mRNA_C-linearis_contig102.767.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig102.767.1
Unique NamemRNA_C-linearis_contig102.767.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: A0A6H5JT49_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT49_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 5.200e-107
Identity = 169/233 (72.53%), Postives = 189/233 (81.12%), Query Frame = 2 
Query:   71 VAFVMLGLVVSCAGFALPPNARRWPSNADRGPLKNSSR--CRSRT-AXXXXXXXAQMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILPAFPFA 760
            +  +MLGL+  C GFA+PP ARR   NA RG  +  S+  C S T +        +MSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAM+A+TGILVQS V FPG PPFPVS+PARPL VLKGLLS+E  +V+LFLL  G VELTIGKQDYVDRAPGELG+FG FAKPVD+EEW+KVQMAE+KHGRLAMLGV GCL QELVTG+GP+EQL  GNI   FPFA
Sbjct:    5 ITLMMLGLIAGCGGFAVPPTARRLRPNAARGCWRRPSQNGCHSSTRSRSSSAARIEMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMLAVTGILVQSFVHFPGFPPFPVSNPARPLAVLKGLLSTEGNNVVLFLLGTGVVELTIGKQDYVDRAPGELGEFGAFAKPVDKEEWDKVQMAELKHGRLAMLGVVGCLVQELVTGEGPVEQLLNGNI---FPFA 234
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: A0A835ZIK7_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 5.530e-50
Identity = 87/173 (50.29%), Postives = 120/173 (69.36%), Query Frame = 2 
Query:  227 QMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILP 745
            +M++++M+GAD+E+ G++DPL  SKD+ +LF+ R VELKHGRVAM+A  G+LVQS    P     PV    RPL  L  +L+  P +     L +GA EL+IGKQDY ++APG++  FG F KP D +EWEK+Q+ E+K+GRLAM+   G   QE +TGQGP+EQL  G+I P
Sbjct:   12 RMAVQDMLGADIETSGVWDPLRLSKDDGNLFKYREVELKHGRVAMLATLGVLVQSFNHLPD----PVFSNPRPLAALSQILAERPVAFWQIFLAVGAFELSIGKQDYENKAPGDIATFGDFVKPSDEDEWEKIQLRELKNGRLAMVASIGMFVQEALTGQGPIEQLQVGHISP 180
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: A0A835ZAI4_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI4_9STRA)

HSP 1 Score: 178 bits (451), Expect = 9.360e-50
Identity = 94/173 (54.34%), Postives = 122/173 (70.52%), Query Frame = 2 
Query:  227 QMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILP 745
            +MS+ +M+G DVE+GGLFDPLGFSKDE SLFRRRAVELKHGR+ M+A  G+LVQ+ V    LP    S+P RP+  L  +L   P + +  LL IG +ELT G QDY ++APG+LG FG   KP D  E  ++Q+ E+K+GRLAM+G+ G L QE +T QGP+EQL  G+  P
Sbjct:   40 RMSVEDMVGIDVETGGLFDPLGFSKDEASLFRRRAVELKHGRICMLATFGVLVQTYVH---LPDAVFSNP-RPIGALLQVLDQRPVAAIQILLAIGLLELTAGAQDYANKAPGDLGRFGDAFKPDDAGELAELQLKELKNGRLAMMGIMGMLVQEGLTKQGPIEQLLVGHTSP 208
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: A0A0G4GDB0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GDB0_VITBC)

HSP 1 Score: 167 bits (422), Expect = 1.610e-45
Identity = 92/174 (52.87%), Postives = 117/174 (67.24%), Query Frame = 2 
Query:  227 QMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSL-VRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILP 745
            +MS+ EMIGADVE+GG+FDPL FS+DE SLFRRRAVELKHGR+AM+A  G  VQS  V  P     PV    RPL  L  +L+  P +    +  I A+EL  G+QDY ++APG+LG FG   K  D EE+ K Q+ E+K+GRLAM+G+ G + QE +TGQ   EQ+  GNI P
