mRNA_C-linearis_contig101.730.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig101.730.1
Unique NamemRNA_C-linearis_contig101.730.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 4.000e-105
Identity = 183/269 (68.03%), Postives = 209/269 (77.70%), Query Frame = 1
Query:    4 NNNNKMNTRKIKINFQGTAGDVDLPSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETA-AKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVE---PAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPRE 792
            NN+  M T  IKINFQG + DV++P+P TL  LQ AIA+ F  E+P RS A EAAKD+DLSFTYKDP+GDDIVFDKDSEL LA+RLCPSSLEI+AA KE+  A KPDPE RLY +AARNLREYNGVPSMTP KLIKTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL++SVAAGMELMSVED KKEWNDGFVS E   PA AAP TAE    DN    ++++D+ AP  K+N++HKAFIA GIQLRPRE
Sbjct:   11 NNDKMMTTSSIKINFQGASRDVNVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGK-NNEDLADSVAAGMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDK--EEENDDAAPEVKKNLIHKAFIAGGIQLRPRE 275          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 8.770e-103
Identity = 179/261 (68.58%), Postives = 202/261 (77.39%), Query Frame = 1
Query:   19 MNTRKIKINFQGTAGDVDLPSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETA-AKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPRE 792
            M T  IKINFQGT+ DV++P P TLA LQ AIA  F  E+P RS A EAAKD+DLSFTYKDP+GDDIVFDKDSEL+LA+RLCP SLEI+AA KE   A KPDPE RLY +AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL+ESVAAGMELMSVEDDKKEWNDGFVSVEPA  +        +DN    ++K+D  AP  K+N++HKAFIA GIQLRPRE
Sbjct:    1 MTTSSIKINFQGTSRDVNVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGK-NNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEPADTSSPG-----NDN----EEKNDAVAPEVKKNLIHKAFIAGGIQLRPRE 251          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 2.140e-102
Identity = 178/266 (66.92%), Postives = 205/266 (77.07%), Query Frame = 1
Query:    4 NNNNKMNTRKIKINFQGTAGDVDLPSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKET-AAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPRE 792
            NN+N M T  IKINFQG + DV++P+P TLA LQ  IA+ F  E+P RS   EAAKD+DLSFTYKDP+GDDIVFDKDSEL LA+RLCP SLEI+AA KE  AA+ PD E RLY +AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL+ESVAAGMELMS+EDDKKEWNDGFVSVEPA  +       D+DN    ++K+D  AP  K+N++HKAFIA GIQLRPRE
Sbjct:   12 NNDNTMTTSSIKINFQGASRDVNVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGK-NNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEPADTSSP-----DNDN----EEKNDAVAPEVKKNLIHKAFIAGGIQLRPRE 267          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 1.160e-100
Identity = 180/274 (65.69%), Postives = 205/274 (74.82%), Query Frame = 1
Query:    1 NNNNNKMNTRK------IKINFQGTAGDVDLPSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETA-AKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEP---APAAPTTAEVVDSDNAAAAKDKDDNTAPKENVLHKAFIAAGIQLRPRE 792
            NNNNN+ N  K      IKINFQG + DV++P+P +LA LQ AIA+ F  E+P RS A EAAKD+DLSFTYKDP+GDDIVFDKDSEL LA+RLCPSSLEI+A  KE+  AKKPDPE RLY +AARNLREYNGVPSMT  KLIKTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL+ESVAAGMELMSVEDDKKEWNDGFVS E    A A P TA+    DN    ++ D     K++++HKAFI  GIQLRPRE
Sbjct:    7 NNNNNRYNNDKTMTTPSIKINFQGASRDVNVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGK-NNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPRE 279          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 1.440e-98
Identity = 176/266 (66.17%), Postives = 200/266 (75.19%), Query Frame = 1
Query:    4 NNNNKMNTRKIKINFQGTAGDVDLPSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKET-AAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPRE 792
            NN+  M T  IKINFQG + DV +P+P TLA LQ AIA+ F  E+P RS   EAAKD+DLSFTYKDP+GDDIVFDKDSEL+LALRLCP SLEI+AA KE  A K PD E  LY +AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQ LAPK LL RM A   N  +     LG  K NNEDL+E VAAGME MSVEDDKKEWNDGFVSVEPA       E   SDN    ++++D+ AP  K+N++HKAFIA GIQLRPRE
Sbjct:   23 NNDKTMTTSSIKINFQGASRDVSVPAPATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGK-NNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPA-------ETSSSDNGN--EEENDDAAPEVKQNLIHKAFIAGGIQLRPRE 278          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 4.380e-95
Identity = 173/264 (65.53%), Postives = 200/264 (75.76%), Query Frame = 1
