mRNA_C-linearis_contig102.776.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig102.776.1
Unique NamemRNA_C-linearis_contig102.776.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: D7FH30_ECTSI (Alcohol dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH30_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 3.700e-138
Identity = 250/401 (62.34%), Postives = 265/401 (66.08%), Query Frame = 2
Query:  233 TGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEG--------YESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFL-RTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNR------------------GQMKGASRGG-----------------GGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTEYS 1303
            TGGSKGIGRSCVESFA+RGARVLFTYCSDA AA  V  SFQP G VQGR LDQGDFD VRAFAAEVD WR GREI TVVNNAALGS+TV  Y GLPPP   SSS  A  +  GA G        YE+ARRRADEDMA+MRVN+LGPMWVTEALLPMM                                   A   +    G GR G A   P  L  T +KKTVLFVGSVGGGS +VFPGFR+ADAMSKAAVAY  KYFAA++R                  G    A+ G                   GGVDF+CLCPGATLTDMFR STLDKMEA GPGELERFL ALPQGRLMLPEEVGEAVYW CSSPAATMFHGAVIDASAGLAVRPG LTEY+
Sbjct:   59 TGGSKGIGRSCVESFARRGARVLFTYCSDAKAAETVAASFQPAGLVQGRWLDQGDFDSVRAFAAEVDRWRGGREISTVVNNAALGSSTVSNYCGLPPPVP-SSSRPAAADRDGASGRGLTADDDYEAARRRADEDMALMRVNALGPMWVTEALLPMMVPPPTPARGENEDPVAGAEVTETAA----------AIDGAATANGGGREG-ASAFPCALGSTKKKKTVLFVGSVGGGSHAVFPGFRSADAMSKAAVAYGAKYFAARSRQLRQQQEAGHDATARADDGSSATAAAGDVRAPAPAATAESDFDHPSGGVDFLCLCPGATLTDMFRASTLDKMEASGPGELERFLRALPQGRLMLPEEVGEAVYWFCSSPAATMFHGAVIDASAGLAVRPGTLTEYT 447          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A6H5K7X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X4_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 1.010e-125
Identity = 235/400 (58.75%), Postives = 252/400 (63.00%), Query Frame = 2
Query:  233 TGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARR--------RADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFL-RTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMK---------------GASRGG-------------------GGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTEYS 1303
            TGGSKGIGRSCVESFA+RGARVLFTYCSDA  A  V  SFQP G VQGRRLDQGDFD VRAFAAEVD WR GREI  VVNNAALGS+TV  Y GLPPP+  S                            RADEDMA+MRVN+LGPMWVTEALLPMM                                   A   +    G GR G A   P  L  T +KKTVLFVGSVGGGS +VFPGFR ADAMSKAAVAY  KY AA++R Q++               G+S G                     GGVDF+CLCPGATLTDM R STLD +EA+GPGELERFL ALPQGRLMLPEEVGEAVYW CSSPAATMFHGAVIDASAGLAVRPG LTEY+
Sbjct:  105 TGGSKGIGRSCVESFARRGARVLFTYCSDAKGAEAVAASFQPAGVVQGRRLDQGDFDSVRAFAAEVDRWRGGREISAVVNNAALGSSTVSNYCGLPPPAPVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADEDMALMRVNALGPMWVTEALLPMMVPRSRPAGENEDPLTGAE-----------------ATETAAAANGGGREG-ASAFPCALGSTKKKKTVLFVGSVGGGSHAVFPGFRYADAMSKAAVAYGAKYMAARSR-QLRQQQDAGRDATARADNGSSAGAXXXXXXXXXXXAESDFDHPSGGVDFLCLCPGATLTDMLRTSTLDAIEARGPGELERFLRALPQGRLMLPEEVGEAVYWFCSSPAATMFHGAVIDASAGLAVRPGALTEYT 485          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A7S0G6R5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6R5_9RHOD)

