prot_C-linearis_contig102.770.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.770.1
Unique Nameprot_C-linearis_contig102.770.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length422
Homology
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: D7G1C0_ECTSI (Lissencephaly-1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C0_ECTSI)

HSP 1 Score: 571 bits (1472), Expect = 1.070e-200
Identity = 381/423 (90.07%), Postives = 396/423 (93.62%), Query Frame = 0
Query:    1 MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLKSGMRPGREKGGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPPAGDXXXXXXXXXXXXXXXAATGYCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFAPQSAERTLSTV----GSADGEGAGRGRFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWE 419
            MVLTQKQR+DMHVGMLEYM GQG +FA+AAAAFA A GLED+TGNE FRGLLEKKWTSVVRLQRKVMDLEARLDQAQ+DLKSG+RPGREKG A GS+R+LPRAPAK VL GHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGA+CLKTLRGHDHNVSCVAWVPPAGD XXXXXXXXXXXXX AATG+CTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VVES+AFAP+SAER L+T     G   GEGA R RF+ASGSRDKTVKLWNASVG CLM+FSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGR ARKLEDAHGH VTALAMHKTSPIVVSGGVD ELHVWE
Sbjct:    1 MVLTQKQRHDMHVGMLEYMKGQGEDFADAAAAFAVATGLEDATGNESFRGLLEKKWTSVVRLQRKVMDLEARLDQAQQDLKSGVRPGREKG-AGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIAFAPESAERALATAVGSEGGGGGEGAVRRRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRCARKLEDAHGHLVTALAMHKTSPIVVSGGVDGELHVWE 422          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: A0A6H5JKZ3_9PHAE (Ge1_WD40 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ3_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 2.620e-126
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0
Query:   67 MDLEARLDQAQEDLKSGMRPGREKGGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPPAGDXXXXXXXXXXXXXXXAATGYCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFAPQSAERTLSTVGSADGEGAGRGRFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK 378
            M+LEARLDQAQ+DLKSG+RPGREKG A GS+R+LPRAPAK VL GHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGA+CLKTLRGHDHNVSCVAWVPPAGD XXXXXXXXXXXXX AATG+CTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ESVAFAP+SAERTL+T           GRF+ASGSRDKTVKLWNASVG CLM+FSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK
Sbjct:    1 MELEARLDQAQDDLKSGVRPGREKG-AGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGAECLKTLRGHDHNVSCVAWVPPAGDTXXXXXXXXXXXXXEAATGFCTRTLKGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVAFAPESAERTLATA---------VGRFVASGSRDKTVKLWNASVGHCLMTFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVK 302          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: A0A5D6Y4C8_9STRA (Lissencephaly-1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4C8_9STRA)

HSP 1 Score: 320 bits (819), Expect = 4.830e-102
Identity = 227/458 (49.56%), Postives = 287/458 (62.66%), Query Frame = 0
Query:    1 MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLK---SGMRPGREK-GGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPPAG--DXXXXXXXXXXXXXXXAATGYCTRTLKGD-SEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFAPQSAE---------RTLSTVGSADGEG---AGRG-------------------RFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 420
