prot_C-linearis_contig101.739.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.739.1
Unique Nameprot_C-linearis_contig101.739.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length254
Homology
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BLAST of mRNA_C-linearis_contig101.739.1 vs. uniprot
Match: D7FJI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI4_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.130e-27
Identity = 75/186 (40.32%), Postives = 97/186 (52.15%), Query Frame = 0 
Query:   71 PTFGSMVQVVAPRWTPPLSPSSKSTSIKHSGFSSGDNENRLL---SPRGALKMLNSPGVPPLDDLRQMRILVGGASRAWLRDFLIRGGRRCVNAKVSEMAVFEKEAKKRPRRVPLIPKVFMRKNSNVXXXXXXXXXXXXXXXXXXXXXXXXXXNRSYGLLPRPTLREIAEAREELLKLVVFLHLRE 253
            P+FG        +WTPPLSP +             D EN  L   +P  A+ +L + G+PPL DL+ +R + G ASR W+RDFLIRGGR CVN KV EMA  E EA+K   ++ L+PKVF                                 +    L PRPT RE++E REEL++LV+FLHLRE
Sbjct:   63 PSFGGF------KWTPPLSPGN-------------DKENAELKPTTPEQAIVLLRTRGLPPLADLKSIRQMAGAASRTWIRDFLIRGGRGCVNEKVREMAQLEMEARKHRPKLALLPKVF--------------------------------GSGKGDLPPRPTPREVSEVREELMQLVLFLHLRE 197
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJI4_ECTSI1.130e-2740.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:273872..283320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.739.1mRNA_C-linearis_contig101.739.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 273662..285910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.739.1 ID=prot_C-linearis_contig101.739.1|Name=mRNA_C-linearis_contig101.739.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=254bp
MELKEENIKAKKRPVSLLRRLSSNISLASWRGEDDTPATKDAAAKKSPLL
LSRADRRSTQHQHQQEPEPRPTFGSMVQVVAPRWTPPLSPSSKSTSIKHS
GFSSGDNENRLLSPRGALKMLNSPGVPPLDDLRQMRILVGGASRAWLRDF
LIRGGRRCVNAKVSEMAVFEKEAKKRPRRVPLIPKVFMRKNSNVNANGNC
NGNGNGNGNGNGDGRGKGKGNRSYGLLPRPTLREIAEAREELLKLVVFLH
LRE*
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