Sbjct:   43 KMSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPD----PVFSEPRPLSALTKVLTERPWAAAQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINP 212
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: D8LBT8_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT8_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 2.430e-45
Identity = 87/169 (51.48%), Postives = 115/169 (68.05%), Query Frame = 2 
Query:  245 MIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDY--VDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILP 745
            M+GA  E+GG+FDPLG + DE SL+RRR  ELKHGRV M+A  G+LVQS V+FP  P        RPL  L  +    P  +L  + ++G +ELTIG++DY   +  PG+LGDF   A+P D + W + Q+ E+KHGRLA LG++G LAQELVT +GP+EQL KG+I P
Sbjct:    1 MVGASEETGGVFDPLGLATDETSLYRRRVAELKHGRVCMLATVGVLVQSFVQFPD-PDRSAFSNTRPLGALFQVWRERPVILLGIVALMGLIELTIGREDYGSSEAEPGKLGDFWQAARPEDPQLWRRRQLQELKHGRLASLGITGMLAQELVTHEGPVEQLLKGDINP 168
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: D5KBP8_ELYCH (Light harvesting complex protein 3 (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=D5KBP8_ELYCH)

HSP 1 Score: 163 bits (412), Expect = 6.030e-45
Identity = 82/148 (55.41%), Postives = 105/148 (70.95%), Query Frame = 2 
Query:  278 FDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQ 721
            +DPLGFSKDE SLFRRR VELKHGR+ M+A  G+ VQ+ +  P     PV    RP+  L  + +  P ++   +L IGA+EL+IGKQDY ++APG+LG FG FAKP D  EWEKVQ+ E+K+GRLAM+ + G L QE +T QGPLEQ
Sbjct:    1 WDPLGFSKDEASLFRRRVVELKHGRICMLATLGVFVQNSIHLPD----PVFSNPRPIGALLQVFAERPIAIWQIILAIGAIELSIGKQDYENKAPGDLGSFGDFAKPSDPIEWEKVQLRELKNGRLAMMAIMGMLVQEGLTKQGPLEQ 144
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: W7U405_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U405_9STRA)

HSP 1 Score: 164 bits (416), Expect = 9.620e-45
Identity = 90/173 (52.02%), Postives = 119/173 (68.79%), Query Frame = 2 
Query:  227 QMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILP 745
            +M++ EMIG+DVE+ G+FDPLG +KDE SL+R R +ELKHGRVAM+A  G LVQS   F  LP    S+P RPL  L  + S  P +     L IGA+ELTIGKQD  +RAPG++G FG    P D E++  +Q+ E+K+GRLAM+ + G   QE +TGQGP+EQL +G+  P
Sbjct:   31 RMAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQS---FYHLPDEVFSNP-RPLAALAQVYSERPVAFWQIFLAIGAIELTIGKQDTANRAPGDVG-FGAAFIPDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSP 198
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: A0A6H5KVZ6_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVZ6_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.510e-44
Identity = 86/173 (49.71%), Postives = 117/173 (67.63%), Query Frame = 2 
Query:  233 SIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDY--VDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILP 745
            ++ EM+GA  E+GG+FDPLG + DE SL+RRR  ELKHGRV M+A  G+LVQS V+FP  P        RPL  L  +    P  +L  + ++G +ELTIG++DY   +  PG+LG+    A+P D + W + Q+ E+KHGRLA LG++G LAQELVT +GP+EQL KG+I P
Sbjct:   52 AVSEMVGASEETGGVFDPLGLATDETSLYRRRVAELKHGRVCMLATVGVLVQSFVQFPD-PDRSAFSNTRPLGALFQVWRERPVILLGIVALMGLIELTIGREDYGSSEAEPGKLGELWQTARPEDPQLWRRRQLQELKHGRLASLGITGMLAQELVTHEGPVEQLLKGDINP 223
