRRYLGTVGKSSPLFNIKKAFMAVWKSLSERDDVSDADLEELNEKYNLVLDGISGVDFQLYSVNFSE 192
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BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Match: A0A813JFT0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JFT0_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 7.730e-6
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 1 
Query:  493 LLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSG 777
            +L +   +L D L NW +  V  DGD+IRR++GT+G +SP+ ++ +A  S+      +  + D++E  EA   V   L  A+   YSANFAD SG
Sbjct:  124 ILSRSEAALADALKNWSR--VAADGDSIRRVLGTVGATSPVYALPRAMRSL------TAENFDILEQTEA---VEFHLRQADFLAYSANFADSSG 207
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FH27_ECTSI4.010e-11169.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZH00_9STRA5.000e-4255.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UXU3_9STRA2.510e-3042.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4DIQ5_HETAK4.770e-2442.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2V3IQN4_9FLOR1.520e-932.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z903_PORPP1.320e-738.20Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A813JFT0_POLGL7.730e-637.89Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:231557..236332 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_003260.1
Exons6
Model size1619
Cds size846
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.780.1prot_C-linearis_contig102.780.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig102 231590..235592 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927369.0259984-UTR-C-linearis_contig102:231556..2315891622927369.0259984-UTR-C-linearis_contig102:231556..231589Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 231557..231589 +
1690879658.1966565-UTR-C-linearis_contig102:231556..2315891690879658.1966565-UTR-C-linearis_contig102:231556..231589Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 231557..231589 +
1622927369.1106298-UTR-C-linearis_contig102:235592..2363321622927369.1106298-UTR-C-linearis_contig102:235592..236332Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 235593..236332 +
1690879658.273115-UTR-C-linearis_contig102:235592..2363321690879658.273115-UTR-C-linearis_contig102:235592..236332Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 235593..236332 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927369.038588-CDS-C-linearis_contig102:231589..2317061622927369.038588-CDS-C-linearis_contig102:231589..231706Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 231590..231706 +