HSP 1 Score: 200 bits (508), Expect = 2.130e-56
Identity = 141/364 (38.74%), Postives = 184/364 (50.55%), Query Frame = 2
Query:  218 LLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREI---GTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVL-FVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297
            L VV+TGGS GIG++ VE FA+ G RVLFTY  +      +   F  V  V   RLDQGD + V  F AE  +W E  E+     +VNNAALGSATV +Y G                  GA  +E       +D A+MRVNSLGP+WV+  L+P                                                            LR  E++TV+ FVGSVGGGS +VFP + AAD MSKAAVAY  K+ AA N              VD  C+ PGAT T+MF++STL+++      + + F+  +P+G L+ P  V E +++L +SPA+ +FHGAVIDAS GLAVRPG+ TE
Sbjct:   34 LNVVITGGSSGIGKAIVEEFAREGHRVLFTYLRNIDGVAALRSKFAHVTAV---RLDQGDENSVSEFVAETKVWLEDSEVPHVDVIVNNAALGSATVDSYCGK-----------------GATEFE-------KDTALMRVNSLGPLWVSRGLIP------------------------------------------------------------LRKQEERTVVVFVGSVGGGSAAVFPEYHAADLMSKAAVAYLSKHLAADNVHS----------NVDIFCISPGATETEMFQKSTLNQLN-----DPDGFIAGMPKGVLISPTHVAENIFYLSTSPASKIFHGAVIDASMGLAVRPGLQTE 295          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: R7QEK9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEK9_CHOCR)

HSP 1 Score: 203 bits (517), Expect = 3.980e-56
Identity = 145/371 (39.08%), Postives = 193/371 (52.02%), Query Frame = 2
Query:  209 EAPLLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAY-----GGLPPPSQYSSSAAATGEWSGAEGYESAR---RRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297
            EAPL VVVTGGS GIG+S VE FA  G RVLFTY S    A  +E  ++ V +    +LDQG    V  FA  V  W +G  +  +VNNAALGSATV  Y     G               G    A+  ESA    RRA +D A+MRVN+LGP+WVT+AL+  +                                           +G GR                 +++F+GSVGGGS SVFP + AAD MSK+A++Y  K+ AAQ+              +D  C+ PGAT T+MFRRSTL K+      +++ F++++P+ RL+ PEE+ +AV+WL +     +FHGAV+DAS GLAVRPG+ TE
Sbjct:  134 EAPLNVVVTGGSTGIGKSIVECFAAAGHRVLFTYLSSVHGADALEAKYKAVTKA---KLDQGSVLSVANFAGVVAEWAKGEGVHVLVNNAALGSATVQKYVDGVGGHSVVDVVMKDMKLCNGGEKKADLPESALGMIRRAAQDEALMRVNALGPLWVTDALMDSIKMAASV-------------------------------------QGRGR----------------SSIVFIGSVGGGSASVFPEYCAADLMSKSALSYLSKHLAAQHVRDS----------IDVCCVAPGATETEMFRRSTLSKVS-----DVDAFVDSMPKRRLIQPEEIADAVFWLATQSPPGIFHGAVLDASMGLAVRPGLQTE 433          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A2V3IE52_9FLOR (Protein FixR n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE52_9FLOR)

HSP 1 Score: 176 bits (447), Expect = 5.150e-47
Identity = 132/375 (35.20%), Postives = 182/375 (48.53%), Query Frame = 2
Query:  203 PDEAPLL-VVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYG---------GLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297
            P   P+L VVVTGGS GIG + V  FA+ G RVLFTY +    A +++  +  V   Q   LDQ     V +F+  VD W     +  +VNNAALGSATV  Y          G     Q  SSA                 RA  D+A+MRVN+LGP+WVT+AL                                               + + R     G         + T++F+GSVGGGS +VFP + AAD MSKAA+ Y  K+ AAQ+              +D +C+ PGAT T+MFR+STL  +      ++  F++++P+ RL+ P E+ ++V+WL       +FHG+V+DAS GLAVRPG+ TE