            MVLT+KQR D+H  +L+Y+ G G  FA++AAAF   AG+  S   +   GLLEKKWTSV+RLQRKVM+LE++L Q +E  +    G+   RE+ GGA      LPRAP +  L+GHR+PVT VA HP++SV AS SEDATVKVWD+E+GE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS  G    +CLKTLRGHDHNV  V + PPA   D                ATGYC  TL G  S+WVR VA+SDDG                              HVVESVAFA   A+         + L+ VG+  G G   AG G                   +F+ SGSRD+TV+LW A  G  LM+F+ HENWVRCV  HP G +V+S ++DR++R +D++TGR  R L++AH HF+T+  +H + P++V+GG+D+ ++VWEC
Sbjct:    1 MVLTEKQRQDLHQSVLDYLSGMGERFADSAAAFERDAGISKSADGK-HAGLLEKKWTSVIRLQRKVMELESKLQQLEESARLGGGGIVSRREQLGGARPRSEFLPRAPPQFALSGHRSPVTSVAFHPVFSVFASGSEDATVKVWDFESGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDGD--YECLKTLRGHDHNVCGVVFAPPAAGEDLLYSCSRDNTVKVWELATGYCVNTLNGGHSDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQAIREHEHVVESVAFARSGAQEQAVERAHAKKLAAVGAVLGNGDAAAGGGTGPHVAADVGDVGAGSRRVKFLVSGSRDRTVRLWEAFSGALLMNFASHENWVRCVRFHPCGKYVISVAEDRTLRVYDIETGRCVRTLDEAHAHFLTSADVHPSLPLIVTGGIDKVINVWEC 455          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: A0A2D4CDK0_PYTIN (Lissencephaly-1 homolog n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDK0_PYTIN)

HSP 1 Score: 306 bits (785), Expect = 4.700e-97
Identity = 214/449 (47.66%), Postives = 273/449 (60.80%), Query Frame = 0
Query:    1 MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLKSGMRPGREK--GGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVP-PAGDXXXXXXXXXXXXXXXAATGYCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFAPQSAE---------RTLSTVGSADGEGAGRG----------------RFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 420
            MVLT+KQR D+H  ML+Y++  G  FA+ AAAF   AG+  S   +    +LEKKWTSV+RLQ+KVM+LE+++ Q +E  K G    R    GG       LPRAP K  L+GHRNP+TCVA HP++SV  S SEDAT+KVWD+ETGE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS  G    +CLKTLRGHDHNV  +A+ P P  D                +TGYC  T+  G ++WVR + +SDDG                              HVVESV FA   A+         + L TV S   E A  G                +F+ SGSRD+TV+LW A     LMSFS HENWVRCV  HP G + +S ++DR++R  D++TGR  R ++ AH HF+T+L +H + P++++GG+D+ ++VWEC
Sbjct:    1 MVLTEKQRQDLHQSMLDYLVAMGDRFADTAAAFEREAGITQSHDGK-HADMLEKKWTSVLRLQKKVMELESKIKQLEESSKLGGIVSRRDVLGGGRSRAEFLPRAPCKYSLSGHRNPITCVAFHPVFSVFVSGSEDATIKVWDFETGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGD--YECLKTLRGHDHNVCGLAFSPLPDSDRLYSCSRDHTIKVWEISTGYCLHTMNNGHADWVRDICVSDDGLYLASCGNDRSILFWDLQHHRVLQSLREHEHVVESVVFAKSGAQEQAIEKFHAQKLVTVSSPSSETALNGSGSTTDAAHVASPRKIKFLLSGSRDRTVRLWEAFSATMLMSFSSHENWVRCVRFHPCGRYAVSVAEDRTIRVHDIETGRCVRTVDQAHEHFLTSLDIHASLPLMITGGIDKHINVWEC 446          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: K3WAC5_GLOUD (Lissencephaly-1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAC5_GLOUD)

HSP 1 Score: 302 bits (774), Expect = 3.580e-95
Identity = 219/467 (46.90%), Postives = 272/467 (58.24%), Query Frame = 0
Query:    1 MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLKSG----MRPGREKGGAAGSER--ILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPPAG--DXXXXXXXXXXXXXXXAATGYCTRTLKGD-SEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFAPQSAERTL-------------STVGSADGEGAGRG-------------------------RFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 420