1690879658.206105-CDS-C-linearis_contig102:231589..2317061690879658.206105-CDS-C-linearis_contig102:231589..231706Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 231590..231706 +
1622927369.049532-CDS-C-linearis_contig102:231873..2321821622927369.049532-CDS-C-linearis_contig102:231873..232182Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 231874..232182 +
1690879658.2155201-CDS-C-linearis_contig102:231873..2321821690879658.2155201-CDS-C-linearis_contig102:231873..232182Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 231874..232182 +
1622927369.0601728-CDS-C-linearis_contig102:233546..2336101622927369.0601728-CDS-C-linearis_contig102:233546..233610Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 233547..233610 +
1690879658.2254364-CDS-C-linearis_contig102:233546..2336101690879658.2254364-CDS-C-linearis_contig102:233546..233610Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 233547..233610 +
1622927369.0708735-CDS-C-linearis_contig102:234200..2343431622927369.0708735-CDS-C-linearis_contig102:234200..234343Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 234201..234343 +
1690879658.235762-CDS-C-linearis_contig102:234200..2343431690879658.235762-CDS-C-linearis_contig102:234200..234343Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 234201..234343 +
1622927369.083565-CDS-C-linearis_contig102:235109..2352351622927369.083565-CDS-C-linearis_contig102:235109..235235Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 235110..235235 +
1690879658.2454433-CDS-C-linearis_contig102:235109..2352351690879658.2454433-CDS-C-linearis_contig102:235109..235235Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 235110..235235 +
1622927369.0983658-CDS-C-linearis_contig102:235505..2355921622927369.0983658-CDS-C-linearis_contig102:235505..235592Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 235506..235592 +
1690879658.2622793-CDS-C-linearis_contig102:235505..2355921690879658.2622793-CDS-C-linearis_contig102:235505..235592Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 235506..235592 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig102.780.1

>prot_C-linearis_contig102.780.1 ID=prot_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=282bp
MPLVHRKRVATALAFLACLATRPVADGFLLSPSFSIARKPRVPHNGSISN
FAISYFQGASQHQNVVQKVQNDAQRPEELLGEVDTRPSGEKLVNRRAYFE
QLLYKTVATVAISGASSLVAPPRRLLAAGLGYEEPGSRWLPEGNPKEASS
WFPLLKKCYESLEDVLANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKA
FTSIRDAEEESQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGG
GTKGSQFITKAEKSLKIAKEEFKVVNQILGI*
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mRNA from alignment at C-linearis_contig102:231557..236332+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.780.1 ID=mRNA_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4776bp|location=Sequence derived from alignment at C-linearis_contig102:231557..236332+ (Chordaria linearis ClinC8C monoicous)
AAGCAGCTCACGGAGAGGGAAAGCAGGTTCGCGATGCCTTTGGTTCACCG
GAAACGTGTGGCTACTGCGCTTGCGTTCCTCGCCTGCCTCGCGACCCGTC
CCGTCGCTGATGGCTTCCTCCTCTCCCCTTCCTTTTCGATAGCCCGAAAG
GTGCGTTGTGTGTGACGCACCCAAAAGAAAAATGATCGCCGAGAGAGCGG
GTTGCATGTAGGAGGCAGGATGCGCCATCCTATCGTGTAGCGAGAGAGGG
TTTTTAACGGTAGGGTGGCCGCATCGTTGAGGAGGTATGGAAACCGCAGC
TGATCTTTTGTCGAAAGCCTCGAGTTCCACATAACGGCAGCATTTCGAAC
TTCGCGATTTCTTACTTCCAGGGCGCATCCCAGCACCAAAACGTAGTTCA
AAAGGTTCAAAACGACGCCCAACGACCAGAGGAGCTGCTGGGCGAGGTCG
ACACGCGACCCTCCGGGGAGAAGCTCGTAAACCGACGAGCGTACTTCGAG
CAGCTGCTTTATAAGACCGTGGCAACCGTGGCAATAAGCGGGGCATCGTC
TCTGGTGGCGCCTCCGAGGCGCCTCCTTGCTGCGGGGCTGGGGTACGAGG
AGCCGGGGTCACGGTGGCTGCCCGAGGTGAAGATGAAGTTGATGTTTAGA
GGAATGAACCCCGAACACACGTACGCGTGCGCGATGTGTCGCTTTTGGAT
GCGCTTGCCCCCCCGCCGCGAGCCTGTTTTCCATCAACGGCTGCCTTGAC
CTCGGATGGAAGTTGCTCTTTACTCTCGCACCTTGGACCTGCTGTAACCA
ATTTTAATTTTGAACGTACGTGTGTTCGCTTTTTTTTTCTCCACATATAA
CCCGAGCTCGCAGCATTTCTGCCGGATAGGAGCTCTAGCCCGTGGTCACA
CAGAAGGGTTTCTCTCCCTGAGGCCCTCCACCCTCCCCTCCTGCGCGCCT
CTAATATTTAATGCGAGAAGAGCGCGGCAATCTCTTCCCTCTGTGTACAC
ACGACTAGCGCTTTCCACAACCAGGGACGTATTTGAGAGAAAAACGCTTT
TTTCGTCTTCACATCTACTTCCAGAGTTCGCAGGGGCGCCTTGCCACGAG
TGAACCTGCTGGCTACCGTGAGACCACTATAGTAGACCGCCGGGGCGACG
TTTGGATATCAAATGGTAGTAAAAACGGTGCGGGCGGGCTGTTGTTTGAG
TGGCTTAGACCAGGATCACACCGAGACGCTCGAACATCCCCCCGCCTTGT
GCTTCGGGCGGCACCGGTCGTGTGTGTCTTCATGGATGTCGCATTGAGCC
CGTGCTGGGTCCAGAGGTGGATGCGTGGCCTGTACACTGCTGTATGTATT
CTGCGCGTTTTGCATAATGCAGTGCGCTGGAGCTGCCGTTGGGCACCAAC
TCTCACTTGATCCACGCAACGGGGATCGACGCTCCCCCCACCCCGGAGTC
TGTTCGTTTCTCCCGACCAAACCTTGTTGAAGCTAGCTTTGGTATCCAGC
TTGCCGGAAGATGGCATTGCCCAGATCCTCTGTGTGTCCCTCGACCCGAT
GGCGTACGTGTCGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TTTTACCATGGTTTCACATAGGATGTGGTTGGTCGGAAGAAAGTTAGAAA
TTTTATTCGAGCGAAGCGCGTTTCTAATCCCCGCCTTTTTTCGCGTCTTG
TGGTCGCTGTGTCCTGGGAGCGGCGTAGCTGTGTGCACCTCTCCAATGGT
CGGTGGCTGGTCTTACAGCAGTACTTGCACCTCAAAAATTGAACAGCTGT
TCTTACGGCGAAGTTTCGAAGTTTCAGAAAGCTATTGGAAGTTCATCCCT
CCAAAGGGTAACTCGTATTGTACGTACGGTACTACTCTGTTCTGCGATAT
GTGACCCGTCTTGCGGTTTGGTACATTCCCCGCACTCATCTTCAACCCTA
CTTTTTCTGTGGCCACCGCCTGCCGCTCGCCGTGTCGCAGGGCAACCCGA