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BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: W7TRI0_9STRA (Light-harvesting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRI0_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.840e-44
Identity = 91/172 (52.91%), Postives = 113/172 (65.70%), Query Frame = 2 
Query:  230 MSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILP 745
            MS  +MIG DVE+GGLFDPLGFSKDE SL++ R VELKHGRVAM+A  G LVQS    P      V    RPL  L  LLS  P ++L  ++ I  +E+T GKQD  + APG+LG FG   KP    E   VQ+ E+K+GRLAM+ + G   QEL+TGQGP+EQ+  G+I P
Sbjct:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPD----DVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQD-PELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISP 167
[Close]
BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Match: A0A835Z571_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z571_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.700e-41
Identity = 86/173 (49.71%), Postives = 119/173 (68.79%), Query Frame = 2 
Query:  227 QMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLVIGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLAMLGVSGCLAQELVTGQGPLEQLFKGNILP 745
            +MS+ E+IGAD E+GG++DP GF+KD+ +L++ R VELKHGRVAM+A  G+LVQS V  P  P F  +D ARP      L SS P+++    L  GAVEL + KQD  ++APG+LG FG +  P   EE E +Q+ E+K+GRLAM+ + G   QE +TGQGP+EQ+  G++ P
Sbjct:   39 RMSVEELIGADTETGGVWDPAGFAKDDAALYKYREVELKHGRVAMLATLGVLVQSFVTLPD-PVF--ADGARPQTAAFELASSRPEALAQIFLACGAVELLVLKQD-PEKAPGDLG-FGAY--PDTEEELEVLQLKELKNGRLAMMAIVGMFVQEKLTGQGPIEQILAGHVSP 204
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT49_9PHAE5.200e-10772.53LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835ZIK7_9STRA5.530e-5050.29Chlorophyll a/b-binding protein domain-containing ... [more]
A0A835ZAI4_9STRA9.360e-5054.34Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A0G4GDB0_VITBC1.610e-4552.87Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
D8LBT8_ECTSI2.430e-4551.48Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D5KBP8_ELYCH6.030e-4555.41Light harvesting complex protein 3 (Fragment) n=4 ... [more]
W7U405_9STRA9.620e-4552.02Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A6H5KVZ6_9PHAE2.510e-4449.71LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
W7TRI0_9STRA2.840e-4452.91Light-harvesting protein n=1 Tax=Nannochloropsis g... [more]
A0A835Z571_9STRA3.700e-4149.71Light harvesting complex protein n=1 Tax=Tribonema... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:44234..47759 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score142.9
Seed ortholog evalue1.9e-31
Seed eggNOG ortholog2880.D7FPU8
KEGG koko:K08907
KEGG Pathwayko00196,map00196
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S44M@2759
Ec32 ortholog descriptionLight harvesting complex protein (probable pseudogene)
Ec32 orthologEc-00_005570.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons5
Model size1393
Cds size705
