mRNA_C-linearis_contig101.735.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig101.735.1
Unique Name	mRNA_C-linearis_contig101.735.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig101.735.1 vs. uniprot
Match: D8LE12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE12_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.440e-102
Identity = 322/691 (46.60%), Postives = 359/691 (51.95%), Query Frame = 1

Query:    1 MQPPSKHIELLRTIYSTLRRREPNGCDEKELVGRVFHASASASAERGVTGRGVDRGGGAHGGGXXXXXXXAXAVGEVGDASESHPFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMTPADWKSLLEADHSGARPLPAPSPTHRSEVSMETTLSRLATFKYALQSPLPGEKQFVCRPSPEHALWHGGQLVQLQPVQPXXXXXXXXXXXXXXXXLGPLQYIRQQPXXXXXXXXXXXXXXXXXXSSAAIGSAWGQ--AGTA--VAQRVQGVVPPPRGS-GLGLPAPAPLIRGQEQDQV-----------MVSALTGG---FRMALSPQGS-LDGSTFLGGHGWASPVRYGFDGDGFAQRPQQQQ-----------FSVHAALQ----HQGYGXXXXXXXXXX---GQVSYPHNHGLESFSGGSPRDGGGDQAGMSWAPGVINQGHHGGGGXXXXXXGIGVSRKMMEAAGRSAELLLLQQNRQYLGPNDTP-----TLFSWASYEPNPADNNESA--------------GGGRA----APASPGVMHAPVPMLRELRRQSSLPPLSGAQPMPM----PARMAQTPPFTFTLSSGRDFLSGGE-GGVPRVSDXXXXXXXXXXXXXXXXXA--AEAWERERSRFSVRGRRSPPRESRIAAIAFGA 1869
            MQPP+KH ELLRTIY TLRRREPNGCDEKELVGRVFH+S SAS ER   G G D   G   G       X X     GDA ESH FSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMT  DWKSLLE + +                  E     L++      SP   E+QF  R S EHALWHGGQL+QLQP  P   XXXXXXXXXXXXX              XXXXXXXXXXXXXXX    +G  WGQ  AG      + +QGV PP  G      P+P  + +GQEQ  +           MVSA  GG   + M L  +GS LDG    GG G  SP+ YG  G+G    P                + HAA+     HQ YG             GQV +  +H                 AG+SWAPG++ QG HG         G                           G  + P     +L    S E  PA  + SA              GGG A    AP++ G+M APVP+  ELRRQSSLPPL G+ P P       RMA TPP   +   G     GGE G  PR +        XXXXXXXXXX   AEAWERERSRF VRG R  P ESRIAA+A  A
Sbjct:    1 MQPPAKHNELLRTIYGTLRRREPNGCDEKELVGRVFHSSMSASVER--RGGGGDANAGTPAG---VSVAXXXXXXNTGDAPESHRFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMTAMDWKSLLETEQNSGGXXXXXXXXXXXTDQSEHGCRSLSSSPTVQSSPQDNEQQFAPRASSEHALWHGGQLLQLQPTHPRPPXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXVGGVWGQQVAGPQGLPPRGLQGVGPPQAGLVSPAAPSPTAMKQGQEQTLLSRPLPXXXXXAMVSAQVGGVGGYGMVLPLRGSPLDGFPSGGGRGSCSPLGYGLGGNGGNLTPXXXXXXXXXXLHLPVLAPHAAVAAVQPHQVYGFGHVQQGTVAVGGGQVHHRSSH-----------------AGLSWAPGLVGQGPHG---------GXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTEPPPPLPSSLGQRESGEQVPAGTSSSAQSLPGDVSGPAGGVGGGGASFSGAPSAGGMMQAPVPVALELRRQSSLPPLLGSSPRPAFTGAGTRMAHTPPAITSGRLGFPPSGGGEKGSDPRATSDATGADAXXXXXXXXXXXXXAEAWERERSRFGVRGNRPSPVESRIAAVAIAA 656

