mRNA_C-linearis_contig101.744.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig101.744.1
Unique Name	mRNA_C-linearis_contig101.744.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: D7FJI8_ECTSI (TCTP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI8_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 1.190e-110
Identity = 161/176 (91.48%), Postives = 171/176 (97.16%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVVC-DGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDPFKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
            MIVYKDLISGDEMMTDAFPQNPVV  DGET+EGMFEVES+T +KGSDNVDIGCGNAFGG+EE VDDSVEKVNNVIDPFKYTEVPFGSK+ELK+YLK+YVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLL KFADMQTFAGESMTAEGGMAFGYYK+GAHNPTFAYISKA++AEK
Sbjct:    1 MIVYKDLISGDEMMTDAFPQNPVVGNDGETVEGMFEVESSTAVKGSDNVDIGCGNAFGGEEEVVDDSVEKVNNVIDPFKYTEVPFGSKTELKDYLKEYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLSKFADMQTFAGESMTAEGGMAFGYYKDGAHNPTFAYISKAMEAEK 176

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: A0A835YS00_9STRA (Mss4-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS00_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.480e-67
Identity = 109/178 (61.24%), Postives = 132/178 (74.16%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVVCD-GETIEGMFEVESATTIKGSDNVDIGCGNAFGG--DEEAVDDSVEKVNNVIDPFKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
            MIVY D+++GDEMMTDAF + PV+ D G  +EG+FEVES   +KGS  VDIGCGN+FGG  D+EAVDD+VEKVNNVID F ++E PFGSK+E KEYLK+YV  +R   KE G PQPEIK FMA APG+VKFLL K+ D+Q + G S   +G M+F YYKEGA  P F +I   L  EK
Sbjct:    1 MIVYTDMVTGDEMMTDAFKKLPVLDDEGNPVEGLFEVESQVIVKGSTEVDIGCGNSFGGGGDDEAVDDAVEKVNNVIDSFNFSECPFGSKTEFKEYLKEYVVKLRGMFKEAGKPQPEIKAFMATAPGIVKFLLSKYNDLQFYVGASYDPQGAMSFSYYKEGATTPNFMFIEGGLKVEK 178

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: H6WBA0_VAULI (TCTP domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA0_VAULI)

HSP 1 Score: 209 bits (531), Expect = 4.050e-65
Identity = 109/179 (60.89%), Postives = 128/179 (71.51%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGD--EEAVDDSVEKVNNVIDPFKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEKV 618
            MIVY DLISGDEMMTDAF   PV+   GE +EG+FEVES   +KG DNVDIGCGN+FGG   +E VDDSVEKVNN+I  F  +E PFGS++E KEYLK+YV+ VR  LK+ GTPQP+IK FMA AP MVKFLL  + + Q + G S    G MAF YYKEGA  P+F +I   L   KV
Sbjct:    1 MIVYADLISGDEMMTDAFKIKPVMNSKGEKVEGLFEVESEIIVKGGDNVDIGCGNSFGGGGADEIVDDSVEKVNNIISSFNLSECPFGSRNEFKEYLKEYVKKVRTALKDSGTPQPQIKAFMAIAPDMVKFLLENYKEYQFYTGSSYDPSGAMAFAYYKEGALTPSFVFIEAGLKVTKV 179

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: A0A4V8H021_9STRA (NoTCTP n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4V8H021_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.870e-52
Identity = 90/179 (50.28%), Postives = 119/179 (66.48%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVVCDGETIEGMFEVESATTIKGSDNVDIGCGNAFGG--DEEAVDDSVEKVNNVIDP--FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
            MIVYKD+ISGDE+++DA    PV+  GE + G+FEV+SA    G  ++DIGCGNAFGG  D+E  DD+ +K NNV  P  F YT +PF SK E K ++KDYVR+VR  LK  G    +IK+FM +AP  VK+L+ K+ D++ F  +SM  + G+ F YYKEGAH PTF Y+       K
Sbjct:    1 MIVYKDVISGDEVVSDALKITPVMEGGEEVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGDDEGADDATQKENNVSGPSSFAYTAMPFSSKGEFKSWVKDYVRNVRQALKGSGVAVEDIKKFMEEAPTFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKEGAHCPTFVYVKSGYKVVK 179

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: A0A225VK44_9STRA (TCTP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VK44_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.030e-45
Identity = 86/179 (48.04%), Postives = 114/179 (63.69%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
            M+V++D+ + DE+M+D+F   P    +G  + GMF+VES T  KG+DNVDIGCG+AFGG+EEAVDDSVE VNNVID    F Y E  F +K+ELK YLK + R V   LK        + +F + A  +VKFL+  F ++Q +  +S  +E GMA+ YY EGA  PTF YI   L   K
Sbjct:    1 MLVWQDIFTEDEVMSDSFKVVPCKDLEGNEVSGMFQVESKTVAKGADNVDIGCGDAFGGEEEAVDDSVETVNNVIDESVGFGYNETGFDTKAELKTYLKSFFRKVMKNLKSSDASDETLAQFKSDAQEIVKFLVSMFKELQFYMFKSFDSEAGMAYAYYPEGAIAPTFCYIKWGLKEVK 179