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927367.5496566-UTR-C-linearis_contig102:44233..448631622927367.5496566-UTR-C-linearis_contig102:44233..44863Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 44234..44863 -
1690879657.1392772-UTR-C-linearis_contig102:44233..448631690879657.1392772-UTR-C-linearis_contig102:44233..44863Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 44234..44863 -
1622927367.6233757-UTR-C-linearis_contig102:47701..477591622927367.6233757-UTR-C-linearis_contig102:47701..47759Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 47702..47759 -
1690879657.2002327-UTR-C-linearis_contig102:47701..477591690879657.2002327-UTR-C-linearis_contig102:47701..47759Chordaria linearis ClinC8C monoicousUTRC-linearis_contig102 47702..47759 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927367.5591948-CDS-C-linearis_contig102:44863..448901622927367.5591948-CDS-C-linearis_contig102:44863..44890Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 44864..44890 -
1690879657.1514537-CDS-C-linearis_contig102:44863..448901690879657.1514537-CDS-C-linearis_contig102:44863..44890Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 44864..44890 -
1622927367.567625-CDS-C-linearis_contig102:45479..456741622927367.567625-CDS-C-linearis_contig102:45479..45674Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 45480..45674 -
1690879657.1611705-CDS-C-linearis_contig102:45479..456741690879657.1611705-CDS-C-linearis_contig102:45479..45674Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 45480..45674 -
1622927367.5778298-CDS-C-linearis_contig102:46410..465991622927367.5778298-CDS-C-linearis_contig102:46410..46599Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 46411..46599 -
1690879657.175848-CDS-C-linearis_contig102:46410..465991690879657.175848-CDS-C-linearis_contig102:46410..46599Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 46411..46599 -
1622927367.5916028-CDS-C-linearis_contig102:46899..469611622927367.5916028-CDS-C-linearis_contig102:46899..46961Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 46900..46961 -
1690879657.1842713-CDS-C-linearis_contig102:46899..469611690879657.1842713-CDS-C-linearis_contig102:46899..46961Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 46900..46961 -
1622927367.6132064-CDS-C-linearis_contig102:47469..477011622927367.6132064-CDS-C-linearis_contig102:47469..47701Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 47470..47701 -
1690879657.1924486-CDS-C-linearis_contig102:47469..477011690879657.1924486-CDS-C-linearis_contig102:47469..47701Chordaria linearis ClinC8C monoicousCDSC-linearis_contig102 47470..47701 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.767.1prot_C-linearis_contig102.767.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig102 44864..47701 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig102.767.1

>prot_C-linearis_contig102.767.1 ID=prot_C-linearis_contig102.767.1|Name=mRNA_C-linearis_contig102.767.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=235bp
MIPGVAFVMLGLVVSCAGFALPPNARRWPSNADRGPLKNSSRCRSRTAAA
AAAAAAQMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVA
MIAITGILVQSLVRFPGLPPFPVSDPARPLVVLKGLLSSEPKSVLLFLLV
IGAVELTIGKQDYVDRAPGELGDFGGFAKPVDREEWEKVQMAEIKHGRLA
MLGVSGCLAQELVTGQGPLEQLFKGNILPAFPFA*
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mRNA from alignment at C-linearis_contig102:44234..47759-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.767.1 ID=mRNA_C-linearis_contig102.767.1|Name=mRNA_C-linearis_contig102.767.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3526bp|location=Sequence derived from alignment at C-linearis_contig102:44234..47759- (Chordaria linearis ClinC8C monoicous)
CTGATTTCTCTGATTTTGGCACCCTGGCCACCTGGCCTCAGCGATCCACA
GCAGCACCATGATTCCAGGGGTTGCATTCGTGATGCTAGGGCTTGTTGTG
AGTTGTGCGGGCTTCGCCTTGCCACCCAACGCTCGAAGATGGCCATCAAA
CGCCGATAGAGGCCCCTTGAAAAACAGCAGCAGGTGCCGCTCACGAACAG
CAGCAGCAGCAGCAGCAGCGGCCGCGCAAATGTCGATTCGCGAAATGATC
GGCGCGGACGTCGAGAGCGGAGGCTTGTTCGATCCACTTGGTAAGAGGGA
GAGAGGGGGAGAGAGGGGTTTTAAAGATGACGGACGCAATGAGACCCTCT
GTAGAGTGCAATCGCTGGATGTGCTTGTCTTGGAAATTCAAAAGTTGGCT
TCATGACAAGAGGAGAGAGTTCACACATGACCGGCGGCACAGCGATAGCA
ACTCGCGGGCTAATAGCTCTAGTCTATCTATTATTGCTGCTACTGGTATT
GTCACTGCACCTTACTGATCTGTAGATTCTCAACACTAGAACGGGCCTGT
TGGCCATGGACTATTTACTATTTGGACAGAGCCGTAGGTGGAGATATGTA
AGGTGTGCCCTACATGTAGAGCTGCGGCGGCTACCGTACGTCGATCTGCT
TTTAGACGCACAATCTTCCCCACCTGCACCAATGGCAGAAAACTCTGCTC
AAGGACGTATCCCAAACAATGTTTCCAGCTGTCATTTCTCAAAAGCAGTA
GTGTACACCAGGTAATCGTCCTAGTAATCGTACTTTTGATGTCCTCAGGA
TTTTCGAAGGACGAGCCCTCGTTGTTCCGACGGCGCGCCGTCGAGCTCAA
GCATGGCAGGGTAAGAGATACGGGGGTAGGGGGCGGACGCTCAGCTGAAG
GACAAGAACGTAGAGAGATAAACAGATGCAGATAGAGTCACCTTGCCGTC
GTCCTTCGGCTGTAATTGTCTGTTGCCGTCGCCGGTTGTGCGTTTTCCAA
GCGAAAGCTACAGAAGTGGCAGCACGCACGTAGTTCATGGCTTCCTTCCT
TTCTGTGCCTCCTCTTCGCCTCCCGCTTCAAATGGGTGGCGAGACTTGCC
GTTAAATGATCACAACAACAGCCCCGTCGCATCGTACGCACCCTGCACCC
ACCCAAACAGGTAGCGATGATAGCTATCACGGGCATCTTGGTGCAGTCCT
TGGTGCGGTTCCCCGGCTTGCCTCCCTTTCCCGTGTCCGATCCAGCGCGC
CCTCTGGTGGTGCTGAAAGGGCTCTTGTCGTCCGAGCCGAAGAGCGTACT
GCTGTTCTTGCTGGTCATTGGGGCGGTGGAGCTCACGATAGGAAAGCAGG
TGTGTGTGTGTGTGGTGGGGGCTCGTTCGTTGGTGCAGCGGAGCCGTAAA
GGGGCTGAGCAACGCGTGGCATCATTATCATTGCACGACATGCGACAGCC
AGGCAACGCGTTTGTGCTTTTTATTTGCGTTGATTAAACACAACTTTCTA
CGGCAGGACGCCCCCTGGAATCGCTGCTCATAGCGTTGCGCTTTTGGTAG
TGCACGGTCCGTGCGTTTGCGTATATTATCTGTAACTCTCGAGCAATCGC
GTTGTGTCTCCGCCACGCAAGCTCGTTTGGTTCTAGCCACACCCACCTAT
TCGCAGTCGGCCCTTGCGTTTACCATCACCGCTATGGCAGCGTCGACTGT
GTTCAGCGAAGTGGTTCACGCCCCGCGAATGCCAGGGGGGGCAGCTGTGT
GTCTGGTGGGGATGACGTGGCGACATTTGGCTTGAAGCGATCTCGGCTTC
GGTGACGAAACCCAAGCTCGCCAAGAACATCTAGGTGCTCTGTCTACGTG
CCGTTGTTATTGTTGTTGTAGTTGTTGTTGGTGGTGGTGGTGGTCATGTT
GCATCAGCGATGGTAAGTGTTCACATTAATGCGACTGCGGGGTTGGGGGG
GGCGGAGGTTGGCCTTTGAACCCCGGCCTGCTGGTGTGGCTTACCGACAT
CCCGAAACCGCTGAGCTCTCCGAAATGCAATGCCAACGGTTGTCAACGGA
TTTGTTACGGCGATATCACCATGGTGGCAACCTAGGATTACGTTGACAGA
GCGCCGGGAGAGCTGGGTGACTTCGGTGGGTTCGCGAAGCCGGTGGACAG
AGAGGAGTGGGAGAAGGTGCAGATGGCGGAGATCAAGCACGGTCGGCTGG
CGATGCTGGGCGTGTCGGGATGCTTAGCCCAGGAGCTGGTGACAGGGCAG
GGTCCCTTGGAGCAGCTCTTCAAGGGAAACGTGCGTAAGCGAGAGAGACG
GGGGTGGAAGAGGTAGAGACCAGAGGGAGGAAACTAGTTAGGGAGATGCG