Query:   19 MNTRKIKINFQGTAGDVDLPSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETAA-KKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEP---APAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPRE 792
            M T  IKINFQGT+ +V++ +PFTLA LQ  IA+ F  E+P RS A EA KD+DLSFTYKDP+GDDIVFDKDSEL+LA+RLCP SLEI+AA KE     KPDPE RLY +AARNLREYNGVPSMT  KLIKTLAFL+LNPRRLVKQ LAPK LL RM A   N  +     LG D  NNEDL+ESVAAGMELMSVEDDKKE N+GFVS +P   A A P TA+    DN    ++++D+ AP  K+N++H AFIA GIQLRPRE
Sbjct:    1 MTTSSIKINFQGTSRNVNVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLG-DGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDN--EEENDDAAPEVKKNLIHTAFIAGGIQLRPRE 261          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 6.400e-95
Identity = 171/261 (65.52%), Postives = 196/261 (75.10%), Query Frame = 1
Query:   19 MNTRKIKINFQGTAGDVDLPSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKET-AAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPRE 792
            M T  IKI FQG + DV++  P  LA LQ AIA+ F  E+PARS A EAA D+DLSFTYKDP+GDDIVFDK+SEL LALRLCP SLEI+AA KE  A + PD E +LY +AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL+ESVAAGMELMSVED KKEWNDGFVSVEPA  +        +DN    ++K+D  AP  K+N++HKAFIA GIQLRPRE
Sbjct:   19 MTTSSIKITFQGASRDVNVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGK-NNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEPAEISFPA-----NDN----EEKND-AAPEAKKNLIHKAFIAGGIQLRPRE 268          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.090e-9
Identity = 57/166 (34.34%), Postives = 73/166 (43.98%), Query Frame = 1
Query:  295 KETAAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAPKENVLHKAFIAAGIQLRPRE 792
            K +  +  +P   LY  AARNL EY+GVPSMT   L KT+  LQL P RLV Q LAPK LL   +AA     +A                E      +   V DD    +     +E              D+ A     D  T   ++ +H  F+AAG+QLRPRE
Sbjct:   38 KPSCKRAVEPNPLLYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAA----GDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNTNSRDGTDIE-------------HDHVATQDSIDIETGASKHPIHAVFVAAGVQLRPRE 186          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 5.530e-7
Identity = 53/166 (31.93%), Postives = 75/166 (45.18%), Query Frame = 1
Query:  295 KETAAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAPKENVLHKAFIAAGIQLRPRE 792
            K +  +  +P   ++  AARNLREY+GVPS+TP  L  T+  L+L P RLV Q LAPK LL   + A  + D       GG ++  E  +   +  +   S  D     ND  V+                  A A+K          + +   F+A G+QLRPRE
Sbjct:   28 KPSCKRTGEPNPLMFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGS--GGFEAEEEQANNQFSHDLSSNS-SDGGDTGNDNIVTQNSI-----------GFEARASK----------HPIQAVFVAVGVQLRPRE 169          
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 6.220e-7
Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 1
Query:  334 LYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKAL 474
            LY  AARNLREY+GVPSMT   L KT+  LQL P RLV Q LAPK +
Sbjct:   53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LN82_ECTSI4.000e-10568.03PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN68_ECTSI8.770e-10368.58PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN66_ECTSI2.140e-10266.92PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ17_9PHAE1.160e-10065.69PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE1.440e-9866.17PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE4.380e-9565.53PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE6.400e-9565.52PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K3J2_9PHAE1.090e-934.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG1_9PHAE5.530e-731.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI70_9PHAE6.220e-765.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:196569..198036 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size792
Cds size774
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.730.1prot_C-linearis_contig101.730.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig101 196569..198018 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927362.2996724-CDS-C-linearis_contig101:196568..1970571622927362.2996724-CDS-C-linearis_contig101:196568..197057Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 196569..197057 -