AGGAGGCTTCTTCGTGGTTCCCCCTCTTGAAAAAGTGCTACGAGTCTTTG
GAAGGTGAGGTGTTTTGTGCAGGCACTACATGAGCCGTCACAGCAGCGCA
TTTCTCCTGAACCGATATTTTGCAATACAAGCAGCACACGAAGTAGTAGG
CGTGGTCGGGTCTCACTCTTCGTCATGGGGTTTATAGTAGAGATGTAGTA
CACCCGTCTCATGCATTTAAAGCTCTTGGATGCTGCAGCAGGTTTGTGTC
AAGTATCAAGAGGATTTTTTTTTTCTCGCCCATTAATGTTTTTTCGTAGC
CTGCCTCCTCTTCTTCACTACAACTAGATAGGCTACCATCCGGGGTCACA
CAGGAGGGGATGTCTCCATCTACCTCCTGCGGTGGATTGTTGCCTATTAG
TTGTGACGACGCAATCAAACAGACACGTGCCTTTTCTCCATGATAGCACC
GCGGAACTGAAGTATCAATCACTGCATGTCGCGTACAAGTACACCTCGAG
TCTTGTCGTGCTGGCGTGCCAGCACCATAAGCTTTGTTGTGACTAGTTGA
GCCCCAACTCGTCTATTTATTTCTTGTCGCCTACAGTGGTGAGATAGACT
CTAAACTCGACTCGGCTTTGTCCCACTCCATTGCATACTGTCAGACGTGC
TTGCGAACTGGGAGAAGTACACGGTGAGGCAAGATGGGGATGCGATCCGG
AGACTGATCGGGACGATTGGGGTGTCGAGCCCGCTGTCTTCGATACGAAA
GGCGTTCACCAGCATAAGAGATGCCGAGGAAGAATCGGTGAGGATAGCTT
GATGGACAAGATAGGTATATAAACAGCATGAAATTGAGCGCATGCTGGAT
GGTGGACGTCGCCGGCAACCGGCGTTCGCAGGGCCTGTTGTTAAAGCTTT
CGTTAGGGGAGTGACACCACTCGAGTGAGAGAGACGTTTTTCTTTGTCTC
GCACACGCACACCCATTCTCCGTTTCATGCATGATTGTCGAGCCATACTG
CTGTGCCCGGTGCACAAGTCTAACTCCATACGAAGGGGGCGATATTATCA
CGTGCGTGTAAAGGCCAGACACCCAGAGAAGACGGTTAGATGCCACAATG
CACCCATAGGGCAATGTTCTCTGGAAATTGCCAAACCAGAACAACCGATC
AACTTTTAGGAGTCTGTTGTCGATATGCAAGGGAGCGTGCACTTGATGCG
AGACACCCTTATGACGATGCAGCTCGCCGATCAAGCGACTAGCTCAAAAC
CCCACGGTGCTTAGTGGTCGGTTCTTTGTGAGCTTGCCCGGGCGAAATAG
GTAGTGATGTGATGTCCAACGTGGTCGTGACTTTGGCTCCCTCGTCGCCC
TTCCCCAGTTCCCCACGAATGTAGCCGCGTGGGTTGATCTTCATGCTCAC
CTCCTTTTGACCACTTTTTGTTTGCTGTGCCAACACCCGACTTTCGCGTG
TCGAACTACAGCAGTATTTCCCCAACACCTGAATGTTTTCGCTCTCGCTC
TCCCGTTTTGCTTGGGTATGAACCTTGCTTTTTGTTGTGCACCACATGAG
CAGCAAGGGGATATCGACGTGATCGAGTATGTGGAGGCGTACATGGAGGT
GCTGACAGCTCTCGGGGATGCAGAGAACGACCTCTACTCCGCTAATTTCG
CCGACTACTCGGGCGGGGGAGGAACCAAGGTCAGTCGACTCAAAGAGACG
CTTGCACGCGGCTTGCGAATGGCCACTGACTGTAATTTCAACCTTATCCG
CTGGTTCCGCAAGTGGTGCGGATCTACTGTTGCCATGCCTTGCTTCTATG
ATACTATCGAGGAATATTCCCCGGTACATGTAATTTCGCTCCAGATGTCT
TGTATGAACAACATTTTTCCGTTTTCGGAACGTTGATCGACGTCTGCGGT
TCGTTGCCTTGTGCTTTGCTTTCATCACTTGCGGCGGGTTTTTTATCAGG
GGAGTCAATTCATCACCAAGGCGGAGAAGAGTCTCAAGATTGCGAAGGAA
GAGTTCAAGGTGGTCAACCAAATCCTCGGCATCTGACTGATCTTCAACAG
AAGTGGGAAATGTTTTGCGCCTCTAGTGCCTGGGCGTTTGACGTATAACG
GCGTCGCATGGCGAACATTCCTTTGTTGTCACAGCCGTGCGTTGTGATGC
GACAACTCCTAGGGTGGTGTTAATTCGGTTTACATTTGTCAAATGTTTTC
TCACCTTCAAATGCGTAAATTCATGCTGCTGACGCGTTTGCGGGCCAGGC
CGAAACCTGCTCGCGTCACACGCGCCAGCTTCGGGCCGTTTGTATGCTGT
GGCTCCGGCTGAACTCAAATTTGCGGTAGATTCTTTACGCCGGCCGCGCG
CGACGTGTGACGGTATCGTCCTCGGGATGACGTAGAGCGCCGGCGCGCGA
TGTTGTGTTGTTTGATCCCGCTTCGGTTTGGCACCAAGCGTGTGCGCTAG