TGCGTAACTGTATCGTTGGCGAGTTGTCTTTCACGGGAAGATGGGAACGA
CAAACACGGAGCGCAATACGCCTTCCTTGAAATCTGTCTTGTTGTCGTCG
CCATTTTGACGCATTGGTCACTGGCATCGCCAACGACGCTTCTCGCCGTC
AAGCTCTTTTTTGGATTGCCAACCTTTGATTCACCCCCGCTGCGCTTAGC
GTGCGCGTTTGATTTTCCGCAGTGCCTGACTGACCGCCTCACGAAAGCCT
GACGTGCTCCGTCCGTCGCGGAATATTTGTAAGGAAACCTACGGCGCGCT
GGGAAGTATTAGGCCGCCGCGCCTTCTTTGAAGCGGAAAGGATTGAGGTT
AAATTCAGTGCTGGCACACTATCCATCAACCATTACATGATGCTGCAGCA
CCGCCGTGCCTTAACCCCCGAACCTCCCACGCCCTACCCTGCTTGGTCCA
CCGTTGTGCTGCCTTGCGTGCTATCTGCTGTGCTTGCCTACCGCTTCGTG
TGTTTTCCTCCGCCGCCAGATACTGCCAGCATTCCCGTTCGCGTAGAGGA
AACAACACTCTGGTTTGGACCTGCCCCGTGCCTGCATGAACACCTCCCTG
TGGTGGTTCTTGTCGTGGGGATCGGAAGATTGTTGCGTTTGCCCACCGCA
GTTAGGACAGGTATTCACCGCGCGTCTTGAAAATACGGGGTGCGCGCGAG
GGGAGACAGGGCGAGAGAAGGCCACCAGCTCGTTTTTTGTTGCCTTGGCC
GCACGTGTAGCTTCGAGCGCGGAGGGGTGGGGTCCCTGCTGTGTATAGTG
TGTATAGGGGCAGTGTTTCTGGTTGTTTTTGGTGGAATGGCAAGTGAACT
GGTGGAGGCGATTGCAACTGCCATCTTTGGTATCGCGAACTCAATGTGCC
GTGTAAATGTTATGATGGGCACGGTCTGTTTTGTCGGTCTCGTTGGATGT
TTGTGGGTGTTTTTTGCGCACTCGTGTGGTTTGTCGATGGCTTCAATCTT
TCTTTGGCTATGTACGTGGTATGATTTTGTTTTTTTGAGCGGGGTTCATA
AACGCCTCGCCGTTCCCGCGAAAGAGGCAGGCTTAGCACAGATAGCAACT
GTCAGTGCGAGTTGAAGTTTGCTCTGCAACAACGACTCCTGCCACCCCCA
TCGGCCCTCCCGGTCGGCGTTGTCGG
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Coding sequence (CDS) from alignment at C-linearis_contig102:44234..47759-

>mRNA_C-linearis_contig102.767.1 ID=mRNA_C-linearis_contig102.767.1|Name=mRNA_C-linearis_contig102.767.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at C-linearis_contig102:44234..47759- (Chordaria linearis ClinC8C monoicous)
ATGATTCCAGGGGTTGCATTCGTGATGCTAGGGCTTGTTGTGAGTTGTGC
GGGCTTCGCCTTGCCACCCAACGCTCGAAGATGGCCATCAAACGCCGATA
GAGGCCCCTTGAAAAACAGCAGCAGGTGCCGCTCACGAACAGCAGCAGCA
GCAGCAGCAGCGGCCGCGCAAATGTCGATTCGCGAAATGATCGGCGCGGA
CGTCGAGAGCGGAGGCTTGTTCGATCCACTTGATGATTCCAGGGGTTGCA
TTCGTGATGCTAGGGCTTGTTGTGAGTTGTGCGGGCTTCGCCTTGCCACC
CAACGCTCGAAGATGGCCATCAAACGCCGATAGAGGCCCCTTGAAAAACA
GCAGCAGGTGCCGCTCACGAACAGCAGCAGCAGCAGCAGCAGCGGCCGCG
CAAATGTCGATTCGCGAAATGATCGGCGCGGACGTCGAGAGCGGAGGCTT
GTTCGATCCACTTGGATTTTCGAAGGACGAGCCCTCGTTGTTCCGACGGC
GCGCCGTCGAGCTCAAGCATGGCAGGGATTTTCGAAGGACGAGCCCTCGT
TGTTCCGACGGCGCGCCGTCGAGCTCAAGCATGGCAGGGTAGCGATGATA
GCTATCACGGGCATCTTGGTGCAGTCCTTGGTGCGGTTCCCCGGCTTGCC
TCCCTTTCCCGTGTCCGATCCAGCGCGCCCTCTGGTGGTGCTGAAAGGGC
TCTTGTCGTCCGAGCCGAAGAGCGTACTGCTGTTCTTGCTGGTCATTGGG
GCGGTGGAGCTCACGATAGGAAAGCAGGTAGCGATGATAGCTATCACGGG
CATCTTGGTGCAGTCCTTGGTGCGGTTCCCCGGCTTGCCTCCCTTTCCCG
TGTCCGATCCAGCGCGCCCTCTGGTGGTGCTGAAAGGGCTCTTGTCGTCC
GAGCCGAAGAGCGTACTGCTGTTCTTGCTGGTCATTGGGGCGGTGGAGCT
CACGATAGGAAAGCAGGATTACGTTGACAGAGCGCCGGGAGAGCTGGGTG
ACTTCGGTGGGTTCGCGAAGCCGGTGGACAGAGAGGAGTGGGAGAAGGTG
CAGATGGCGGAGATCAAGCACGGTCGGCTGGCGATGCTGGGCGTGTCGGG
ATGCTTAGCCCAGGAGCTGGTGACAGGGCAGGGTCCCTTGGAGCAGCTCT
TCAAGGGAAACGATTACGTTGACAGAGCGCCGGGAGAGCTGGGTGACTTC
GGTGGGTTCGCGAAGCCGGTGGACAGAGAGGAGTGGGAGAAGGTGCAGAT
GGCGGAGATCAAGCACGGTCGGCTGGCGATGCTGGGCGTGTCGGGATGCT
TAGCCCAGGAGCTGGTGACAGGGCAGGGTCCCTTGGAGCAGCTCTTCAAG
GGAAACATACTGCCAGCATTCCCGTTCGCGTAGATACTGCCAGCATTCCC
GTTCGCGTAG
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