            MVLT+KQR D+H  ML+Y+ G G  FA+ AAAF   AG+  S   +   GLLEKKWTSV+RLQRKVM+LE ++   +E  K G     R     GG  G  R   LPRAP K  L GHR+PVTCVA HP++SV AS SEDATVKVWD+ETGE ERTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G    +CLKTLRGHDHNV  V + P     D                +TGYC  TL G  S+WVR VA+SDDG                              HVVESV FA   A+                + V   +GE   R                          +F+ SGSRD+TV+LW A  G  LM+F+ HENWVRCV  HP G + +SA++D+++R +D++TGR  R L++AH HF+T++ +H T P+++SG +D+ ++VWEC
Sbjct:    1 MVLTEKQRQDLHQSMLDYLHGMGERFADTAAAFEREAGITKSADGK-HAGLLEKKWTSVIRLQRKVMELENKVQLLEETAKLGNGVVSRRDLLGGGIGGRPRSEFLPRAPPKYALTGHRSPVTCVAFHPVFSVFASGSEDATVKVWDFETGEYERTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGD--YECLKTLRGHDHNVCGVVFAPATAGEDLLYSCSRDHTIKVWEISTGYCVNTLNGGHSDWVRDVAVSDDGLYLATCGNDRSILLWDLQHMRVLQSIREHEHVVESVTFAKSGAQELAIEKAHAKKLVAAGAVVAIGNGEAVARSPEDALTTDMVVDVTNASTSSSVRRVKFLLSGSRDRTVRLWEAFSGTLLMNFASHENWVRCVRFHPCGKYAISAAEDKTIRVYDLETGRCVRTLDEAHSHFLTSVDVHPTLPLMISGSIDKLINVWEC 464          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: A0A484E3V1_BRELC (Lissencephaly-1 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3V1_BRELC)

HSP 1 Score: 301 bits (770), Expect = 1.160e-94
Identity = 218/460 (47.39%), Postives = 276/460 (60.00%), Query Frame = 0
Query:    1 MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLK-SGMRPGREKGGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPP-AGDXXXXXXXXXXXXXXXAATGYCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFAPQSAERTLSTV---------------------------GSADGEGAG----------RGRFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 420
            MVLT KQR+D+H  ML+Y++G G  FA AAAAF   A +  S+  +   GLLEKKWTSV+RLQRKVM+LE +L Q +E+ K  G+   R+  GA      LPRAPAK  L GHR+P+TCV  HP++SV+ S SEDA+VKVWD+ETGE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS  G    +CL+TLRGHDHNV  + + P  A D                +TGYC  TL  G ++WVR VA+S DG                              HVVESV FA    E+ +  +                            S  GE +G          R + + SGSRD+TV+LW A  G  L+ F+ HENWVR V  HPSG + LSA +D+++R FD+++GR  R L++AH HFVT L +H + P++VSGG+D+ ++VWEC
Sbjct:    1 MVLTDKQRHDLHQAMLDYLVGMGERFAAAAAAFENEADISKSSDGK-HAGLLEKKWTSVIRLQRKVMELETKLAQFEENAKVGGVLSRRDMLGARQRTEFLPRAPAKLSLTGHRSPITCVLFHPVFSVLVSGSEDASVKVWDFETGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGD--YECLRTLRGHDHNVCGIVFGPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNTGHTDWVRDVAVSHDGLYLASCGNDRSILFWDLPHMRILQSIREHEHVVESVVFAKAGQEQVIEKIYAKKLAATGHFSPANGSSFAEVNNRVTDSTAGEPSGVAVVSKPTIRRMKILLSGSRDRTVRLWEAFTGTQLIVFASHENWVREVRFHPSGKYALSAGEDKTIRVFDIESGRCVRTLDEAHSHFVTCLDVHPSLPLIVSGGIDKIINVWEC 457          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: A0A8K1CCN7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCN7_PYTOL)

HSP 1 Score: 298 bits (763), Expect = 5.160e-94
Identity = 227/429 (52.91%), Postives = 282/429 (65.73%), Query Frame = 0
Query:   15 MLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLKSGMRPGREK--GGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPPA-GDXXXXXXXXXXXXXXXAATGYCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFA---PQS-------AERTLSTVGS----ADGE-----GAGRGRFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 420
            ML+YM+  G  FAE AAAF   AG+  S   +   GLLEKKWTSV+RLQRKVM+LE ++ Q +E  K G    R    GG       LPR P K  L GHRNP+TCVA HP++SV+ SSSEDAT+KVWD+ETGE ERT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS  G    +CLKTLRGHDHNV  + + P A  DXXXXXXXXXXXXXXX +TGYC  T+  G ++WVR + +SDDG                              HVVESV FA   PQ        A +  S VG+    A+G      G  + +FI SGSRD+TV+LW A  G  LM+F+ HENWVRCV  HP G +V+S ++D+++R FD++TGR  R +++AHGHF+T+L +H T P++V+G +D+ ++VWEC
Sbjct:    1 MLDYMIAMGDRFAETAAAFEREAGVTRSPDAKQ-AGLLEKKWTSVIRLQRKVMELEGKVKQLEESSKLGGIVSRRDVVGGGRSKAEFLPRGPPKYSLTGHRNPITCVAFHPVFSVIVSSSEDATIKVWDFETGEFERTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGE--YECLKTLRGHDHNVCGLVFAPSAESDXXXXXXXXXXXXXXXISTGYCLHTMSNGHADWVRNITVSDDGLYLASCGNDRAILFWDLQHHRVLQALREHDHVVESVVFAKSGPQEQAIEKFLAPKLASVVGAPLDAANGSAELSAGPRKVKFILSGSRDRTVRLWEAFSGTMLMNFASHENWVRCVRFHPCGKYVVSVAEDKTIRVFDIETGRCVRTVDEAHGHFLTSLDVHPTLPLMVTGSIDKLINVWEC 426          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: F0WCC4_9STRA (Lissencephaly-1 homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCC4_9STRA)

HSP 1 Score: 295 bits (754), Expect = 2.500e-92
Identity = 218/455 (47.91%), Postives = 282/455 (61.98%), Query Frame = 0
Query:    1 MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLKSGMRPGREKGGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPPAGDXXXXXXXXXXXXXXXAATGYCTRTL-KGDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFAPQSAE---------RTLSTVGSAD-------------------------GEGAGRGRFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 420
            MVLT KQ+ D+H  +L+Y+ G G  F E +AAF   A +  S   +   GLLEKKWTSV+RLQ+KVM+LEA++ Q +E  K G    R           LPRAP K  L+GHR+P+TCV  HP++SV+ S SEDAT+KVWD+E GE ERTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  G  G  +C++TLRGHDHNVSCV +     +                +TGYCT+TL  G ++W+R +AL+DD      XXXXXXXXXXX              HV+E + F+  + E         R ++  G A+                         G+   + R++ SGSRD+TV+LW A  G  LM+F+ HENWVR V  HPSG +V+SA++D+SVR FD++TGR  R L DAH HFVT L +H T P+++SGG+D+ ++VWEC
Sbjct:    1 MVLTDKQQQDLHQSILDYLNGMGERFTETSAAFEREANIHRSADGK-HAGLLEKKWTSVLRLQKKVMELEAKVHQMEEAAKLGNVISRRDVVGPHRSACLPRAPRKFELSGHRSPITCVIFHPVFSVLVSGSEDATLKVWDFEMGEYERTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GVEGNYECIRTLRGHDHNVSCVIFDTIQNERIITCSRDQQIKLWDISTGYCTKTLVNGHTDWIRDIALTDDSQLLASXXXXXXXXXXXMQTFRPIQTIREHEHVIECITFSKTAVEHRGTEKAVSRKVAPAGLANSPAAMMILANSENRDTAENGVHLDHGKAPKKLRYLLSGSRDRTVRLWEALSGVLLMNFTQHENWVRMVRFHPSGKYVISAAEDKSVRVFDIETGRCVRTLLDAHTHFVTCLDIHPTLPLLISGGIDKVINVWEC 452          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: H3H2U3_PHYRM (Lissencephaly-1 homolog n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3H2U3_PHYRM)

HSP 1 Score: 286 bits (732), Expect = 6.200e-89
Identity = 219/463 (47.30%), Postives = 268/463 (57.88%), Query Frame = 0
Query:    1 MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLK-SGMRPGREKGGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPP-AGDXXXXXXXXXXXXXXXAATGYCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFA-------------------------------PQSA--ERTLSTVGSADGEGAG-------RGRFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 420
            MVLT KQR D+H  M++Y++G G  FA++AAA    AG+  S+  +   GLLEKKWTSV+RLQRKVM+LE +L Q +E+ K  G+   R+  GA      LPRAPAK  L GHR+P+TCVA HP++SV+ S+SEDA VKVWD+ETGE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS  G    +CL+TLRGHDHNV  + + P  A D                +TGYC  TL  G S+WVR VA+SDDG                              HVVESV FA                               P+S   + T ST G   G  A        R +F+ SGSRD+TV+LW A  G  LM F+ HENWVR V  HPSG + LSA +D+++R FD++TGR  R L+DAH HFVT L +               ++VWEC