CGGACTTGTGGAACTGTTGCTTTTTTTTAGTGCCATGCGGAAGGGTGTTG
CTGTACCCACCCTTTGAAACTATGACCTTGGTTTTTTTGAGTGATTTTGC
GTTATTCTTTGGGGCACCACACCGGGGGGAGGGGTTACGATGATCGAGTA
GGAGAGCTAATGTGGATGACCCGTGTCAGTGATCTCACCAAAGCTACTTG
AGGCGTCCGTTAAACAGTCTCCTCATTCGATGGGTGTTGCAGGGGCGAAA
GGATTTCCCACCCTCAACCTTGCACGAATCTAGTACACGCGCGCAGACCT
AGACGACCGATGTACCGGCCAAATCC
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Coding sequence (CDS) from alignment at C-linearis_contig102:231557..236332+

>mRNA_C-linearis_contig102.780.1 ID=mRNA_C-linearis_contig102.780.1|Name=mRNA_C-linearis_contig102.780.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at C-linearis_contig102:231557..236332+ (Chordaria linearis ClinC8C monoicous)
ATGCCTTTGGTTCACCGGAAACGTGTGGCTACTGCGCTTGCGTTCCTCGC
CTGCCTCGCGACCCGTCCCGTCGCTGATGGCTTCCTCCTCTCCCCTTCCT
TTTCGATAGCCCGAAAGATGCCTTTGGTTCACCGGAAACGTGTGGCTACT
GCGCTTGCGTTCCTCGCCTGCCTCGCGACCCGTCCCGTCGCTGATGGCTT
CCTCCTCTCCCCTTCCTTTTCGATAGCCCGAAAGCCTCGAGTTCCACATA
ACGGCAGCATTTCGAACTTCGCGATTTCTTACTTCCAGGGCGCATCCCAG
CACCAAAACGTAGTTCAAAAGGTTCAAAACGACGCCCAACGACCAGAGGA
GCTGCTGGGCGAGGTCGACACGCGACCCTCCGGGGAGAAGCTCGTAAACC
GACGAGCGTACTTCGAGCAGCTGCTTTATAAGACCGTGGCAACCGTGGCA
ATAAGCGGGGCATCGTCTCTGGTGGCGCCTCCGAGGCGCCTCCTTGCTGC
GGGGCTGGGGTACGAGGAGCCGGGGTCACGGTGGCTGCCCGAGCCTCGAG
TTCCACATAACGGCAGCATTTCGAACTTCGCGATTTCTTACTTCCAGGGC
GCATCCCAGCACCAAAACGTAGTTCAAAAGGTTCAAAACGACGCCCAACG
ACCAGAGGAGCTGCTGGGCGAGGTCGACACGCGACCCTCCGGGGAGAAGC
TCGTAAACCGACGAGCGTACTTCGAGCAGCTGCTTTATAAGACCGTGGCA
ACCGTGGCAATAAGCGGGGCATCGTCTCTGGTGGCGCCTCCGAGGCGCCT
CCTTGCTGCGGGGCTGGGGTACGAGGAGCCGGGGTCACGGTGGCTGCCCG
AGGGCAACCCGAAGGAGGCTTCTTCGTGGTTCCCCCTCTTGAAAAAGTGC
TACGAGTCTTTGGAAGGGCAACCCGAAGGAGGCTTCTTCGTGGTTCCCCC
TCTTGAAAAAGTGCTACGAGTCTTTGGAAGACGTGCTTGCGAACTGGGAG
AAGTACACGGTGAGGCAAGATGGGGATGCGATCCGGAGACTGATCGGGAC
GATTGGGGTGTCGAGCCCGCTGTCTTCGATACGAAAGGCGTTCACCAGCA
TAAGAGATGCCGAGGAAGAATCGACGTGCTTGCGAACTGGGAGAAGTACA
CGGTGAGGCAAGATGGGGATGCGATCCGGAGACTGATCGGGACGATTGGG
GTGTCGAGCCCGCTGTCTTCGATACGAAAGGCGTTCACCAGCATAAGAGA
TGCCGAGGAAGAATCGCAAGGGGATATCGACGTGATCGAGTATGTGGAGG
CGTACATGGAGGTGCTGACAGCTCTCGGGGATGCAGAGAACGACCTCTAC
TCCGCTAATTTCGCCGACTACTCGGGCGGGGGAGGAACCAAGCAAGGGGA
TATCGACGTGATCGAGTATGTGGAGGCGTACATGGAGGTGCTGACAGCTC
TCGGGGATGCAGAGAACGACCTCTACTCCGCTAATTTCGCCGACTACTCG
GGCGGGGGAGGAACCAAGGGGAGTCAATTCATCACCAAGGCGGAGAAGAG
TCTCAAGATTGCGAAGGAAGAGTTCAAGGTGGTCAACCAAATCCTCGGCA
TCTGAGGGAGTCAATTCATCACCAAGGCGGAGAAGAGTCTCAAGATTGCG
AAGGAAGAGTTCAAGGTGGTCAACCAAATCCTCGGCATCTGA
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