prot_C-linearis_contig101.736.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.736.1
Unique Nameprot_C-linearis_contig101.736.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length684
Homology
BLAST of mRNA_C-linearis_contig101.736.1 vs. uniprot
Match: D7FJI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI0_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.400e-120
Identity = 203/249 (81.53%), Postives = 218/249 (87.55%), Query Frame = 0
Query:  436 MRHLPRTVA--EGKDGAKASFASEGGPFSLASAQEQ-ESSSSQKKALARLSSSQDLFTSMEEARLRDAAAGALARSRKVAKQTWADIGHGGIGNDAGTDESSSFYADPSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQRPGDSATEASLRQQKSEDRSSKVRAHMERVSLSIKTEEVAARLKGERRVRGKARTRLRYNRWVNSMDNWLSDEVPKLADYDKRQFSVQNLRLRGGQQVHEALGGPRAM 681
            MRHLPRT A   GKDGA  SF SEGGPF+ A  QEQ E S S K +LA LSS  DLF+S+EE RL+DA AGALAR+RKVAKQTWADIGHGGIGNDAGTDESSSFYA PSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQR GDSATEAS R QKSEDRS K++ HMER+SLS+KTEEVAARLK ERRVRGKARTRLRY+RWVNSMDNWL DEVPKLADYDKRQF VQ+ R+RGGQQ+HEALGGP A+
Sbjct:    1 MRHLPRTSAMRRGKDGASTSFGSEGGPFAEAPLQEQGEGSLSPKTSLASLSSCHDLFSSLEEGRLQDATAGALARARKVAKQTWADIGHGGIGNDAGTDESSSFYACPSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQRLGDSATEASRRMQKSEDRSIKLKEHMERISLSVKTEEVAARLKEERRVRGKARTRLRYSRWVNSMDNWLGDEVPKLADYDKRQFPVQSSRIRGGQQMHEALGGPMAI 249          
BLAST of mRNA_C-linearis_contig101.736.1 vs. uniprot
Match: D7FJI1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI1_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 6.690e-95
Identity = 182/330 (55.15%), Postives = 213/330 (64.55%), Query Frame = 0
Query:   40 LALAAGEMETERSAASDSYMTSTQMAYISGLHPPPTKVPVMDPYRHRQLLHDRWINRASQRLGDIATLKYGSI---REFFRLYDSNCDGVLDFDEFSEGITMCQLDHLFPRSLQRTLFDKIDTDKSGTIELDEFTRFLGRSEEKAVPPEELSVWQKQEKQRQADDAEAQSVTLQPIQDHRAQRIKNKLSHCLNKAVPNASAGLADNRTMFLKKQFAFLNEEAASRGTSLDDLVRALGPQGMDLGVKDEDLRLLVKEMDTNGDGNVNLKEFAAFINLDDHEPLYQPLFDGRRRN-----SMVEAAPPAESPEEYFFKARADELHSVAVPSK 361
            +A A  E + E S  SDSY+TSTQMAY S                          +  + +  D  TL   S    R FF      C         +   T+C                   + KSG IELDEF  FLG+SE K     + S  QK++ Q+QADD EA+SVTLQPIQDH+AQRIKNKL+HC+ +AVPNAS GLADNRTMFLKKQFAFL+E+AASRG SL++LV+ALGP+GM+LGV DEDLRLLVKEMDTN DGN+ +KEFAAF+NLDDH+PLYQPLFDGRRRN     +MVE APP ESPEE FFKARAD LHSVAVPSK
Sbjct:    1 MAAAVDETQMESSGVSDSYITSTQMAYTS--------------------------DGFNVQARDSVTLPPSSTAASRSFF-----GCT--------TPTATVCST--------------STSSAKSGGIELDEFADFLGQSETKGASSGDPSALQKEKTQQQADDVEARSVTLQPIQDHKAQRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAASRGISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTNCDGNITVKEFAAFLNLDDHDPLYQPLFDGRRRNVNILQAMVEQAPPVESPEEEFFKARADHLHSVAVPSK 277          
BLAST of mRNA_C-linearis_contig101.736.1 vs. uniprot
Match: A0A7R9YBQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ5_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.270e-26
Identity = 73/235 (31.06%), Postives = 130/235 (55.32%), Query Frame = 0
Query:   94 INRASQRLGDIATLKYGSIREFFRLYDSNCDGVLDFDEFSEGITMCQLDHLFPRSLQRTLFDKIDTDKSGTIELDEFTRFLGRSEEKAVPPEELSVWQKQEKQRQADDAEAQSVTLQPIQDHRAQRIKNKLSHCLNKAVP-NASAGLADNRTMFLKKQFAFLNEEAASRGTSLDDLVRALGPQGMDLGVKDEDLRLLVKEMDTNGDGNVNLKEFAAFINLDDHEPLYQPLFDGRR 327