Sbjct:    1 MVLTDKQRQDLHQAMIDYLVGMGERFADSAAALEKEAGVTKSSDGK-HAGLLEKKWTSVIRLQRKVMELETKLAQLEENTKLGGVLSRRDVLGARQRSEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSASEDAAVKVWDFETGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGD--YECLRTLRGHDHNVCGIVFGPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHSDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGIQEQVIERAHAKKLATTGALTPSNGSSLPESNNHDMTSSTAGEPTGAVAATTVPTVRRMKFLLSGSRDRTVRLWEAFSGMQLMLFASHENWVREVRFHPSGKYALSAGEDKTIRVFDIETGRCVRTLDDAHSHFVTCLDVXXXXXXXXXXXXXXIINVWEC 460          
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Match: A0A329RP37_9STRA (Lissencephaly-1 homolog n=16 Tax=Peronosporaceae TaxID=4777 RepID=A0A329RP37_9STRA)

HSP 1 Score: 284 bits (727), Expect = 3.370e-88
Identity = 216/462 (46.75%), Postives = 265/462 (57.36%), Query Frame = 0
Query:    1 MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRGLLEKKWTSVVRLQRKVMDLEARLDQAQEDLK-SGMRPGREKGGAAGSERILPRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGGAGGADCLKTLRGHDHNVSCVAWVPP-AGDXXXXXXXXXXXXXXXAATGYCTRTLK-GDSEWVRRVALSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVVESVAFAPQSAERTLSTV----------------------------GSADGEGAG-----------RGRFIASGSRDKTVKLWNASVGQCLMSFSVHENWVRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMHKTSPIVVSGGVDRELHVWEC 420
            MVLT KQR D+H  ML+Y++G G  FA+ AAAF   A +  S+  +   GLLEKKWTSV+RLQRKVM+LE +L Q +E+ K  G+   R+  GA      LPRAPAK  L GHR+P+TCVA HP++SV+ S SEDA+VKVWD+ETGE ERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS  G    +CL+TLRGHDHNV  + + P  A D                +TGYC  TL  G ++WVR VA+SDDG                              HVVESV FA    E+ +  +                             S+ GE  G           R +F+ SGSRD+TV+LW A  G  LM F+ HENWVR V  HPSG + LSA +D+++R FDV TGR  R L++AH HFVT L +               ++VWEC
Sbjct:    1 MVLTDKQRQDLHQAMLDYLVGMGERFADTAAAFEKEADVTKSSDGK-HAGLLEKKWTSVIRLQRKVMELETKLAQLEENAKLGGVLSRRDVLGARQRTEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSGSEDASVKVWDFETGEYERTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDGD--YECLRTLRGHDHNVCGIVFGPDLASDRLYSCSRDNTIKVWELSTGYCVNTLNAGHTDWVRDVAVSDDGLYLASCGNDRSILFWDLQHMRVLQSIREHEHVVESVVFAKTGQEQVIEKIHSKKLAATGALAPANGSVSPKSNNHDMTASSAGEPTGAVAVASVPTVRRMKFLLSGSRDRTVRLWEAFSGMQLMMFASHENWVREVRFHPSGKYALSAGEDKTIRVFDVDTGRCVRTLDEAHSHFVTCLDVXXXXXXXXXXXXXXIINVWEC 459          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1C0_ECTSI1.070e-20090.07Lissencephaly-1 homolog n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKZ3_9PHAE2.620e-12689.74Ge1_WD40 domain-containing protein (Fragment) n=1 ... [more]
A0A5D6Y4C8_9STRA4.830e-10249.56Lissencephaly-1 homolog n=1 Tax=Pythium brassicum ... [more]
A0A2D4CDK0_PYTIN4.700e-9747.66Lissencephaly-1 homolog n=2 Tax=Pythium insidiosum... [more]
K3WAC5_GLOUD3.580e-9546.90Lissencephaly-1 homolog n=1 Tax=Globisporangium ul... [more]
A0A484E3V1_BRELC1.160e-9447.39Lissencephaly-1 homolog n=1 Tax=Bremia lactucae Ta... [more]
A0A8K1CCN7_PYTOL5.160e-9452.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WCC4_9STRA2.500e-9247.91Lissencephaly-1 homolog n=1 Tax=Albugo laibachii N... [more]
H3H2U3_PHYRM6.200e-8947.30Lissencephaly-1 homolog n=3 Tax=Peronosporaceae Ta... [more]
A0A329RP37_9STRA3.370e-8846.75Lissencephaly-1 homolog n=16 Tax=Peronosporaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
NoneNo IPR availableGENE3D1.20.960.30coord: 1..86
e-value: 1.9E-23