Sbjct:   49 PPRRPVLSVVVTGGSTGIGEAIVTLFAEAGHRVLFTYLTRRGNAERLQSRYPHVTATQ---LDQAQVSSVASFSRTVDDWAGAAGVHILVNNAALGSATVRQYVHQKCQSPNFGKLATEQLPSSAV------------DMLMRAQNDLALMRVNALGPLWVTDAL----------------------------------------------SDSIRRAADVSG---------RATIVFIGSVGGGSAAVFPEYCAADLMSKAALTYFSKHLAAQHVRD----------NIDVMCISPGATETEMFRQSTLATIP-----DVPAFVDSMPKRRLIQPHEIAKSVFWLSVESPQGVFHGSVLDASMGLAVRPGLQTE 338          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A0G4J4J7_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J4J7_PLABS)

HSP 1 Score: 171 bits (433), Expect = 2.100e-45
Identity = 132/365 (36.16%), Postives = 173/365 (47.40%), Query Frame = 2
Query:  203 PDEAPLLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297
            P  A   VVVTGGS GIGRS VE+F     RVLFTY   A AA ++ + +     V   R DQGD   V A   +V  W +G+ +  +VNNAALGS TV  Y  L          A +    GA   +    +A  D A+MRVN+LGP+WV++AL+P+M                                                  + P          +  V+ VGSVGG S +VFP +  +D MSKAAVAY  ++ AA                VD VC+ PGAT TDM R S  +K  A     +      L +GRL+ P E+ + +YW+C+   A +FHGAV+DAS GLA RPG+ TE
Sbjct:    4 PPGAVKNVVVTGGSSGIGRSIVEAFCGESHRVLFTYLRHAEAAARLVERYPTATAV---RCDQGDLQSVVALHDDVARWLDGQPLDVLVNNAALGSQTVLTYENLRDNDAREHLDAGS---RGAH-IQQLLSKACRDEALMRVNALGPLWVSDALIPLM--------------------------------------------------SGP---------NRAVVVMVGSVGGSSGAVFPEYHPSDLMSKAAVAYLTQHLAADLIRSH----------VDVVCVSPGATDTDMMRASMTNKELA-----MPMTRGMLAKGRLIDPREIADVIYWICTQAQARVFHGAVLDASMGLACRPGLQTE 287          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A0H5REI3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5REI3_9EUKA)

HSP 1 Score: 169 bits (429), Expect = 6.230e-45
Identity = 118/360 (32.78%), Postives = 174/360 (48.33%), Query Frame = 2
Query:  218 LLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297
            L VV+TGGS GIGRS V+ FA+ G +VLFTY  + A A  +   +           DQG+ + +     +V  W  G  +  ++NNAALGS TV  Y  + P    S       +       +    RA +D A+MRVN+LGP+W+T +++P+M                                                               +   + +GSVGG S +VFP +  AD MSKAA+ Y  ++ AAQ+              +D +C+ PGAT+TDMFR+STLDK+ AK    ++ F++  P+ RL+ PEE+  A+ +L +  +  +FHG+VIDAS GL+ RPG+ TE
Sbjct:   16 LRVVITGGSSGIGRSVVQEFAEAGHQVLFTYLKNKAGADSLIAKYP--NNTHAVYCDQGNLECISNLYRQVKEWLNGSTLHALINNAALGSETVRTYDNVSPV--LSKPVRKDDDLD----IQDVLGRAWQDEALMRVNALGPLWITNSMIPLMVGP-----------------------------------------------------------SRCVCIMIGSVGGSSCAVFPEYCPADLMSKAALGYLTRHLAAQHIYDH----------IDVLCVSPGATITDMFRKSTLDKIGAK----VDDFIQKFPKRRLIEPEEIAAALLFLTTQSSCRIFHGSVIDASMGLSTRPGIQTE 294          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A2P6N3E0_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N3E0_9EUKA)

HSP 1 Score: 164 bits (416), Expect = 3.030e-42
Identity = 129/364 (35.44%), Postives = 182/364 (50.00%), Query Frame = 2