            ++RA  RL  +  LKYGS+R+FF  +D N +G +  +EFS       L+ L PR  QR +F+++D D+SG+++L+EF   L R    + P +           R  ++A  + V L+   + RA+ +++ L   + + +  +  +   + +T +L   F  ++++      S D+   ALGP G+++  K++DLR++ + MD N D  ++  EF  F+N+DD +P Y P +DGRR
Sbjct:  164 LDRAIGRLQQLLVLKYGSVRDFFHTFDENHNGKITLEEFSRTFKRRNLERLIPRREQRLIFERLDADQSGSLDLEEFKSALTRETAFSQPLD-----------RMREEAREKGVKLRRT-NPRAELVRDALLQKVTQRLRMSKESDSVERKTAYLLNIFKQIDKDMTGL-LSADEFAAALGPGGLNVCAKEDDLRMVFEAMDVNEDERISYSEFIDFLNVDDIDPEYNPFYDGRR 385          
BLAST of mRNA_C-linearis_contig101.736.1 vs. uniprot
Match: A0A7S2DS74_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DS74_9STRA)

HSP 1 Score: 102 bits (253), Expect = 9.820e-19
Identity = 73/242 (30.17%), Postives = 122/242 (50.41%), Query Frame = 0
Query:   94 INRASQRLGDIATLKYGSIREFFRLYDSNCDGVLDFDEFSEGITMCQLDHLFPRSLQRTLFDKIDTDKSGTIELDEFTRFL----GRSEE---KAVPPEELSVWQKQEKQRQADDAEAQSVTLQPIQDHRAQRIKNKLSHCLNKAVPNASAGLADNRTMFLKKQFAFLNEEAASRGTSLD--DLVRALGPQGMDLGVKDEDLRLLVKEMDTNGDGNVNLKEFAAFINLDDHEPLYQPLFDGR 326
            I     +L  +A  KYGS+ E FR +D N DG L  +EFS+ ++   L+ LFPR+ QR +F  ID D S ++ LDEF  F+    G + +   K +PP    V             +  S +L   +D     I  +     N  +     G +   T+   + F   +++ +    SLD  +++RALGP+ ++L + D+++  LV+ MD N D +V+ +EF  F+++ D +P Y  +F+ R
Sbjct:  154 IAHVRDKLAALAVEKYGSVTEMFREFDDNKDGELSLEEFSQALSKRHLEKLFPRTDQRIIFKHIDADFSDSVALDEFQGFMDSAVGENYDLFTKTLPPNTEPV-------------KKLSASLTATKDKIVAGIFER-----NNQMKLPDGGDSAKETVI--RAFKHFDKDMSG---SLDRQEIIRALGPEHLNLKISDQEVLNLVEAMDENSDNSVSYREFTEFLDIHDIDPAYNLMFESR 372          
BLAST of mRNA_C-linearis_contig101.736.1 vs. uniprot
Match: A0A7S3ZVU3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVU3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 5.190e-18
Identity = 126/474 (26.58%), Postives = 192/474 (40.51%), Query Frame = 0
Query:   90 HDRWINRASQRLGDIATLKYGSIREFFRLYDSNCDGVLDFDEFSEGITMCQLDHLFPRSLQRTLFDKIDTDKSGTIELDEFTRFLGRSEEKAVPPEELSVWQKQEKQ-RQADDAEAQSVTLQPIQDHRAQRIKNKLSHCLNKAVPNASAGLADNRTMFLKKQFAFLNEEAASRGT-SLDDLVRALGPQGMDLGVKDEDLRLLVKEMDTNGDGNVNLKEFAAFINLDDHEPLYQPLFDGRRRNSM----VEAAP-PAESPEEYFFKARADELHSVAVPSKILDTEVRMERDRIAQEVKAKLSRGRFARPRSPAWTVGEDVVTVSTPSGRTVVDIWDLPLPTRHLSSVKRSLTSSMRHLPRTVAEGKDGAKASFASEGGPFSLASAQEQESSSSQKKALARLSSSQDLFTSMEEARLRDAAAGALARSRKVAKQTWADIGHGGIGNDAGTDESSSFYADPSERFTTTNSERYAPLI 556
            ++R  N+A +RL  +A  KYG +R+ F   D N D  L  DEFS  +    L+ LFPR  QR ++D ID D S ++E++E   +L +       P   +  +  EK  R  +D     +TL P       RI +++ +   +A       L  +  +    Q   +   +   GT S  ++V ALGP+ ++LGV D ++R LV  +D        +K+F   + + DH P + P FD R R  +      AAP   E+ +E   K++  + +S +   K   T              A  + GR  R      T+G +V            D +  PL T       RSL      + R  AE                         S++  K+AL     S+ +F  M   R +  A G   R        W   G GG G        S  Y DP++RF TT +  Y P+I