score: 84.1
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 1..421
NoneNo IPR availablePANTHERPTHR44129:SF6PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB SUBUNIT ALPHAcoord: 1..421
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 170..184
score: 38.34
coord: 128..142
score: 37.89
coord: 321..335
score: 37.92
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 144..183
e-value: 3.3E-14
score: 63.2
coord: 276..334
e-value: 2.9E-8
score: 43.5
coord: 337..376
e-value: 3.1E-7
score: 40.0
coord: 102..141
e-value: 4.9E-8
score: 42.7
coord: 234..273
e-value: 4.4E-9
score: 46.2
coord: 379..419
e-value: 7.3E-4
score: 28.8
coord: 191..231
e-value: 4.5E-9
score: 46.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 390..418
e-value: 0.0032
score: 18.3
coord: 277..334
e-value: 3.6E-6
score: 27.6
coord: 236..273
e-value: 1.1E-5
score: 26.1
coord: 193..230
e-value: 6.0E-8
score: 33.2
coord: 108..141
e-value: 1.8E-6
score: 28.6
coord: 145..183
e-value: 2.9E-11
score: 43.7
coord: 338..375
e-value: 2.1E-7
score: 31.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 198..240
score: 13.817
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 151..187
score: 17.025
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 241..282
score: 12.981
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 109..150
score: 16.357
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 344..385
score: 11.812
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 318..343
score: 10.107
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 387..421
score: 11.611
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 106..421
e-value: 4.9E-115
score: 385.5
IPR017252Dynein regulator LIS1PIRSFPIRSF037647LisHcoord: 1..420
e-value: 1.1E-137
score: 455.0
IPR017252Dynein regulator LIS1HAMAPMF_03141lis1coord: 1..419
score: 35.596
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 321..335
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 170..184
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 406..420
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 218..232
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 109..421
score: 66.492
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 103..418
IPR037190LIS1, N-terminalSUPERFAMILY109925Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domaincoord: 2..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:164778..171428 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.770.1mRNA_C-linearis_contig102.770.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 163745..171465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.770.1 ID=prot_C-linearis_contig102.770.1|Name=mRNA_C-linearis_contig102.770.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=422bp
MVLTQKQRNDMHVGMLEYMMGQGGEFAEAAAAFAAAAGLEDSTGNEGFRG
LLEKKWTSVVRLQRKVMDLEARLDQAQEDLKSGMRPGREKGGAAGSERIL
PRAPAKAVLAGHRNPVTCVALHPLYSVVASSSEDATVKVWDYETGECERT
LKGHTNVVQSVAFSPDGQRLASCGADTTIKIWDFSEGGAGGADCLKTLRG
HDHNVSCVAWVPPAGDTLVSCSRDQTIKFWEAATGYCTRTLKGDSEWVRR
VALSDDGEMLASCGNDQSVKVWSVHGGQCLHELREHTHVVESVAFAPQSA
ERTLSTVGSADGEGAGRGRFIASGSRDKTVKLWNASVGQCLMSFSVHENW
VRCVLVHPSGAFVLSASDDRSVRAFDVKTGRSARKLEDAHGHFVTALAMH
KTSPIVVSGGVDRELHVWECR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017252Dynein_regulator_LIS1
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
IPR037190LIS1_N