Query:  218 LLVVVTGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFA----AEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTE 1297
            L V++ GGS GIG S V+ FA+ G RVL TY S+   A  V +++     V    LDQGD + +  FA     +VD+         +VNNAALGSATV  Y  +    Q S     T          + RR+A ED A+M+VNSLGP+W+T+ + P++                                            G     T P  P+        T++++GSVGG S  VFP +RA+D MSKAAV Y  K+ AA+   Q++         VD  CL PGAT+T+MFR+STL+        + + F   +P+ RL+  +E+ +A + L + P A +FHGAV+DAS GL +RPG+ TE
Sbjct:   89 LNVIIIGGSSGIGVSIVKRFAEAGHRVLSTYYSNMTGALDVHKAYPHAEYVF---LDQGDLESIETFAHGGMQKVDV---------LVNNAALGSATVINY--VNDKLQKSGGDIKT--------ISTLRRKALEDEALMKVNSLGPLWITDVITPLL-------------------------------------------RGPATSETTPTQPVR----NYSTIIYMGSVGG-STGVFPEYRASDLMSKAAVTYLSKHIAAE---QVRSH-------VDVFCLAPGATMTEMFRKSTLETCS-----DPKLFTSMMPKQRLIETKELADATFVLSTEPWARIFHGAVLDASLGLGIRPGLQTE 367          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: UPI00055A680A (SDR family oxidoreductase n=1 Tax=Kitasatospora azatica TaxID=58347 RepID=UPI00055A680A)

HSP 1 Score: 157 bits (396), Expect = 1.380e-40
Identity = 123/361 (34.07%), Postives = 167/361 (46.26%), Query Frame = 2
Query:  224 VVVTGGSKGIGRSCVESFAKRGARVLFTYC--SDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLTEY 1300
            +++TGGS GIGR+CVE FA+ G  V FTY   ++ AAA   E + +  G  +    DQG++       AE+        +  +VNNAA+GSATV  Y G   P Q                          D AM+R+N+LGP+W++ ALLP +                                         + +G G+                  ++ V SVGGG  S FPGFR AD MSKAA+ +  +  AA+   Q           V    +CPGA  T MF  STLD +  +   EL   L+ LPQGRL+ P EV E ++WL + PA+ + HGAVIDAS GL V PG+LT +
Sbjct:    6 ILITGGSAGIGRACVERFARAGDNVWFTYRLGAERAAAIVAEVNQERPGAARAFAFDQGNWPDQERLLAELP-----GPVHVLVNNAAVGSATVARYAGPHEPEQ--------------------------DEAMLRINALGPLWLSRALLPQL-----------------------------------------IRQGGGK------------------IINVSSVGGGV-SQFPGFRLADGMSKAALCHLTRQLAAELVHQS----------VHVFAICPGAVDTGMFEASTLDPLTPENRAEL---LKRLPQGRLIEPAEVAELIWWL-AGPASGLLHGAVIDASMGLGVHPGLLTGH 261          
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Match: A0A540W882_9ACTN (SDR family oxidoreductase n=2 Tax=Kitasatospora TaxID=2063 RepID=A0A540W882_9ACTN)

HSP 1 Score: 152 bits (385), Expect = 5.180e-39
Identity = 120/359 (33.43%), Postives = 168/359 (46.80%), Query Frame = 2
Query:  224 VVVTGGSKGIGRSCVESFAKRGARVLFTYC--SDAAAAYQVEQSFQPVGRVQGRRLDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQYSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPAAGNSPVDEGLGRGGTAPGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKYFAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGELERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRPGVLT 1294
            V++TGGS GIGR+CVE FA+ G  V FTY   +D A     + + +  G V+    DQGD+   +    E+        +  +VNNAA+GSATV  Y G   PSQ+                       + D AM+R+N+LGP+W+T  LLP +                                         +++G G+                  ++ V SVGGG  S FPGFR AD MSKAA+ +  +  AA+   +           V+   +CPGA  T MF  STL+ ++   P E    +  LP+GRL+ P EV E ++WL + P +T+ HGAVIDAS GL V PG+LT