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: A0A6V1UMP4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UMP4_HETAK)

HSP 1 Score: 156 bits (395), Expect = 1.590e-44
Identity = 85/180 (47.22%), Postives = 116/180 (64.44%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVVC-DGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAV-DDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
            M+VYK + + DE+M+D++    +V  DGE + G+F VES     G  ++DIGCGNAFGGD++A  DD VEK NN+I     F  TE+PF SK+E K +LKDYVR VR+++K  G PQ EIK+ M +AP  VK+LL +++++Q + G SM  EG M F  +      PTF YI   L  EK
Sbjct:   34 MLVYKCMFTDDELMSDSYKIKDIVDEDGEVVPGLFGVESKIVAVGGGDIDIGCGNAFGGDDDAGGDDGVEKENNIISESAGFGLTEMPFNSKAEFKAFLKDYVRKVRSEMKSNGVPQEEIKQMMNEAPIFVKYLLSQYSELQFYVGRSMDPEGTMIFARFYGEDLTPTFVYIKAGLKQEK 213

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: M4C5S4_HYAAE (TCTP domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=M4C5S4_HYAAE)

HSP 1 Score: 150 bits (380), Expect = 1.060e-42
Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
            M+V++D+ + DE+M+D+   +P    +G  + GMF+VES T  KG+DNVDIGCG+AFGGD+E VDDSVE VNNVID    F Y E  F +K+ELK YLK Y R     LK        + +F + A  +VKFL+  F ++Q +  +S  +E G+A+ YY EGA  PTF YI   L   K
Sbjct:    1 MLVWQDVFTEDEVMSDSHKVSPCKDMEGNAVPGMFQVESKTVAKGADNVDIGCGDAFGGDDEQVDDSVETVNNVIDDSIGFGYIETGFDTKAELKTYLKSYFRKTMKHLKATEAGDEALAQFKSDAQEIVKFLVSMFKELQYYMFKSCDSEAGLAYAYYPEGAVAPTFCYIKWGLKEVK 179

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: A0A484DX33_BRELC (TCTP domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DX33_BRELC)

HSP 1 Score: 149 bits (376), Expect = 4.260e-42
Identity = 81/179 (45.25%), Postives = 111/179 (62.01%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
            M+V++D+ + DE+M+D+    P    +G  I GMF+VES    KG+DNVDIGCG+AFGGD+  VDDSVE VNN+ID    F Y E  F +++ELK YLK Y R +   LK  G  +  +  F   AP +VK+L+  F ++Q +  +S  +E G+A+ YY EGA  PTF YI   L   K
Sbjct:    1 MLVWQDVFTEDEVMSDSNKVIPCKDMEGNEISGMFQVESKMVAKGADNVDIGCGDAFGGDDAQVDDSVETVNNIIDDSIGFGYIETGFETRAELKTYLKSYFRKIMKHLKSTGVDEETLNRFKTDAPEIVKYLVSMFKELQFYMFKSCDSEAGLAYAYYPEGALAPTFCYIKWGLKEVK 179

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: A0A421GT19_9STRA (TCTP domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A421GT19_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.420e-42
Identity = 80/175 (45.71%), Postives = 111/175 (63.43%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKAL 603
            M+V++D+ + DE+M+D+    P    +G  + GMF+VES T  KGSDNVDIGCG+AFGG++EAVDDSVE VNNV+D    F Y E  F +K+ELK YLK Y R     LK        + +F + A  +VK+L+  F ++Q +  +S  +E G+A+ +Y EGA  PTF YI   L
Sbjct:    1 MLVWQDVFTEDEVMSDSLKVTPCKDMEGNEVSGMFQVESRTVAKGSDNVDIGCGDAFGGEDEAVDDSVETVNNVVDDSVGFGYVETGFDTKAELKTYLKSYFRKTMKHLKATDASDETLAQFKSDAQEIVKYLVSMFKELQFYMYKSCDSEAGLAYAWYPEGALAPTFCYIKWGL 175

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BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Match: H3GH26_PHYRM (TCTP domain-containing protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3GH26_PHYRM)

HSP 1 Score: 147 bits (371), Expect = 2.420e-41
Identity = 81/179 (45.25%), Postives = 110/179 (61.45%), Query Frame = 1