Sbjct:  170 NERVTNKARERLAQLALHKYGGVRQMFDCLDRNNDKELSLDEFSHALKRRNLEKLFPRDQQRLVYDAIDKDFSESVEVEEMVDWLEKD------PRAAAARRANEKLLRSQEDRNIGEITLPPHLREVKDRIADEV-YKRTRATKTEEGNLRQDEYLINGLQNWDVQNRSKGDGTLSPREIVDALGPKYLNLGVPDAEVRELVDYLDLGE--QCKIKQFVKKLEIGDHAPDFNPFFDARDRELVSLKRTIAAPWQWEATDELLAKSKELQGYSTSPIKKRAQT--------------ASPTYGRRRR------TLGPEV------------DRYVRPLCT------SRSLERHHEIMSRDRAE------------------------HSTAVAKEALTPCDDSEGVFDDMRRTRTQQMA-GICPRFVPQEPTDWTRTGLGGDG----MSPKSGVYLDPTQRFGTTTNRYYTPII 567          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJI0_ECTSI1.400e-12081.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJI1_ECTSI6.690e-9555.15EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7R9YBQ5_9STRA1.270e-2631.06Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2DS74_9STRA9.820e-1930.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZVU3_9STRA5.190e-1826.58Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 285..313
e-value: 0.9
score: 18.1
coord: 111..139
e-value: 4.1E-4
score: 29.7
coord: 149..177
e-value: 0.85
score: 18.3
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 266..309
e-value: 1.0E-6
score: 28.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 112..173
e-value: 4.9E-8
score: 33.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 281..316
score: 11.529
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 107..142
score: 12.421
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 145..180
score: 10.999
NoneNo IPR availableGENE3D1.10.238.10coord: 80..181
e-value: 2.3E-13
score: 52.6
NoneNo IPR availableGENE3D1.10.238.10coord: 263..330
e-value: 4.0E-7
score: 31.6
NoneNo IPR availablePANTHERPTHR10891:SF814CALCIUM-BINDING PROTEIN CML27-RELATEDcoord: 263..314
coord: 111..179
IPR039647EF-hand domain pair protein CML-likePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 111..179
IPR039647EF-hand domain pair protein CML-likePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 263..314
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 294..306
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 158..170
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 120..132
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 112..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:243709..252296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.736.1mRNA_C-linearis_contig101.736.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 243430..252323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.736.1 ID=prot_C-linearis_contig101.736.1|Name=mRNA_C-linearis_contig101.736.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=684bp
MPSVGTSTYSQRLDSISRSGWEKENRRKSTGGIEYSPDNLALAAGEMETE
RSAASDSYMTSTQMAYISGLHPPPTKVPVMDPYRHRQLLHDRWINRASQR
LGDIATLKYGSIREFFRLYDSNCDGVLDFDEFSEGITMCQLDHLFPRSLQ
RTLFDKIDTDKSGTIELDEFTRFLGRSEEKAVPPEELSVWQKQEKQRQAD
DAEAQSVTLQPIQDHRAQRIKNKLSHCLNKAVPNASAGLADNRTMFLKKQ
FAFLNEEAASRGTSLDDLVRALGPQGMDLGVKDEDLRLLVKEMDTNGDGN
VNLKEFAAFINLDDHEPLYQPLFDGRRRNSMVEAAPPAESPEEYFFKARA
DELHSVAVPSKILDTEVRMERDRIAQEVKAKLSRGRFARPRSPAWTVGED
VVTVSTPSGRTVVDIWDLPLPTRHLSSVKRSLTSSMRHLPRTVAEGKDGA
KASFASEGGPFSLASAQEQESSSSQKKALARLSSSQDLFTSMEEARLRDA
AAGALARSRKVAKQTWADIGHGGIGNDAGTDESSSFYADPSERFTTTNSE
RYAPLIKMKKIEKGQRSAGFCRQRPGDSATEASLRQQKSEDRSSKVRAHM
ERVSLSIKTEEVAARLKGERRVRGKARTRLRYNRWVNSMDNWLSDEVPKL
ADYDKRQFSVQNLRLRGGQQVHEALGGPRAMAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR039647EF_hand_pair_protein_CML-like
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair