prot_C-linearis_contig101.735.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.735.1
Unique Nameprot_C-linearis_contig101.735.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length755
Homology
BLAST of mRNA_C-linearis_contig101.735.1 vs. uniprot
Match: D8LE12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE12_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.440e-102
Identity = 322/691 (46.60%), Postives = 359/691 (51.95%), Query Frame = 0
Query:    1 MQPPSKHIELLRTIYSTLRRREPNGCDEKELVGRVFHASASASAERGVTGRGVDRGGGAHGGGXXXXXXXAXAVGEVGDASESHPFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMTPADWKSLLEADHSGARPLPAPSPTHRSEVSMETTLSRLATFKYALQSPLPGEKQFVCRPSPEHALWHGGQLVQLQPVQPXXXXXXXXXXXXXXXXLGPLQYIRQQPXXXXXXXXXXXXXXXXXXSSAAIGSAWGQ--AGTA--VAQRVQGVVPPPRGS-GLGLPAPAPLIRGQEQDQV-----------MVSALTGG---FRMALSPQGS-LDGSTFLGGHGWASPVRYGFDGDGFAQRPQQQQ-----------FSVHAALQ----HQGYGXXXXXXXXXX---GQVSYPHNHGLESFSGGSPRDGGGDQAGMSWAPGVINQGHHGGGGXXXXXXGIGVSRKMMEAAGRSAELLLLQQNRQYLGPNDTP-----TLFSWASYEPNPADNNESA--------------GGGRA----APASPGVMHAPVPMLRELRRQSSLPPLSGAQPMPM----PARMAQTPPFTFTLSSGRDFLSGGE-GGVPRVSDXXXXXXXXXXXXXXXXXA--AEAWERERSRFSVRGRRSPPRESRIAAIAFGA 623
            MQPP+KH ELLRTIY TLRRREPNGCDEKELVGRVFH+S SAS ER   G G D   G   G       X X     GDA ESH FSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMT  DWKSLLE + +                  E     L++      SP   E+QF  R S EHALWHGGQL+QLQP  P   XXXXXXXXXXXXX              XXXXXXXXXXXXXXX    +G  WGQ  AG      + +QGV PP  G      P+P  + +GQEQ  +           MVSA  GG   + M L  +GS LDG    GG G  SP+ YG  G+G    P                + HAA+     HQ YG             GQV +  +H                 AG+SWAPG++ QG HG         G                           G  + P     +L    S E  PA  + SA              GGG A    AP++ G+M APVP+  ELRRQSSLPPL G+ P P       RMA TPP   +   G     GGE G  PR +        XXXXXXXXXX   AEAWERERSRF VRG R  P ESRIAA+A  A
Sbjct:    1 MQPPAKHNELLRTIYGTLRRREPNGCDEKELVGRVFHSSMSASVER--RGGGGDANAGTPAG---VSVAXXXXXXNTGDAPESHRFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMTAMDWKSLLETEQNSGGXXXXXXXXXXXTDQSEHGCRSLSSSPTVQSSPQDNEQQFAPRASSEHALWHGGQLLQLQPTHPRPPXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXVGGVWGQQVAGPQGLPPRGLQGVGPPQAGLVSPAAPSPTAMKQGQEQTLLSRPLPXXXXXAMVSAQVGGVGGYGMVLPLRGSPLDGFPSGGGRGSCSPLGYGLGGNGGNLTPXXXXXXXXXXLHLPVLAPHAAVAAVQPHQVYGFGHVQQGTVAVGGGQVHHRSSH-----------------AGLSWAPGLVGQGPHG---------GXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTEPPPPLPSSLGQRESGEQVPAGTSSSAQSLPGDVSGPAGGVGGGGASFSGAPSAGGMMQAPVPVALELRRQSSLPPLLGSSPRPAFTGAGTRMAHTPPAITSGRLGFPPSGGGEKGSDPRATSDATGADAXXXXXXXXXXXXXAEAWERERSRFGVRGNRPSPVESRIAAVAIAA 656          
BLAST of mRNA_C-linearis_contig101.735.1 vs. uniprot
Match: A0A6H5L5K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K1_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 8.650e-102
Identity = 335/716 (46.79%), Postives = 379/716 (52.93%), Query Frame = 0
Query:    1 MQPPSKHIELLRTIYSTLRRREPNGCDEKELVGRVFHASASASAERGVTGRGVDRGGGAHGGGXXXXXXXAXAVGEVGDASESHPFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMA--------------------RELGVDMTPADWKSLLEADHS----GARPLPAPSPTHRSEVSMETTLSR-------LATFKYALQSPLPGEKQFVCRPSPEHALWHGGQLVQLQPVQPXXXXXXXXXXXXXXXXLGPLQYIRQQPXXXXXXXXXXXXXXXXXXSSAAIGSAWGQAGTAVA----QRVQGVVPPPRGS-GLGLPAPAPLIRGQEQDQV-----------MVSALTGG---FRMALSPQGSLDGSTFLGG--HGWASPVRYGFDGDGFAQRPQQQQ----------------FSVHAALQ----HQGYGXXXXXXXXXX---GQVSYPHNHGLESFSGGSPRDGGGDQAGMSWAPGVINQGHHGGGGXXXXXXGIGVSRKMMEAAGRSAELLLLQQNR-QYLGPNDTPTLF---SWASYEPNPADNNE---SAGGGRA----APASPGVMHAPVPMLRELRRQSSLPPLSGAQPMPM----PARMAQTPPFTFTLSSGRDFLSGGE-GGVPRVSDXXXXXXXXXXXXXXXXX--AAEAWERERSRFSVRGRRSPPRESRIAAIAFGA 623
            MQPP+KH ELLRTIYSTLRRREPNGCDEKELV RVFHAS SASAER   GRG D   G   G            G  GDA ESH FSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMA                    RELGVDMT  DWKSLLE + S    G RP+P+ SPT +SE + ++   +       L++      SP   E QF  R S EHALWHGGQL+QLQP  P       XXXXXXXXX             XXXXXXXXXXXXXXXX    +G  WGQ          + +QGV PP  G      P+P  + +GQEQ  +           MVSA  GG   + M L   GS   + FLGG   G  SP+ YG  G+G    P                     + HAA+     HQ YG             GQV +P +H                 AG+SWAPG++ QG HGG  XXXXXX                 +          LG  ++   F   + +S +  P D N      GGGRA    AP++ G+M APVP+  E RRQSSLPPLSG+   P      ARMA TP    +   G     GGE G  PR +      XXXXXXXXXXXX  AAEAWERERSRF VRG R  P ESRIAA+A  A
Sbjct:  260 MQPPAKHNELLRTIYSTLRRREPNGCDEKELVSRVFHASMSASAER--RGRGGDVNAGTPAG---VSVAGGGGEGTTGDAPESHRFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMAQGLAFTLSTRAHALGRDVSARELGVDMTAMDWKSLLETEQSSGGGGGRPIPSTSPTDQSEGTPQSPAGQNGHGCRSLSSSPTVQSSPRDNELQFAPRASSEHALWHGGQLLQLQPTHPRPTQQHQXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXVGGVWGQQAAGPQGLPLRGLQGVGPPQAGLVSPAAPSPTAMKQGQEQTLLSMPLSPPPPPAMVSAQVGGVGGYGMVLPLHGS-PLNRFLGGGSQGPCSPLGYGLGGNGGNLTPSXXXXXXXXXXXXXXLHLPVLAPHAAVAAVQPHQVYGFGHVQQGTAVVCGGQVHHPSSH-----------------AGLSWAPGLVGQGPHGGXXXXXXXXXXXXXXXXXXXXXXXEGVTEPPPPLPSALGQRESGEQFPVGTSSSAQSLPGDVNGPTGGVGGGRASFSGAPSAGGMMQAPVPVALEARRQSSLPPLSGSSLQPAFTISGARMAHTPSAIASRRLGFPPSGGGEKGSDPRAASGATGSXXXXXXXXXXXXXXAAEAWERERSRFGVRGNRPSPVESRIAAVAIAA 949          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE12_ECTSI1.440e-10246.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5K1_9PHAE8.650e-10246.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:223895..228135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.735.1mRNA_C-linearis_contig101.735.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 223895..228135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.735.1 ID=prot_C-linearis_contig101.735.1|Name=mRNA_C-linearis_contig101.735.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=755bp
MQPPSKHIELLRTIYSTLRRREPNGCDEKELVGRVFHASASASAERGVTG
RGVDRGGGAHGGGSGGGGGVAGAVGEVGDASESHPFSKTKVRGAVTLLKF
AQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMTP
ADWKSLLEADHSGARPLPAPSPTHRSEVSMETTLSRLATFKYALQSPLPG
EKQFVCRPSPEHALWHGGQLVQLQPVQPPPPVQPQGQQQQQQQLLGPLQY
IRQQPSPSPPPPQQQQSVLSQPPSSAAIGSAWGQAGTAVAQRVQGVVPPP
RGSGLGLPAPAPLIRGQEQDQVMVSALTGGFRMALSPQGSLDGSTFLGGH
GWASPVRYGFDGDGFAQRPQQQQFSVHAALQHQGYGGGGGGGHHGGGQVS
YPHNHGLESFSGGSPRDGGGDQAGMSWAPGVINQGHHGGGGDGGGDGGIG
VSRKMMEAAGRSAELLLLQQNRQYLGPNDTPTLFSWASYEPNPADNNESA
GGGRAAPASPGVMHAPVPMLRELRRQSSLPPLSGAQPMPMPARMAQTPPF
TFTLSSGRDFLSGGEGGVPRVSDDDSAVAAAAAAAAAGGGAAEAWERERS
RFSVRGRRSPPRESRIAAIAFGARTTSAADTASGNAEQSRSVSSVTAAGP
DGGDAASSAPASTASAGNTNTSTNTNTNPAEGSAPAKSEPMGYSFESGEQ
HDDVRDGGGGGRGGLVTAGDVSLGELSLGERPLEVGGDKEALAGLSEFVS
SGHR*
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