Query:   91 MIVYKDLISGDEMMTDAFPQNPVV-CDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKVNNVIDP---FKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKALDAEK 615
            M+V++D+ + DE+M+D+    P    +G  + GMF+VES T  KGSDNVDIGCG+AFGGD+E VDDSVE VN+VID    F Y E  F +K+ELK YLK Y R     LK       ++ +F   A  +VKFL+  F ++Q +  +S  +E G+A+ YY +GA  P F YI   L   K
Sbjct:    1 MLVWQDVFTEDEVMSDSNKVTPCKDMEGNLVSGMFQVESKTVAKGSDNVDIGCGDAFGGDDEQVDDSVETVNSVIDDTVGFGYIETGFDTKAELKTYLKSYFRKTMKHLKATNASDEDLAQFKTDAQEIVKFLVSMFKELQFYMFKSCDSEAGLAYAYYPDGAVAPIFCYIKWGLKEVK 179

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot

BLAST of mRNA_C-linearis_contig101.744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJI8_ECTSI	1.190e-110	91.48	TCTP domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A835YS00_9STRA	1.480e-67	61.24	Mss4-like protein n=1 Tax=Tribonema minus TaxID=30...	[more]
H6WBA0_VAULI	4.050e-65	60.89	TCTP domain-containing protein n=1 Tax=Vaucheria l...	[more]
A0A4V8H021_9STRA	2.870e-52	50.28	NoTCTP n=4 Tax=Monodopsidaceae TaxID=425072 RepID=...	[more]
A0A225VK44_9STRA	2.030e-45	48.04	TCTP domain-containing protein n=2 Tax=Phytophthor...	[more]
A0A6V1UMP4_HETAK	1.590e-44	47.22	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
M4C5S4_HYAAE	1.060e-42	46.37	TCTP domain-containing protein n=6 Tax=Peronospora...	[more]
A0A484DX33_BRELC	4.260e-42	45.25	TCTP domain-containing protein n=1 Tax=Bremia lact...	[more]
A0A421GT19_9STRA	4.420e-42	45.71	TCTP domain-containing protein n=5 Tax=Phytophthor...	[more]
H3GH26_PHYRM	2.420e-41	45.25	TCTP domain-containing protein n=14 Tax=Peronospor...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig101	contig	C-linearis_contig101:368133..375911 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	324.3
Seed ortholog evalue	4.1e-86
Seed eggNOG ortholog	2880.D7FJI8
Preferred name	TPT1
KEGG ko	ko:K20301
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000909,GO:0001932,GO:0001934,GO:0002181,GO:0003006,GO:0003674,GO:0005085,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005739,GO:0005768,GO:0005770,GO:0005771,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0007049,GO:0007093,GO:0007095,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0008017,GO:0008092,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008361,GO:0009058,GO:0009059,GO:0009314,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010212,GO:0010332,GO:0010389,GO:0010467,GO:0010494,GO:0010562,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010648,GO:0010941,GO:0010948,GO:0010972,GO:0012505,GO:0015631,GO:0016043,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019827,GO:0019899,GO:0019953,GO:0022402,GO:0022414,GO:0022603,GO:0023051,GO:0023057,GO:0030001,GO:0030003,GO:0030154,GO:0030234,GO:0030582,GO:0030584,GO:0031012,GO:0031056,GO:0031058,GO:0031155,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031570,GO:0031572,GO:0031573,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0033043,GO:0033044,GO:0033127,GO:0033129,GO:0033554,GO:0034305,GO:0034599,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0040008,GO:0040014,GO:0040018,GO:0042173,GO:0042174,GO:0042221,GO:0042325,GO:0042327,GO:0042592,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043900,GO:0043902,GO:0043937,GO:0043939,GO:0043943,GO:0043944,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044818,GO:0045595,GO:0045596,GO:0045786,GO:0045793,GO:0045927,GO:0045930,GO:0045937,GO:0046483,GO:0046872,GO:0048232,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051020,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060548,GO:0061458,GO:0062039,GO:0062040,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070796,GO:0070798,GO:0070838,GO:0070887,GO:0071214,GO:0071470,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071840,GO:0072503,GO:0072507,GO:0072511,GO:0075259,GO:0075260,GO:0075261,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090304,GO:0097708,GO:0098727,GO:0098771,GO:0098772,GO:0104004,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902058,GO:1902060,GO:1902229,GO:1902230,GO:1902275,GO:1902531,GO:1902532,GO:1902749,GO:1902750,GO:1903047,GO:1903664,GO:1903665,GO:1905269,GO:1990624,GO:1990904,GO:2000026,GO:2000241,GO:2000243,GO:2000383,GO:2000384,GO:2000736,GO:2001020,GO:2001021,GO:2001233,GO:2001234,GO:2001242,GO:2001243,GO:2001252
EggNOG free text desc.	microtubule binding
EggNOG OGs	KOG1727@1,KOG1727@2759
Ec32 ortholog description	Mss4-like
Ec32 ortholog	Ec-04_006280.1
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko04131
Exons	5
Model size	628
Cds size	627
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig101.744.1	prot_C-linearis_contig101.744.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig101 368133..375911 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927364.6186454-CDS-C-linearis_contig101:368132..368289	1622927364.6186454-CDS-C-linearis_contig101:368132..368289	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 368133..368289 -
1690879654.908685-CDS-C-linearis_contig101:368132..368289	1690879654.908685-CDS-C-linearis_contig101:368132..368289	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 368133..368289 -
1622927364.6292555-CDS-C-linearis_contig101:369537..369632	1622927364.6292555-CDS-C-linearis_contig101:369537..369632	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 369538..369632 -
1690879654.9217997-CDS-C-linearis_contig101:369537..369632	1690879654.9217997-CDS-C-linearis_contig101:369537..369632	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 369538..369632 -
1622927364.6384509-CDS-C-linearis_contig101:369856..369934	1622927364.6384509-CDS-C-linearis_contig101:369856..369934	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 369857..369934 -
1690879654.9311514-CDS-C-linearis_contig101:369856..369934	1690879654.9311514-CDS-C-linearis_contig101:369856..369934	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 369857..369934 -
1622927364.6470933-CDS-C-linearis_contig101:370612..370714	1622927364.6470933-CDS-C-linearis_contig101:370612..370714	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 370613..370714 -
1690879654.9409516-CDS-C-linearis_contig101:370612..370714	1690879654.9409516-CDS-C-linearis_contig101:370612..370714	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 370613..370714 -
1622927364.656584-CDS-C-linearis_contig101:375716..375911	1622927364.656584-CDS-C-linearis_contig101:375716..375911	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 375717..375911 -
1690879654.9551494-CDS-C-linearis_contig101:375716..375911	1690879654.9551494-CDS-C-linearis_contig101:375716..375911	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 375717..375911 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig101:368133..375911-
coding sequence from alignment at C-linearis_contig101:368133..375911-