Sbjct:    6 VLITGGSAGIGRACVERFAQAGDNVWFTYRLGADRATVLAEKLNAEGPGTVRAFAFDQGDWADHQRLLDELP-----GPVCVLVNNAAVGSATVARYAG---PSQH-----------------------ERDEAMLRINALGPLWLTRKLLPQL-----------------------------------------IEQGCGK------------------IVNVSSVGGGV-SQFPGFRLADGMSKAALGHFTRQLAAELAHEP----------VEVFAICPGAVETGMFEASTLNALD---PVEQAELVHRLPRGRLIDPAEVAELIFWL-AGPDSTLLHGAVIDASMGLGVHPGLLT 259          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH30_ECTSI3.700e-13862.34Alcohol dehydrogenase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5K7X4_9PHAE1.010e-12558.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0G6R5_9RHOD2.130e-5638.74Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R7QEK9_CHOCR3.980e-5639.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IE52_9FLOR5.150e-4735.20Protein FixR n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A0G4J4J7_PLABS2.100e-4536.16Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A0H5REI3_9EUKA6.230e-4532.78Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A2P6N3E0_9EUKA3.030e-4235.44Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
UPI00055A680A1.380e-4034.07SDR family oxidoreductase n=1 Tax=Kitasatospora az... [more]
A0A540W882_9ACTN5.180e-3933.43SDR family oxidoreductase n=2 Tax=Kitasatospora Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:206350..207949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score157.9
Seed ortholog evalue1e-35
Seed eggNOG ortholog1449346.JQMO01000003_gene5402
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Enoyl-(Acyl carrier protein) reductase
EggNOG OGs2IC68@201174,COG1028@1,COG1028@2
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-26_003290.1
COG Functional cat.IQ
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size1600
Cds size1227
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.776.1prot_C-linearis_contig102.776.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig102 206432..207658 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927368.6858552-UTR-C-linearis_contig102:206349..2064311622927368.6858552-UTR-C-linearis_contig102:206349..206431Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 206350..206431 +
1690879657.9929392-UTR-C-linearis_contig102:206349..2064311690879657.9929392-UTR-C-linearis_contig102:206349..206431Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 206350..206431 +
1622927368.7138317-UTR-C-linearis_contig102:207658..2079491622927368.7138317-UTR-C-linearis_contig102:207658..207949Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 207659..207949 +
1690879658.0167816-UTR-C-linearis_contig102:207658..2079491690879658.0167816-UTR-C-linearis_contig102:207658..207949Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 207659..207949 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927368.7000384-CDS-C-linearis_contig102:206431..2076581622927368.7000384-CDS-C-linearis_contig102:206431..207658Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 206432..207658 +
1690879658.0045342-CDS-C-linearis_contig102:206431..2076581690879658.0045342-CDS-C-linearis_contig102:206431..207658Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 206432..207658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig102.776.1

>prot_C-linearis_contig102.776.1 ID=prot_C-linearis_contig102.776.1|Name=mRNA_C-linearis_contig102.776.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=409bp
MEPSRAEGDHEHPSNKPSPHPAPADPATVKASSSATAGNSPDEAPLLVVV
TGGSKGIGRSCVESFAKRGARVLFTYCSDAAAAYQVEQSFQPVGRVQGRR
LDQGDFDGVRAFAAEVDLWREGREIGTVVNNAALGSATVGAYGGLPPPSQ
YSSSAAATGEWSGAEGYESARRRADEDMAMMRVNSLGPMWVTEALLPMMM
MPPKVGGASDETARVETSAEAAAAAAASESEEQPAAGNSPVDEGLGRGGT
APGLPMFLRTDEKKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYACKY
FAAQNRGQMKGASRGGGGGVDFVCLCPGATLTDMFRRSTLDKMEAKGPGE
LERFLEALPQGRLMLPEEVGEAVYWLCSSPAATMFHGAVIDASAGLAVRP
GVLTEYSI*
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mRNA from alignment at C-linearis_contig102:206350..207949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.776.1 ID=mRNA_C-linearis_contig102.776.1|Name=mRNA_C-linearis_contig102.776.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1600bp|location=Sequence derived from alignment at C-linearis_contig102:206350..207949+ (Chordaria linearis ClinC8C monoicous)
GTGTGTCTCTTCTCCGCCAGCACGCCCCAGCCGACTAGGAAGGGAGACGT TGTATGCCGCTGGTGGCAGCGCACACAAGTAAATGGAACCAAGCAGAGCG GAAGGAGATCATGAACACCCGTCCAACAAACCGTCGCCCCACCCCGCACC GGCCGATCCCGCAACGGTAAAGGCATCCTCCTCAGCCACAGCAGGAAACT CGCCAGACGAAGCGCCGCTCCTGGTCGTGGTGACTGGAGGATCCAAGGGC ATCGGCAGGTCTTGCGTTGAATCGTTCGCGAAACGCGGTGCACGCGTGCT CTTCACCTATTGCTCCGACGCGGCCGCGGCCTACCAGGTGGAACAGTCGT TCCAGCCCGTGGGACGGGTGCAAGGCCGTCGGCTCGACCAGGGAGACTTC GACGGCGTCCGAGCTTTCGCCGCAGAGGTGGACCTGTGGCGGGAGGGCCG GGAGATCGGCACCGTCGTCAACAACGCCGCGCTCGGATCCGCCACTGTGG GTGCTTACGGCGGTCTCCCTCCCCCGTCTCAGTACAGCAGTAGTGCCGCG GCGACTGGAGAGTGGTCCGGGGCTGAAGGCTACGAATCGGCCCGCAGACG AGCAGACGAGGACATGGCGATGATGCGGGTAAACTCCCTGGGTCCCATGT GGGTCACGGAAGCTCTCTTGCCGATGATGATGATGCCGCCGAAGGTTGGT GGCGCCTCGGACGAAACGGCGCGGGTAGAAACCTCGGCGGAGGCCGCCGC CGCAGCAGCAGCATCAGAAAGCGAGGAACAACCAGCGGCGGGGAACAGCC CCGTCGACGAAGGACTAGGACGGGGAGGAACCGCCCCAGGGCTTCCGATG TTTCTTAGGACGGACGAGAAGAAGACGGTTCTGTTTGTCGGCTCGGTGGG CGGTGGCTCCCAGTCCGTCTTCCCGGGATTTCGCGCGGCCGACGCCATGA GCAAGGCAGCCGTCGCCTACGCGTGCAAGTACTTCGCGGCGCAAAACCGT GGCCAGATGAAGGGCGCGAGCCGCGGCGGCGGCGGCGGCGTCGACTTCGT GTGCCTGTGCCCGGGGGCAACTCTGACCGACATGTTCCGCAGGAGCACGC TGGACAAGATGGAGGCAAAGGGCCCCGGGGAGCTCGAGCGCTTCCTGGAG GCACTGCCGCAGGGTCGACTCATGCTGCCCGAAGAGGTCGGGGAGGCGGT GTACTGGCTCTGCTCGTCCCCAGCGGCGACCATGTTTCACGGCGCGGTGA TCGACGCGTCGGCCGGCCTAGCCGTTCGACCGGGGGTCCTCACGGAGTAT TCGATTTGAACGATACGCTGTCTGCTATATAGGGCCCCACAAATTGTGTA AGGTCGAGAAATGAAAATAGGCCCCGAACGCGAGTCTAGTCCGGTATTTT GGATCACGTGGTTCTTGTGCCGGCATTTGTCCTCAACATGCCGAGTAGGT CAATTTGGTGTGTGTCATCTGGCAGTTCTTGTTACTTGGAGGATACTTCC TCTGTCCCATAAGTCTGGGCTGTTATGAATGCGCAGTCGTTAGGGTACTT ACACGTTGCCGTTTAGCCTTTGGCCGGGTGCGTTAGAAAGGAAAAACACA
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Coding sequence (CDS) from alignment at C-linearis_contig102:206350..207949+

>mRNA_C-linearis_contig102.776.1 ID=mRNA_C-linearis_contig102.776.1|Name=mRNA_C-linearis_contig102.776.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2454bp|location=Sequence derived from alignment at C-linearis_contig102:206350..207949+ (Chordaria linearis ClinC8C monoicous)
ATGGAACCAAGCAGAGCGGAAGGAGATCATGAACACCCGTCCAACAAACC
GTCGCCCCACCCCGCACCGGCCGATCCCGCAACGGTAAAGGCATCCTCCT
CAGCCACAGCAGGAAACTCGCCAGACGAAGCGCCGCTCCTGGTCGTGGTG
ACTGGAGGATCCAAGGGCATCGGCAGGTCTTGCGTTGAATCGTTCGCGAA
ACGCGGTGCACGCGTGCTCTTCACCTATTGCTCCGACGCGGCCGCGGCCT
ACCAGGTGGAACAGTCGTTCCAGCCCGTGGGACGGGTGCAAGGCCGTCGG
CTCGACCAGGGAGACTTCGACGGCGTCCGAGCTTTCGCCGCAGAGGTGGA
CCTGTGGCGGGAGGGCCGGGAGATCGGCACCGTCGTCAACAACGCCGCGC
TCGGATCCGCCACTGTGGGTGCTTACGGCGGTCTCCCTCCCCCGTCTCAG
TACAGCAGTAGTGCCGCGGCGACTGGAGAGTGGTCCGGGGCTGAAGGCTA
CGAATCGGCCCGCAGACGAGCAGACGAGGACATGGCGATGATGCGGGTAA
ACTCCCTGGGTCCCATGTGGGTCACGGAAGCTCTCTTGCCGATGATGATG
ATGCCGCCGAAGGTTGGTGGCGCCTCGGACGAAACGGCGCGGGTAGAAAC
CTCGGCGGAGGCCGCCGCCGCAGCAGCAGCATCAGAAAGCGAGGAACAAC
CAGCGGCGGGGAACAGCCCCGTCGACGAAGGACTAGGACGGGGAGGAACC
GCCCCAGGGCTTCCGATGTTTCTTAGGACGGACGAGAAGAAGACGGTTCT
GTTTGTCGGCTCGGTGGGCGGTGGCTCCCAGTCCGTCTTCCCGGGATTTC
GCGCGGCCGACGCCATGAGCAAGGCAGCCGTCGCCTACGCGTGCAAGTAC
TTCGCGGCGCAAAACCGTGGCCAGATGAAGGGCGCGAGCCGCGGCGGCGG
CGGCGGCGTCGACTTCGTGTGCCTGTGCCCGGGGGCAACTCTGACCGACA
TGTTCCGCAGGAGCACGCTGGACAAGATGGAGGCAAAGGGCCCCGGGGAG
CTCGAGCGCTTCCTGGAGGCACTGCCGCAGGGTCGACTCATGCTGCCCGA
AGAGGTCGGGGAGGCGGTGTACTGGCTCTGCTCGTCCCCAGCGGCGACCA
TGTTTCACGGCGCGGTGATCGACGCGTCGGCCGGCCTAGCCGTTCGACCG
GGGGTCCTCACGGAGTATTCGATTTGAATGGAACCAAGCAGAGCGGAAGG
AGATCATGAACACCCGTCCAACAAACCGTCGCCCCACCCCGCACCGGCCG
ATCCCGCAACGGTAAAGGCATCCTCCTCAGCCACAGCAGGAAACTCGCCA
GACGAAGCGCCGCTCCTGGTCGTGGTGACTGGAGGATCCAAGGGCATCGG
CAGGTCTTGCGTTGAATCGTTCGCGAAACGCGGTGCACGCGTGCTCTTCA
CCTATTGCTCCGACGCGGCCGCGGCCTACCAGGTGGAACAGTCGTTCCAG
CCCGTGGGACGGGTGCAAGGCCGTCGGCTCGACCAGGGAGACTTCGACGG
CGTCCGAGCTTTCGCCGCAGAGGTGGACCTGTGGCGGGAGGGCCGGGAGA
TCGGCACCGTCGTCAACAACGCCGCGCTCGGATCCGCCACTGTGGGTGCT
TACGGCGGTCTCCCTCCCCCGTCTCAGTACAGCAGTAGTGCCGCGGCGAC
TGGAGAGTGGTCCGGGGCTGAAGGCTACGAATCGGCCCGCAGACGAGCAG
ACGAGGACATGGCGATGATGCGGGTAAACTCCCTGGGTCCCATGTGGGTC
ACGGAAGCTCTCTTGCCGATGATGATGATGCCGCCGAAGGTTGGTGGCGC
CTCGGACGAAACGGCGCGGGTAGAAACCTCGGCGGAGGCCGCCGCCGCAG
CAGCAGCATCAGAAAGCGAGGAACAACCAGCGGCGGGGAACAGCCCCGTC
GACGAAGGACTAGGACGGGGAGGAACCGCCCCAGGGCTTCCGATGTTTCT
TAGGACGGACGAGAAGAAGACGGTTCTGTTTGTCGGCTCGGTGGGCGGTG
GCTCCCAGTCCGTCTTCCCGGGATTTCGCGCGGCCGACGCCATGAGCAAG
GCAGCCGTCGCCTACGCGTGCAAGTACTTCGCGGCGCAAAACCGTGGCCA
GATGAAGGGCGCGAGCCGCGGCGGCGGCGGCGGCGTCGACTTCGTGTGCC
TGTGCCCGGGGGCAACTCTGACCGACATGTTCCGCAGGAGCACGCTGGAC
AAGATGGAGGCAAAGGGCCCCGGGGAGCTCGAGCGCTTCCTGGAGGCACT
GCCGCAGGGTCGACTCATGCTGCCCGAAGAGGTCGGGGAGGCGGTGTACT
GGCTCTGCTCGTCCCCAGCGGCGACCATGTTTCACGGCGCGGTGATCGAC
GCGTCGGCCGGCCTAGCCGTTCGACCGGGGGTCCTCACGGAGTATTCGAT
TTGA
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