[Close]

BLAST of mRNA_C-linearis_contig101.735.1 vs. uniprot
Match: A0A6H5L5K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K1_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 8.650e-102
Identity = 335/716 (46.79%), Postives = 379/716 (52.93%), Query Frame = 1

Query:    1 MQPPSKHIELLRTIYSTLRRREPNGCDEKELVGRVFHASASASAERGVTGRGVDRGGGAHGGGXXXXXXXAXAVGEVGDASESHPFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMA--------------------RELGVDMTPADWKSLLEADHS----GARPLPAPSPTHRSEVSMETTLSR-------LATFKYALQSPLPGEKQFVCRPSPEHALWHGGQLVQLQPVQPXXXXXXXXXXXXXXXXLGPLQYIRQQPXXXXXXXXXXXXXXXXXXSSAAIGSAWGQAGTAVA----QRVQGVVPPPRGS-GLGLPAPAPLIRGQEQDQV-----------MVSALTGG---FRMALSPQGSLDGSTFLGG--HGWASPVRYGFDGDGFAQRPQQQQ----------------FSVHAALQ----HQGYGXXXXXXXXXX---GQVSYPHNHGLESFSGGSPRDGGGDQAGMSWAPGVINQGHHGGGGXXXXXXGIGVSRKMMEAAGRSAELLLLQQNR-QYLGPNDTPTLF---SWASYEPNPADNNE---SAGGGRA----APASPGVMHAPVPMLRELRRQSSLPPLSGAQPMPM----PARMAQTPPFTFTLSSGRDFLSGGE-GGVPRVSDXXXXXXXXXXXXXXXXX--AAEAWERERSRFSVRGRRSPPRESRIAAIAFGA 1869
            MQPP+KH ELLRTIYSTLRRREPNGCDEKELV RVFHAS SASAER   GRG D   G   G            G  GDA ESH FSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMA                    RELGVDMT  DWKSLLE + S    G RP+P+ SPT +SE + ++   +       L++      SP   E QF  R S EHALWHGGQL+QLQP  P       XXXXXXXXX             XXXXXXXXXXXXXXXX    +G  WGQ          + +QGV PP  G      P+P  + +GQEQ  +           MVSA  GG   + M L   GS   + FLGG   G  SP+ YG  G+G    P                     + HAA+     HQ YG             GQV +P +H                 AG+SWAPG++ QG HGG  XXXXXX                 +          LG  ++   F   + +S +  P D N      GGGRA    AP++ G+M APVP+  E RRQSSLPPLSG+   P      ARMA TP    +   G     GGE G  PR +      XXXXXXXXXXXX  AAEAWERERSRF VRG R  P ESRIAA+A  A