protein sequence of mRNA_C-linearis_contig101.744.1

>prot_C-linearis_contig101.744.1 ID=prot_C-linearis_contig101.744.1|Name=mRNA_C-linearis_contig101.744.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=209bp
VCVSLVASAPHSSLRPAPSLRHFRPTSTNIMIVYKDLISGDEMMTDAFPQ
NPVVCDGETIEGMFEVESATTIKGSDNVDIGCGNAFGGDEEAVDDSVEKV
NNVIDPFKYTEVPFGSKSELKEYLKDYVRSVRAKLKEKGTPQPEIKEFMA
QAPGMVKFLLGKFADMQTFAGESMTAEGGMAFGYYKEGAHNPTFAYISKA
LDAEKVRV*

mRNA from alignment at C-linearis_contig101:368133..375911-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig101.744.1 ID=mRNA_C-linearis_contig101.744.1|Name=mRNA_C-linearis_contig101.744.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7779bp|location=Sequence derived from alignment at C-linearis_contig101:368133..375911- (Chordaria linearis ClinC8C monoicous)
GTGTGTGTTTCGTTGGTTGCCTCCGCCCCACACAGCAGCCTCCGCCCCGC
ACCCTCCCTTCGCCATTTCCGCCCCACCTCAACAAATATCATGATTGTCT
ACAAAGACTTGATCAGCGGCGATGAGATGATGACGGATGCTTTCCCTCAA
AACCCGGTTGTCTGTGATGGGGAGACGATCGAGGGGATGTTCGAGGTGTG
TACATACGTGTGTGTGCGTGTTTATGTCAGGGCCCATAATTTGTAGCGAT
ATCTCGTATGAAACCATGTGACAGAATCACGATAATCTTGGTATAGCGCC
GGCACTCTTTGCCAGTGGGTGCCCTTGTCGAAGGAACGCGTTGAAATATT
TTCTGGTGAGCTACATCCGATCAACATGTCCATCGAGGCTTGTGACAACC
ACCACCGCGAGTGGGTAGCGCGCGTGACACCAGGAGTGTTTCTCCCTGTT
CCCGCCCTCATGTCTTTCTATGTGGCGGCTTCGGCGTGGCTCGTTTGCCA
CCAAAATGATTGGTGGTCGGTGGGTAACGTTATTTTACCTCGTACGAGCC
GGTCGCCCTGGTGGTCTAAATAGTGGTCTCACCGCAACCATCTAGTATGC
ATGTTCACGGGTTCGAATCCCGGCGCAAGCGACTTCTTAAAGCATAAAAA
AAAAAAACTCCCCTTCAAGAGACAGATCCCCAAGTGGTGGATTAACAGTT
CTATACAGCAGTAGTGACGTAATGTGGGATAGGTGGAGAAGAACAACACC
TACGGCGGCATCCGTGATAAAGACGAATGTATTTCAGTATTTCACGAGTT
TTCCGTAACACACCACGAAACTTGGGTCCTGAGCTCTGAAAATTTGCACA
CACTTTGGTAGGCCACGTGTGTGTGTTTTCGTCCCATTTATTTTGGCGAC
AGTCCCTTTCTGATCAAGGCGAGACGTGTACTACACGTTGCGGTGTATTT
AGAGTACTACACTTGTTCAGTGTATTTTTCTGTACAACCAGAACCAACCG
GGGTCACACAGGAGGGGGTAAACACTGGGGCTTTTTTCTTCTTTTTTTGT
TTCTTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGGATTTTATCG
CCAGAAGGGTGCAGCCATCCCTTTCCCTTGTCAACGTGCTAAGTCGAAGT
TTGGTACTCACGAGCTTTTTCAGCTATGTTATCGCTTTCACCTGCAAAGT
CGCAAAATAATCACCTTCGCTTGGAATTGAACTCCAGACTTTGCTGCTAT
CGAGGTTATACCACTAGTCCACCGGGGCGACCGGCGTGGATCACGAAAAT
ACCATATTTTAAGATTTTTTATTACTGCTGTACTTTTATGATTTTTTATT
ATTTGGTGATCATGGTGATGAGTTAATCGTGAATAGCTCATCACCATGAT
CACCGGGTTAAAACAGCAGGCATGTGAAAAACAGCGGTTCAGCCCTGTAA
CTTACCGGTTATAGCCGAGCCTACAGCCGGTCGCCCCGGTGGACTAGTGG
TTTAACCTCGAACCCACTAGCAGCAAAGTCTGGAGTTCAATTCCAAGCAA
AGGTGATTATTTTGCGACTTTGCAGGTGAAAGCGATAACATAGCTGAAAA
AGCTCGTGAGTACCAAACTTCGACTTAGCACGTTGACGAGGGAAAGGGAT
GGCTGCACCCTTCTCGCGACAAAATCCAAGGCAAGCACCGCAGGAGGAAG
GTGGGGCAAAAACGGAACAGAAAAAGAAGAAAAAAGCCCCAGTGTGTACC
CCCTCCTGTGTGACCGCCATTGGTTCTAGTTGTACAGAAAAATACACTGA
ACAAGTGTAGTACTCTAAATACACCGCAACGTGTAGTACACGTCTCGCCT
TGATCAGAAAGGGACTGTCGCCAAAATAAATGGGACGAAAACACACACAC
ACACACCGGGGACGAAACCCATCCCAGGGGTGTTAAACAACGTAATAGCG
TTCGTTTGAAAAGGCTCTCGAGCTCTCGAGACGTGCTGTATTGCTGTATG
ATATTGCGGTTCTCTGGGTGCTGTCACTGTGCTGTTGCTGTATGTTTATA
TGTTTATCGCGTATGCTCTCTGCCCTGTTAAAATGTTACAATGAATTCTA
ATTTTGGTTGTGATACATGGTACCTCCGGAGACCAAAAATAAAAAATGAA
CATGACTGATGGTTCATGAGTCTTGATCGTGTAGGGCCATTCTTATCGAA
CAAGTTTTTTCACGGATTCGTGAATTCTTGAATTTATTTTCCTCGAATCC
GAGGAAAACAAGGGCGGCGAAAAAAACGCGGCTGTTCAATTCAAGAATCC
GAGGAAACAGAGGAGGGATCGGGCAGACGCGGTAGGAGGGCTGCTCTTAC
GTACAGAAGTGTGCAAAACGTGTCCCAACCCCTCAGAGGATCAGTCACAG
GCCGCTACCGACAAAAATGTCACGAGTCGATGGTTTTGCTGTTGTTGTGG
GATGAGTTGCTCTGTGCCCGCCAAAGCGACCGAAAGTCCAACACGATGAT
CAACTTCACGATATCACCTCTCATAGGGCATGCCAGAGGATAATTCCTTC
TGTCGGAAACAGCTAGCCAATCGTACTATCGGCGAATAGTGTGCAACCTA
TTGCTTGAGTCCTTCGGTCAGGCTAGACGAGAGGGTAGTCGCAATAGCAG
AGGACCAGAGGGGATATGCGATAAGAACGCGGCGGAATTTTTCACGAATC
CGTGATTTTTTTTGCTCGATAAGAACCGCCCTTAGTGTCCTAAGTTGTAG
TAGAAAATAACAAACACTTAAAAGCTTCGAAAAAATGAGTATGAGAAATA
AACACTAGACTATTATTGTGCTACTCTACTGACTCCCCCAACAGATCGCA
GATCGCATGCAAATGCGTGTGGCGAAAAATAAAAACAAAGTAAAACAATA
AAAAAGAAAGAAGGAAAAGAAAGAAAACCTTTTCGACACTTCACGCTTCA
CCGCCCATTACGCAGCTCTCGAAATCTTGCTCCATCAAGCAAAAAATAGT
AAATCTGCCCGCGAATAAGGTCAACATCTAACTCCTGCTGCCTCTGAAAG
CGACGGAACATCGAGGGCCCAAACAAATCAACAAATCTAGTGCTCGACCC
CCTCGAGAATTTCAGGTTCAGCCGAGAGTGCGGGCCCCAGAGACCCCCAA
GAGGCAAATGACATAGTCTGCTGTCGGCTGTGTGTGTCGGTGAATTGGGA
AGAGAGAGAAAAATAAGGGGCCCCGCACTGGCAAAAGGAGGGGGGCGCCA
AAGGGGCCCCGGAAACTGAGAAAATAACCGGGAATTTCCATGTAACTTAC
AGCGAAAGTGAGAACCGGTTAAAACCGGTTAGCGGTTTTTCACATCACTG
CTGTAAAATAGTCGGTAAATCGCCTCGGCGGGCCCCCCAAGGAAAATTCC
AACCCCTCCGAATCGATTGAAAATTTCAGGGATCCTAGGTATGTGTGTGT
GTGTCTTCGTCCCATTTATTTTGGCGACAGTCCCTTTCCGATCAAGGCGA
GACGTGTACTACACGTTGCGGTGTATTTAGAGTACTACACTTGTTCAGTT
TATTTTTCTGTACAACTAGAACCAATGGCGGTCACACAGGAGGGGGGGCT
TTTTTCTTCTTTTTCTGTTCCTTTTTTGCCCCACCTTCCTCCTGCGGTGC
TTGCCTTGGATTTTGTCCCGAGAAGGGTGCAGCCATCCCTTTCCCTCGTC
AACGTGCTAAGTCGAGGTTTGGTACTCACGAGCTTTTTCAGCTATGTTAT
CGCTTTCACCTGCAAAGTCGCAAAATAATCACCGTTGCTTGGAATTGAAC
TCCAGACTTTCCTGCTAGTGGGTTCGAGGTTAAACCACTAGTCCACCGGG
GCGACCGGCATACCACCGGTAAACACGTGTCCGAAGTTAGAAATTGGAAA
AAAGCATTTCTGCGCTACTTCTTTCCCTCAGAAGGAAAGCAAGAAATCGG
AGACAAATTGGGATTATACCAGGATTACACTGAAATATCCCCTCCCGTGG
TACACGTTCCACATGTTGATTCAAGTCCTGCAGACATCACTGATGTGTAA
TTTTGGGTCGGGGGTCACGAATACATCATAAGAATACCCTAGATCGGCAA
TGCAATCGACTTATAAAGGGTGTACAAATGCTTGGCTTTCGTGAGCCTTT
CAAGATTCTCTGAAAAATTTGAAATTTAGATCCTGCCACCAGGTTTGGTC
GGAGCAACTTTCTGAGTGGCTCTACCCCCCCCCCAAAATCGGCCAAGCGG
AGTCGATTGGCGCAGTTCCCTTTCAAAAAAAAGTTCGGCAACATGGTGAA
AAAAAAAGTTCGCGGCGAAGATGAACTTTTATCTTTCAGGGAACTTTTTT
AGACGTCGTTTTTGGTCGTTTTGGAACGATACACGAAGTCGATTTTTCAT
TTATGTTTTCGAGGCAGGAGAGGTCATTTAGCTTTAGCGCGGAACCCGCC
CTAGGATGACTTTTTTTTCACACAAATTGAGTTGTTTCTCTCGCTTTCGT
TTATGTCAGTGGAAAGCGCTTGATTCGTGTGTACACTTGAGGGAGAGACG
GCTGAAACTCTCTCGCGGTAAAAACTACCAGGCAAGCACCGCAGAAGGTG
GGTGGGGGCCTCAGGGAGAGGAGCCTTCTGTGTGATCACGGTTCAGATGT
TCTGGCGAGATGCCCCGCGTGCCAAGACGCCCCTGCGAACTCTGGAAATA
AATGAAAAAGACATAAAAAAATAAAAATAAAAAGTTTTCCTGGCACAGCT
CGGGCTGCATCGATCTCCTTTCTCACCAGAAAGGCAAATCAAAGCTATGA
TAGGGTTGGCACTGCTGATCTGGAGCGGGAACACACCCGCCGGGTAGCAG
GGAGAGCATGGATCAACGCTGTTGTTTTCTAGTTATGGGTGTTCGCTTGT
CGCTGCGTGGGTTCTCGGCTTGAACATGAAAGCTATTCCACCCCAAAGAC
CTGTCACTCATGACGCTCCGCAGGCAGGTCGGCAACAGCCGCGTCTCCAC
TTGTGAGGTGAGCGGCTGTTCAGGCAGCCCGCACGAGAACCAAGTCGCCG
CTTGGACTTCTCGGGCATGACATACCGATCAAGATTGCTGCCAAATGCTG
ATCCATGCCGTACTATTATTCACGCGGTCATGCGCTTCCATCTCAAGTAT
TTTTGACTTCCCTCTCCGTTCTCTCGTCTAATTGAACGCCTCTGTAGGTG
GAGTCTGCCACCACCATCAAGGGTTCCGACAACGTTGATATCGGCTGTGG
AAATGCATTCGGTGGTGACGAGGAGGCCGTCGACGATTCCGTAGAGAAGG
TAGGTGGTTATCTTTGTTCCTAGACTGCATGTGTTGGTTGTGTGCACAGG
TGGGGTATCATGCTCCACATGTTTCAGACAACTTGGGAGAGACATGTTCG
AAAGATCACAAGTTTTGTCAGAGACAGCAGTAGTCGCATCTTCCCTGTTT
TTGTACATCGTACACTGAAGACTCCCCGGGAGTCTACCGGGTGGTTCAGC
TCCCTGTGTTTGTGTGTTTTCGTCCCATTTATTTTGGCGACAGTCCCTTT
CCGATCAAGGCGAGACGTGTTCTACGCTTGTTCAGTGTATTTTTCTGCAC
AACTCGAACCAACCGGGGTCACACCGGAGGGGGTAGACACTATCATAGGG