Sbjct:  260 MQPPAKHNELLRTIYSTLRRREPNGCDEKELVSRVFHASMSASAER--RGRGGDVNAGTPAG---VSVAGGGGEGTTGDAPESHRFSKTKVRGAVTLLKFAQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMAQGLAFTLSTRAHALGRDVSARELGVDMTAMDWKSLLETEQSSGGGGGRPIPSTSPTDQSEGTPQSPAGQNGHGCRSLSSSPTVQSSPRDNELQFAPRASSEHALWHGGQLLQLQPTHPRPTQQHQXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXVGGVWGQQAAGPQGLPLRGLQGVGPPQAGLVSPAAPSPTAMKQGQEQTLLSMPLSPPPPPAMVSAQVGGVGGYGMVLPLHGS-PLNRFLGGGSQGPCSPLGYGLGGNGGNLTPSXXXXXXXXXXXXXXLHLPVLAPHAAVAAVQPHQVYGFGHVQQGTAVVCGGQVHHPSSH-----------------AGLSWAPGLVGQGPHGGXXXXXXXXXXXXXXXXXXXXXXXEGVTEPPPPLPSALGQRESGEQFPVGTSSSAQSLPGDVNGPTGGVGGGRASFSGAPSAGGMMQAPVPVALEARRQSSLPPLSGSSLQPAFTISGARMAHTPSAIASRRLGFPPSGGGEKGSDPRAASGATGSXXXXXXXXXXXXXXAAEAWERERSRFGVRGNRPSPVESRIAAVAIAA 949

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig101.735.1 vs. uniprot

BLAST of mRNA_C-linearis_contig101.735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LE12_ECTSI	1.440e-102	46.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L5K1_9PHAE	8.650e-102	46.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig101	contig	C-linearis_contig101:223895..228135 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-05_004460.1
Exons	5
Model size	2265
Cds size	2265
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig101.735.1	prot_C-linearis_contig101.735.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig101 223895..228135 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927362.8575437-CDS-C-linearis_contig101:223894..223929	1622927362.8575437-CDS-C-linearis_contig101:223894..223929	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 223895..223929 +
1690879653.7712858-CDS-C-linearis_contig101:223894..223929	1690879653.7712858-CDS-C-linearis_contig101:223894..223929	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 223895..223929 +
1622927362.8669465-CDS-C-linearis_contig101:224278..224549	1622927362.8669465-CDS-C-linearis_contig101:224278..224549	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 224279..224549 +
1690879653.7810247-CDS-C-linearis_contig101:224278..224549	1690879653.7810247-CDS-C-linearis_contig101:224278..224549	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 224279..224549 +
1622927362.8756793-CDS-C-linearis_contig101:224857..224972	1622927362.8756793-CDS-C-linearis_contig101:224857..224972	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 224858..224972 +
1690879653.7891734-CDS-C-linearis_contig101:224857..224972	1690879653.7891734-CDS-C-linearis_contig101:224857..224972	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 224858..224972 +
1622927362.884613-CDS-C-linearis_contig101:225399..225563	1622927362.884613-CDS-C-linearis_contig101:225399..225563	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 225400..225563 +
1690879653.8001616-CDS-C-linearis_contig101:225399..225563	1690879653.8001616-CDS-C-linearis_contig101:225399..225563	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 225400..225563 +
1622927362.8940778-CDS-C-linearis_contig101:226455..228135	1622927362.8940778-CDS-C-linearis_contig101:226455..228135	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 226456..228135 +
1690879653.8080335-CDS-C-linearis_contig101:226455..228135	1690879653.8080335-CDS-C-linearis_contig101:226455..228135	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 226456..228135 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig101:223895..228135+
coding sequence from alignment at C-linearis_contig101:223895..228135+

protein sequence of mRNA_C-linearis_contig101.735.1

>prot_C-linearis_contig101.735.1 ID=prot_C-linearis_contig101.735.1|Name=mRNA_C-linearis_contig101.735.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=755bp
MQPPSKHIELLRTIYSTLRRREPNGCDEKELVGRVFHASASASAERGVTG
RGVDRGGGAHGGGSGGGGGVAGAVGEVGDASESHPFSKTKVRGAVTLLKF
AQAVRVGRGDTAGQHVLYVAYELPTFSDFMARHNSHLVDMARELGVDMTP
ADWKSLLEADHSGARPLPAPSPTHRSEVSMETTLSRLATFKYALQSPLPG
EKQFVCRPSPEHALWHGGQLVQLQPVQPPPPVQPQGQQQQQQQLLGPLQY
IRQQPSPSPPPPQQQQSVLSQPPSSAAIGSAWGQAGTAVAQRVQGVVPPP
RGSGLGLPAPAPLIRGQEQDQVMVSALTGGFRMALSPQGSLDGSTFLGGH
GWASPVRYGFDGDGFAQRPQQQQFSVHAALQHQGYGGGGGGGHHGGGQVS
YPHNHGLESFSGGSPRDGGGDQAGMSWAPGVINQGHHGGGGDGGGDGGIG
VSRKMMEAAGRSAELLLLQQNRQYLGPNDTPTLFSWASYEPNPADNNESA
GGGRAAPASPGVMHAPVPMLRELRRQSSLPPLSGAQPMPMPARMAQTPPF
TFTLSSGRDFLSGGEGGVPRVSDDDSAVAAAAAAAAAGGGAAEAWERERS
RFSVRGRRSPPRESRIAAIAFGARTTSAADTASGNAEQSRSVSSVTAAGP
DGGDAASSAPASTASAGNTNTSTNTNTNPAEGSAPAKSEPMGYSFESGEQ
HDDVRDGGGGGRGGLVTAGDVSLGELSLGERPLEVGGDKEALAGLSEFVS
SGHR*

mRNA from alignment at C-linearis_contig101:223895..228135+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig101.735.1 ID=mRNA_C-linearis_contig101.735.1|Name=mRNA_C-linearis_contig101.735.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4241bp|location=Sequence derived from alignment at C-linearis_contig101:223895..228135+ (Chordaria linearis ClinC8C monoicous)
ATGCAGCCTCCTTCCAAGCACATCGAACTCCTACGGTGAGGAAGAAGCAG
GAGACAAGGGACGAGATGGAAGACAAAAGAGCAAGGGGGTCGGTTTGATC
AGAGCAGGACACAGGCGCTTATGCGAAGAGCTCTTCCATATCTTGTGTGT
CTTGTGGTAGTATATACGGGTGGACGAAGCGCAGGGTCGATTTTTGAAAG
AAAATTTATGAGAACGCTTGCAAGACTGGCTGCTGTGCTCCCAGACACTC
CTCTCTCGAACCCCTTGCCGATCCAGCCCCCCCCTCCCCCCGCCCTCCTC
CGATCCCCTCCCTATGTGCCGTCCTTTCCATCCGCTTCGTCGGTGCCCCC
GAACCCAAACAATCACCTCGCAACGTGGCAACAGCACGATATACAGCACC
CTCCGCCGGCGCGAGCCGAACGGATGCGACGAGAAAGAGCTGGTAGGTAG
GGTTTTCCACGCGTCCGCCTCCGCTTCCGCCGAAAGGGGCGTCACCGGCA
GGGGCGTTGATAGAGGGGGGGGCGCCCACGGGGGTGGCTCGGGCGGCGGC
GGCGGCGTAGCTGGAGCCGTGGGCGAGGTGGGCGATGCGTCGGAGAGCCA
CCCGTTCTCCAAGACTAAGGTCCGCGGCGCGGTGACGCTCCTCAAGTTCG
CACAGGTGCGCGTGCATGCGTCGTCGTCGTCGTCCTTGTTGTTGTTTTTG
TTGTTGTTGTTCTTCTTCTTCTTCTCCTTAAGATTTTGTTCGTTCTGATT
CGTGAATATGGAACCAACATCAGATCCAGCGTCCGTTGCGGTTGGTTTTC
GTCCTTGTATACCTCGGATCTGCTGCACGCGCGCGTTTCCTGAGCAGGCC
GTCATCGACTGACCTACCAAAAACTCGGTAGTTTCAGTCGCTCAAAGCCT
CGAGGCCGAACCCGTGCTGGTGTTGTGCGTGTTGTGTTTTGTGGGTTGAT
TTTGAACAAAAAGGCGGTGAGGGTCGGTCGGGGCGACACCGCTGGCCAGC
ATGTCCTATACGTGGCGTACGAGCTGCCGACCTTCAGCGACTTCATGGCG
AGGCACAACAGCCACCTCGTCGATATGGGTGAGTGAGAGTTGTGCGAAGC
TGTACAACAAATACGTATGGTACTTCGTAGTCTATCAGCTCTTGGTCGAT
TTGATTGATCCCGATCCCTTGCGTCCTCATCTCCGCTGTAACAATCGATC
AAAACTAGTGCAGGCCTCCCTACCGTGGCCACCCGTGACGTCGCGAGGGC
GTAGCGGGCTCTAGACTAGCCGACTCCGCGTTCTCAGTACCAAGATAGAT
ACAAGTTGTGACGGCCCCAAATCCTCCGATTGTCGACGAGTCTTCTCTTG
TTGACTCGCGTATCGGTCCGGGGTGTTTAACCCGTTGTCGTATCGGGCGG
ATGGTTCATTCAGCGTTTTCTTTTTTTCTTACCTTTGTCCCGTTTCTTCT
GCGATTGCACCTTCCTTCCTTCTTTCCTTGTCCTCCTTTGCGTTGTCGTC
GTCAGCGCGAGAGTTGGGGGTGGACATGACGCCAGCGGACTGGAAGAGCC
TTCTAGAGGCGGACCACTCAGGGGCGCGCCCGCTTCCGGCCCCTAGCCCC
ACTCATCGATCAGAGGTGAGCATGGAAACAACCTTGTCGCGTCTTGCTAC
CTTTAAGTATGCGTTACAGGTTTGTCGCCGATGCCAACTGCAAAGCCAAG
CGCCACGAAAAGTAGCAACCAGTGCAGAACGGTGTTCTTTTTCAAGGCCC
CCGAAACCTGCGCAAGCAAAGCCTCCCCACCTTGGAACGCCGTGAGGTGT
GTGTACCATGCGTCTGTTGCTCTCACAGTTTAGTTTCCTTTGTTTGCTGC
TCGACGCTTTGCTGTCCCTCGCTGACCCGTCCCCTCCACCCCCCCCTCCT
GACTCGAACAGAGCTCCCCCTCGGTCGAAAGTCCATCCGGGACCGAGCCC
CCGCGCTCGATGCGGCTGACGGAGTCGCCCAACGGGGCTCACCGGCGGCC
AACCCCGTCACCGTGCCCCAAACCGCCGTCATCGCAGCAGCAGCAGCAGC
AGCAACAGCAACAGCAGCAGCGCTTCGCGGGCGTCCCTTTGCCGTCTCCG
CCCTCTAGGCAGCGGACCACGCAGCAGTCTCCCCCCCACAACGTGGTGAG
TGGGATAGTGTGGTGTGGTGTAGCATCGTATCGTATCGTATCTTGTTGTT
TCCAGGGCCGGAGGGAAATGTTGTGGGGGGGAGAGAGGGTCCCAGTCTTT
GCTCAGCCTCGGGAGTGTGAAAGGAAGGTGTTGCGCAAAAGACTGACGTC
AGTTTAAGGCATTGTTGATCTAGGAAGGAGATCTTGGATGTATTATCTGT
GAGAAGAGTGGCCCGGTAAAACGTACGAAATGCGAGCCTACTTTTGGCCG
CGCTAGTTTGTTTTCATGTGGAAAAAAAACATGGCCTCACCCTCCCCTCG
TCCCCGCCCCCGGCCTACTCTATTGTCTGGTCCGCGGTATTTACTTCCGA
CACCATCGGCTTTCGATTTCTCTTTATCTGCCGGGGTCTGCCGTCCCCCT
CCTCCGGGCAGTCGCCTCTGCCTGGCGAGAAGCAGTTCGTCTGCCGCCCG
TCCCCGGAGCACGCCCTATGGCACGGCGGCCAGCTCGTGCAGCTGCAACC
CGTGCAACCGCCCCCGCCCGTCCAACCGCAAGGACAGCAGCAGCAGCAGC
AGCAGCTCCTGGGGCCGCTGCAGTACATACGGCAGCAGCCGTCGCCGTCG
CCGCCGCCGCCGCAGCAGCAACAGTCCGTGTTGTCCCAGCCGCCGTCGTC
TGCTGCCATCGGCAGCGCCTGGGGGCAGGCCGGCACCGCCGTTGCGCAGC
GGGTACAAGGTGTCGTTCCTCCTCCGCGGGGAAGCGGCCTCGGTTTGCCG
GCGCCGGCGCCGCTGATTCGAGGGCAGGAGCAGGACCAAGTGATGGTTTC
CGCTTTGACTGGGGGGTTCAGGATGGCCCTATCCCCTCAGGGATCGCTCG
ACGGGTCGACGTTCCTAGGCGGTCACGGGTGGGCTAGTCCCGTCAGGTAC
GGGTTTGATGGAGACGGGTTCGCGCAGCGGCCACAGCAGCAGCAATTTTC
GGTGCATGCTGCGTTGCAGCACCAGGGCTACGGTGGTGGCGGTGGCGGTG
GGCATCACGGTGGCGGACAAGTTAGCTACCCGCACAACCATGGGCTTGAG
TCATTTTCCGGAGGTAGCCCTCGCGACGGCGGTGGCGACCAGGCCGGGAT
GAGCTGGGCGCCGGGAGTAATAAACCAAGGACACCATGGCGGGGGCGGCG
ACGGCGGTGGCGACGGCGGTATCGGCGTTTCGCGAAAGATGATGGAGGCA
GCGGGGCGTTCGGCGGAATTGCTCCTGCTCCAACAGAACCGGCAGTACCT
TGGTCCGAACGACACGCCCACTTTGTTCTCTTGGGCGTCGTACGAGCCGA
ACCCCGCCGACAACAACGAATCAGCCGGCGGCGGTCGCGCTGCTCCTGCC
TCTCCGGGTGTGATGCACGCCCCGGTTCCGATGCTGCGCGAACTCAGGAG
GCAGTCCTCCCTCCCTCCCCTGTCGGGAGCCCAGCCGATGCCGATGCCTG
CGAGGATGGCGCAGACGCCGCCCTTCACCTTCACCCTGTCCAGCGGGCGG
GACTTCCTGAGCGGTGGAGAGGGCGGTGTTCCTCGGGTTTCGGATGATGA
TTCGGCCGTCGCTGCTGCCGCTGCCGCTGCCGCTGCCGGTGGGGGTGCTG
CCGAAGCCTGGGAGCGAGAGAGGTCGCGGTTCAGCGTCAGGGGGCGCAGA
TCGCCTCCTAGGGAGTCGAGGATCGCCGCTATTGCCTTCGGCGCTCGGAC
CACGTCGGCCGCGGATACGGCCTCGGGTAACGCGGAGCAGAGCAGGAGCG
TCTCTTCGGTGACTGCTGCCGGCCCCGACGGCGGTGACGCGGCTTCGTCT
GCTCCCGCTTCAACGGCGTCGGCCGGAAACACGAACACCAGCACCAACAC
CAACACAAACCCGGCCGAGGGATCGGCGCCCGCGAAATCAGAACCCATGG
GGTACTCGTTTGAGTCAGGGGAGCAGCACGATGATGTCAGGGATGGTGGC
GGCGGTGGAAGAGGCGGACTCGTAACCGCGGGAGATGTGTCCCTAGGCGA
GCTGTCTCTGGGCGAGCGGCCCCTGGAGGTGGGAGGTGATAAGGAGGCAC
TGGCGGGACTGAGCGAGTTCGTCTCGAGCGGCCACAGGTAG

Coding sequence (CDS) from alignment at C-linearis_contig101:223895..228135+

>mRNA_C-linearis_contig101.735.1 ID=mRNA_C-linearis_contig101.735.1|Name=mRNA_C-linearis_contig101.735.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4530bp|location=Sequence derived from alignment at C-linearis_contig101:223895..228135+ (Chordaria linearis ClinC8C monoicous)
ATGCAGCCTCCTTCCAAGCACATCGAACTCCTACGATGCAGCCTCCTTCC
AAGCACATCGAACTCCTACGCACGATATACAGCACCCTCCGCCGGCGCGA
GCCGAACGGATGCGACGAGAAAGAGCTGGTAGGTAGGGTTTTCCACGCGT
CCGCCTCCGCTTCCGCCGAAAGGGGCGTCACCGGCAGGGGCGTTGATAGA
GGGGGGGGCGCCCACGGGGGTGGCTCGGGCGGCGGCGGCGGCGTAGCTGG
AGCCGTGGGCGAGGTGGGCGATGCGTCGGAGAGCCACCCGTTCTCCAAGA
CTAAGGTCCGCGGCGCGGTGACGCTCCTCAAGTTCGCACAGCACGATATA
CAGCACCCTCCGCCGGCGCGAGCCGAACGGATGCGACGAGAAAGAGCTGG
TAGGTAGGGTTTTCCACGCGTCCGCCTCCGCTTCCGCCGAAAGGGGCGTC
ACCGGCAGGGGCGTTGATAGAGGGGGGGGCGCCCACGGGGGTGGCTCGGG
CGGCGGCGGCGGCGTAGCTGGAGCCGTGGGCGAGGTGGGCGATGCGTCGG
AGAGCCACCCGTTCTCCAAGACTAAGGTCCGCGGCGCGGTGACGCTCCTC
AAGTTCGCACAGGCGGTGAGGGTCGGTCGGGGCGACACCGCTGGCCAGCA
TGTCCTATACGTGGCGTACGAGCTGCCGACCTTCAGCGACTTCATGGCGA
GGCACAACAGCCACCTCGTCGATATGGGCGGTGAGGGTCGGTCGGGGCGA
CACCGCTGGCCAGCATGTCCTATACGTGGCGTACGAGCTGCCGACCTTCA
GCGACTTCATGGCGAGGCACAACAGCCACCTCGTCGATATGGCGCGAGAG
TTGGGGGTGGACATGACGCCAGCGGACTGGAAGAGCCTTCTAGAGGCGGA
CCACTCAGGGGCGCGCCCGCTTCCGGCCCCTAGCCCCACTCATCGATCAG
AGGTGAGCATGGAAACAACCTTGTCGCGTCTTGCTACCTTTAAGTATGCG
TTACAGCGCGAGAGTTGGGGGTGGACATGACGCCAGCGGACTGGAAGAGC
CTTCTAGAGGCGGACCACTCAGGGGCGCGCCCGCTTCCGGCCCCTAGCCC
CACTCATCGATCAGAGGTGAGCATGGAAACAACCTTGTCGCGTCTTGCTA
CCTTTAAGTATGCGTTACAGTCGCCTCTGCCTGGCGAGAAGCAGTTCGTC
TGCCGCCCGTCCCCGGAGCACGCCCTATGGCACGGCGGCCAGCTCGTGCA
GCTGCAACCCGTGCAACCGCCCCCGCCCGTCCAACCGCAAGGACAGCAGC
AGCAGCAGCAGCAGCTCCTGGGGCCGCTGCAGTACATACGGCAGCAGCCG
TCGCCGTCGCCGCCGCCGCCGCAGCAGCAACAGTCCGTGTTGTCCCAGCC
GCCGTCGTCTGCTGCCATCGGCAGCGCCTGGGGGCAGGCCGGCACCGCCG
TTGCGCAGCGGGTACAAGGTGTCGTTCCTCCTCCGCGGGGAAGCGGCCTC
GGTTTGCCGGCGCCGGCGCCGCTGATTCGAGGGCAGGAGCAGGACCAAGT
GATGGTTTCCGCTTTGACTGGGGGGTTCAGGATGGCCCTATCCCCTCAGG
GATCGCTCGACGGGTCGACGTTCCTAGGCGGTCACGGGTGGGCTAGTCCC
GTCAGGTACGGGTTTGATGGAGACGGGTTCGCGCAGCGGCCACAGCAGCA
GCAATTTTCGGTGCATGCTGCGTTGCAGCACCAGGGCTACGGTGGTGGCG
GTGGCGGTGGGCATCACGGTGGCGGACAAGTTAGCTACCCGCACAACCAT
GGGCTTGAGTCATTTTCCGGAGGTAGCCCTCGCGACGGCGGTGGCGACCA
GGCCGGGATGAGCTGGGCGCCGGGAGTAATAAACCAAGGACACCATGGCG
GGGGCGGCGACGGCGGTGGCGACGGCGGTATCGGCGTTTCGCGAAAGATG
ATGGAGGCAGCGGGGCGTTCGGCGGAATTGCTCCTGCTCCAACAGAACCG
GCAGTACCTTGGTCCGAACGACACGCCCACTTTGTTCTCTTGGGCGTCGT
ACGAGCCGAACCCCGCCGACAACAACGAATCAGCCGGCGGCGGTCGCGCT
GCTCCTGCCTCTCCGGGTGTGATGCACGCCCCGGTTCCGATGCTGCGCGA
ACTCAGGAGGCAGTCCTCCCTCCCTCCCCTGTCGGGAGCCCAGCCGATGC
CGATGCCTGCGAGGATGGCGCAGACGCCGCCCTTCACCTTCACCCTGTCC
AGCGGGCGGGACTTCCTGAGCGGTGGAGAGGGCGGTGTTCCTCGGGTTTC
GGATGATGATTCGGCCGTCGCTGCTGCCGCTGCCGCTGCCGCTGCCGGTG
GGGGTGCTGCCGAAGCCTGGGAGCGAGAGAGGTCGCGGTTCAGCGTCAGG
GGGCGCAGATCGCCTCCTAGGGAGTCGAGGATCGCCGCTATTGCCTTCGG
CGCTCGGACCACGTCGGCCGCGGATACGGCCTCGGGTAACGCGGAGCAGA
GCAGGAGCGTCTCTTCGGTGACTGCTGCCGGCCCCGACGGCGGTGACGCG
GCTTCGTCTGCTCCCGCTTCAACGGCGTCGGCCGGAAACACGAACACCAG
CACCAACACCAACACAAACCCGGCCGAGGGATCGGCGCCCGCGAAATCAG
AACCCATGGGGTACTCGTTTGAGTCAGGGGAGCAGCACGATGATGTCAGG
GATGGTGGCGGCGGTGGAAGAGGCGGACTCGTAACCGCGGGAGATGTGTC
CCTAGGCGAGCTGTCTCTGGGCGAGCGGCCCCTGGAGGTGGGAGGTGATA
AGGAGGCACTGGCGGGACTGAGCGAGTTCGTCTCGAGCGGCCACAGGTAG
TCGCCTCTGCCTGGCGAGAAGCAGTTCGTCTGCCGCCCGTCCCCGGAGCA
CGCCCTATGGCACGGCGGCCAGCTCGTGCAGCTGCAACCCGTGCAACCGC
CCCCGCCCGTCCAACCGCAAGGACAGCAGCAGCAGCAGCAGCAGCTCCTG
GGGCCGCTGCAGTACATACGGCAGCAGCCGTCGCCGTCGCCGCCGCCGCC
GCAGCAGCAACAGTCCGTGTTGTCCCAGCCGCCGTCGTCTGCTGCCATCG
GCAGCGCCTGGGGGCAGGCCGGCACCGCCGTTGCGCAGCGGGTACAAGGT
GTCGTTCCTCCTCCGCGGGGAAGCGGCCTCGGTTTGCCGGCGCCGGCGCC
GCTGATTCGAGGGCAGGAGCAGGACCAAGTGATGGTTTCCGCTTTGACTG
GGGGGTTCAGGATGGCCCTATCCCCTCAGGGATCGCTCGACGGGTCGACG
TTCCTAGGCGGTCACGGGTGGGCTAGTCCCGTCAGGTACGGGTTTGATGG
AGACGGGTTCGCGCAGCGGCCACAGCAGCAGCAATTTTCGGTGCATGCTG
CGTTGCAGCACCAGGGCTACGGTGGTGGCGGTGGCGGTGGGCATCACGGT
GGCGGACAAGTTAGCTACCCGCACAACCATGGGCTTGAGTCATTTTCCGG
AGGTAGCCCTCGCGACGGCGGTGGCGACCAGGCCGGGATGAGCTGGGCGC
CGGGAGTAATAAACCAAGGACACCATGGCGGGGGCGGCGACGGCGGTGGC
GACGGCGGTATCGGCGTTTCGCGAAAGATGATGGAGGCAGCGGGGCGTTC
GGCGGAATTGCTCCTGCTCCAACAGAACCGGCAGTACCTTGGTCCGAACG
ACACGCCCACTTTGTTCTCTTGGGCGTCGTACGAGCCGAACCCCGCCGAC
AACAACGAATCAGCCGGCGGCGGTCGCGCTGCTCCTGCCTCTCCGGGTGT
GATGCACGCCCCGGTTCCGATGCTGCGCGAACTCAGGAGGCAGTCCTCCC
TCCCTCCCCTGTCGGGAGCCCAGCCGATGCCGATGCCTGCGAGGATGGCG
CAGACGCCGCCCTTCACCTTCACCCTGTCCAGCGGGCGGGACTTCCTGAG
CGGTGGAGAGGGCGGTGTTCCTCGGGTTTCGGATGATGATTCGGCCGTCG
CTGCTGCCGCTGCCGCTGCCGCTGCCGGTGGGGGTGCTGCCGAAGCCTGG
GAGCGAGAGAGGTCGCGGTTCAGCGTCAGGGGGCGCAGATCGCCTCCTAG
GGAGTCGAGGATCGCCGCTATTGCCTTCGGCGCTCGGACCACGTCGGCCG
CGGATACGGCCTCGGGTAACGCGGAGCAGAGCAGGAGCGTCTCTTCGGTG
ACTGCTGCCGGCCCCGACGGCGGTGACGCGGCTTCGTCTGCTCCCGCTTC
AACGGCGTCGGCCGGAAACACGAACACCAGCACCAACACCAACACAAACC
CGGCCGAGGGATCGGCGCCCGCGAAATCAGAACCCATGGGGTACTCGTTT
GAGTCAGGGGAGCAGCACGATGATGTCAGGGATGGTGGCGGCGGTGGAAG
AGGCGGACTCGTAACCGCGGGAGATGTGTCCCTAGGCGAGCTGTCTCTGG
GCGAGCGGCCCCTGGAGGTGGGAGGTGATAAGGAGGCACTGGCGGGACTG
AGCGAGTTCGTCTCGAGCGGCCACAGGTAG