CTTTTTCTTCTTTTTCTGTTTCTTTTTGTTTTTTGCCCCACCTTCCTCCT
GCGGTGCGTGCCTTAATTTTCCTTAATTTTCGTCGCGAGAAGGGTTGAGC
CGTCCGTTTCCCTCGTCAACGGTAACGTCGAAGTTTTTGGTACTCACGAG
CTTTTAGTTATGTATGTTGTCGCTTTCACCTCGCTAATTTGCAAATTTTT
CACCTCGTGGGGATTCGAACTCACGACTTTGGCTGCTAGCTGGTTTCGAG
GTTACCCCGAAACCACCGGGGCGACCGGACGTGTAGACTCGGTTTATGTT
GACTGTACCGAAATCATGAATTCACAGGTGAACAACGTTATCGACCCTTT
CAAGTACACCGAGGTGCCCTTCGGTAGCAAGAGCGAGCTTAAGGAATACC
TCAAGGTGAGTTGAAGGCTTCCTTTGTTGGAACAGGGTAACACCCACGCA
GGAAAATGCCGTCGTGAGCGACGAAGCATGTTGAGTTGTATGAGTAATTA
ATGGAGCGAAGCATACTACGGAACGAACACGAAGAGAGATCTTGGTTGTG
ATGGCTCTTTGACGTCTACTTGAACCCAAGTATGAGTTCACGTCCGCCCC
TCTCCCGGTCGTGGTGGCCTGGCTGATAGGACTACGTGCGGAGTGTACGT
GCTAAGCTGAAGGAGAAGGGAACGCCGCAGCCAGAGATTAAAGAGTTCAT
GGCACAGGCACCAGGCATGGTCAAGTGAGTTTTCAATGTCACGTGGGTTT
TTTAAAGTCAAGACTATTCCTGCGTCTCCACACAGTAGTGTTGCTGCGTC
ATTCTCGACGAATTCAAGCCTTCGACGTGTGTGCACGCATTTGTTGGCCT
GCCGACAGAGAGCAGAGAGACGCCCATGCGGAACCACCGGCCAATATGTG
TATTTTGAGGGTGTGATCGTATACCTGATACTAGCTGGTACTAGTATACG
CTTTCGGCGCGAAGCGAACTGCTGATCTAGATTGCGACGGATGTTGTCTA
CCGATGGACGAATAGGGCTACTGTTCAGCCTCGCGTAATTTACTTAAAAC
TAGTCTACGACCGCTCCGAAAGAAACAATACGGAACGGTCCTGAAAGCAA
GAAGAGTAATGATAGACACAAAACCTCGGGGGCTCCACAACCACTGCTTG
AGCTCACTAGCACCGCGGTAACGAAGCGGCCCCTTGCAAGGCTGCTCGCT
TAGGTTACTCGATATATGCGTGTCCGTGTGAGCTGACAGTGAAACAACCA
TGGTTTTGGCTGAGAGCGGGCAGCGAAGCAGCAGCAGCGCGACGACACAT
GAAGCATTATTACTCTTATTAAACTTCAAATGTTTGCGGTTTTTTCGGAG
CCAACGGGATCACGGGATGTCGTGTTTGGGCGGCTAAAATGGTGGTTATG
TGTTTTGCCGTTTCATGTCATAAACAGACGCTGCCACCAAAGCACGTGCA
TACGCCGCTATTTTATGAATGTGGGTATTGGGACACGAGACGAGTTTACG
GGTCCAAAGGGCTGTAAAGTCGACTTGTTGTTGTTGTCTTCACACTAAAA
AGCCATCCCGTCTCTCTCTACCCAGTACCCCCTTTTGTCCGTACTGATTC
AACAGACACGGCCAATTCCCGTGGTCACAGGTTAACTTACCCTAAAAAGG
TATCTAAAAATAAAATAGTCCCGAAGGGTCAGCAGAGCGATAAAATTAAA
ACAATTAGTCTGGAGCCCTCCGCTCCCCTCTGCACGCTATGCGAGGTAAA
AGTAAAATTGACTGCAGCAGCGAAATGGTTTTGGTGACCACCTCCGAGGT
GCTCTTTGCGACCCCAAAAGGAAGTCCGTGAAGTTGACCGACGGGCTCAA
TCACCAAAACTCACCCATTGCTGGGATGCTCGGTGGCTCTTCATAACCTT
TATGGTATCACTTATCATATCATCTTGGTTGTAACGCTCCTCGGTCTCGA
ATCATCCTACGTGTCTACTCAGGTTCCTTTTGGGTAAATTTGCCGACATG
CAGACGTTTGCAGGCGAATCGATGACGGCGGAGGGGGGAATGGCGTTCGG
TTACTACAAGGAGGGAGCGCACAACCCGACGTTCGCGTACATCAGCAAGG
CTTTGGATGCGGAGAAGGTGCGCGTGTGA

Coding sequence (CDS) from alignment at C-linearis_contig101:368133..375911-

>mRNA_C-linearis_contig101.744.1 ID=mRNA_C-linearis_contig101.744.1|Name=mRNA_C-linearis_contig101.744.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at C-linearis_contig101:368133..375911- (Chordaria linearis ClinC8C monoicous)
GTGTGTGTTTCGTTGGTTGCCTCCGCCCCACACAGCAGCCTCCGCCCCGC
ACCCTCCCTTCGCCATTTCCGCCCCACCTCAACAAATATCATGATTGTCT
ACAAAGACTTGATCAGCGGCGATGAGATGATGACGGATGCTTTCCCTCAA
AACCCGGTTGTCTGTGATGGGGAGACGATCGAGGGGATGTTCGAGGTGTG
TGTTTCGTTGGTTGCCTCCGCCCCACACAGCAGCCTCCGCCCCGCACCCT
CCCTTCGCCATTTCCGCCCCACCTCAACAAATATCATGATTGTCTACAAA
GACTTGATCAGCGGCGATGAGATGATGACGGATGCTTTCCCTCAAAACCC
GGTTGTCTGTGATGGGGAGACGATCGAGGGGATGTTCGAGGTGGAGTCTG
CCACCACCATCAAGGGTTCCGACAACGTTGATATCGGCTGTGGAAATGCA
TTCGGTGGTGACGAGGAGGCCGTCGACGATTCCGTAGAGAAGGTGGAGTC
TGCCACCACCATCAAGGGTTCCGACAACGTTGATATCGGCTGTGGAAATG
CATTCGGTGGTGACGAGGAGGCCGTCGACGATTCCGTAGAGAAGGTGAAC
AACGTTATCGACCCTTTCAAGTACACCGAGGTGCCCTTCGGTAGCAAGAG
CGAGCTTAAGGAATACCTCAAGGTGAACAACGTTATCGACCCTTTCAAGT
ACACCGAGGTGCCCTTCGGTAGCAAGAGCGAGCTTAAGGAATACCTCAAG
GACTACGTGCGGAGTGTACGTGCTAAGCTGAAGGAGAAGGGAACGCCGCA
GCCAGAGATTAAAGAGTTCATGGCACAGGCACCAGGCATGGTCAAGACTA
CGTGCGGAGTGTACGTGCTAAGCTGAAGGAGAAGGGAACGCCGCAGCCAG
AGATTAAAGAGTTCATGGCACAGGCACCAGGCATGGTCAAGTTCCTTTTG
GGTAAATTTGCCGACATGCAGACGTTTGCAGGCGAATCGATGACGGCGGA
GGGGGGAATGGCGTTCGGTTACTACAAGGAGGGAGCGCACAACCCGACGT
TCGCGTACATCAGCAAGGCTTTGGATGCGGAGAAGGTGCGCGTGTGAGTT
CCTTTTGGGTAAATTTGCCGACATGCAGACGTTTGCAGGCGAATCGATGA
CGGCGGAGGGGGGAATGGCGTTCGGTTACTACAAGGAGGGAGCGCACAAC
CCGACGTTCGCGTACATCAGCAAGGCTTTGGATGCGGAGAAGGTGCGCGT
GTGA