1690879653.4263983-CDS-C-linearis_contig101:196568..1970571690879653.4263983-CDS-C-linearis_contig101:196568..197057Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 196569..197057 -
1622927362.3189838-CDS-C-linearis_contig101:197733..1980181622927362.3189838-CDS-C-linearis_contig101:197733..198018Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 197734..198018 -
1690879653.4361324-CDS-C-linearis_contig101:197733..1980181690879653.4361324-CDS-C-linearis_contig101:197733..198018Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 197734..198018 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927362.3306892-UTR-C-linearis_contig101:198018..1980361622927362.3306892-UTR-C-linearis_contig101:198018..198036Chordaria linearis ClinC8C monoicousUTRC-linearis_contig101 198019..198036 -
1690879653.445099-UTR-C-linearis_contig101:198018..1980361690879653.445099-UTR-C-linearis_contig101:198018..198036Chordaria linearis ClinC8C monoicousUTRC-linearis_contig101 198019..198036 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig101.730.1

>prot_C-linearis_contig101.730.1 ID=prot_C-linearis_contig101.730.1|Name=mRNA_C-linearis_contig101.730.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=258bp
MNTRKIKINFQGTAGDVDLPSPFTLAGLQQAIASTFGTEMPARSGADEAA
KDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETAAKKP
DPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPK
ALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKE
WNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAPKENVLHKAFIAA
GIQLRPRE
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mRNA from alignment at C-linearis_contig101:196569..198036-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.730.1 ID=mRNA_C-linearis_contig101.730.1|Name=mRNA_C-linearis_contig101.730.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1468bp|location=Sequence derived from alignment at C-linearis_contig101:196569..198036- (Chordaria linearis ClinC8C monoicous)
AACAACAACAACAACAAGATGAACACTCGCAAAATCAAGATCAACTTCCA GGGCACCGCTGGCGACGTCGACCTTCCGTCCCCGTTCACGCTCGCCGGCC TCCAGCAAGCCATCGCTTCAACCTTCGGCACCGAGATGCCCGCTCGCTCC GGCGCTGATGAGGCCGCCAAGGACAGCGACCTGTCCTTCACCTACAAGGA CCCTGAGGGCGACGACATCGTGTTCGACAAGGACTCCGAGCTGAGCCTGG CGCTTCGCCTGTGCCCCAGCTCGCTCGAGATCACCGCGGCCGCCAAGGAA ACGGTGAGAGACGCTACAAGTACTCGAAACTCGTGGAGTACACTGGTACT AGATTTGCGGTAGCTTGTGAGTTGGTTGCAGCGTGAGCGCGTGAGCTCGG TACGTTTGTAGAGAGAGTTGGATCAAAGTAGGCCATGATCGCTGTAAGCC CGTCTTCACTCTGTCTTTCGAGGCCTGTACTTGGTGCGCCCGACTGCTGT GCACGTACTTTTTTATTTTAATTTGTGTAACACCCGCAACGCGATTCCGG CGCTGCTCGTTGGGAACTCGTCTTCGGATGACCCCTCACGCACAGACGAA ATAAGAAATAAATCGGTAGACGAGAGTCGGTCTCGTGTCATATACCTGGT ATCATATTTCTTCAAATCGATTGGAGTCTGTGTAGTCACCAAGCTATCAT CGCGTTGATTCAGTGGCGATTTTCCTCTTCTCGAAGCTTTGGGAACTGCT GTGCTTGTTCGCTGTGCTTGTTCATCCTCTCTCCCCGTCACCGACGAAAG GAGTCGGTACAAGAGTTCGACATCACCAGTACCGTATGTCTGTATCTATC GGCGAAGTTGTGTTACCCCACACCGCTGTAGAGTCTAAACAATCAGTACT TGTACGTGTATTTGACGTTCCTCGTCCTCCCTCCCTCCCGCTCATTCTTT TCCCCTCTCCCTCTCTTCAACCCTTGCAGGCGGCCAAGAAGCCCGACCCC GAACACCGGCTGTACACCGTCGCCGCCCGCAACCTCCGCGAGTACAACGG CGTGCCCTCCATGACCCCGAAGAAGCTCATCAAGACCCTGGCGTTCCTCC AGCTCAACCCGCGCCGCCTCGTCAAGCAGAGCCTGGCCCCCAAGGCGCTG CTGATCCGCATGGCCGCCGCCAAGAAGAACGAGGACGAGGCGCAGCCCCA GCCCCTCGGCGGTGACAAGAGCAACAACGAAGATCTCTCCGAGTCGGTCG CCGCTGGCATGGAGCTGATGAGCGTCGAGGACGACAAGAAGGAGTGGAAC GACGGTTTCGTATCCGTCGAACCCGCACCCGCCGCCCCTACTACAGCGGA AGTGGTCGACTCCGACAACGCCGCTGCCGCGAAGGACAAGGACGACAATA CCGCGCCCAAGGAGAACGTACTCCACAAGGCCTTCATCGCCGCCGGCATC CAGCTCCGCCCCCGCGAG
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Coding sequence (CDS) from alignment at C-linearis_contig101:196569..198036-

>mRNA_C-linearis_contig101.730.1 ID=mRNA_C-linearis_contig101.730.1|Name=mRNA_C-linearis_contig101.730.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at C-linearis_contig101:196569..198036- (Chordaria linearis ClinC8C monoicous)
ATGAACACTCGCAAAATCAAGATCAACTTCCAGGGCACCGCTGGCGACGT
CGACCTTCCGTCCCCGTTCACGCTCGCCGGCCTCCAGCAAGCCATCGCTT
CAACCTTCGGCACCGAGATGCCCGCTCGCTCCGGCGCTGATGAGGCCGCC
AAGGACAGCGACCTGTCCTTCACCTACAAGGACCCTGAGGGCGACGACAT
CGTGTTCGACAAGGACTCCGAGCTGAGCCTGGCGCTTCGCCTGTGCCCCA
GCTCGCTCGAGATCACCGCGGCCGCCAAGGAAACGATGAACACTCGCAAA
ATCAAGATCAACTTCCAGGGCACCGCTGGCGACGTCGACCTTCCGTCCCC
GTTCACGCTCGCCGGCCTCCAGCAAGCCATCGCTTCAACCTTCGGCACCG
AGATGCCCGCTCGCTCCGGCGCTGATGAGGCCGCCAAGGACAGCGACCTG
TCCTTCACCTACAAGGACCCTGAGGGCGACGACATCGTGTTCGACAAGGA
CTCCGAGCTGAGCCTGGCGCTTCGCCTGTGCCCCAGCTCGCTCGAGATCA
CCGCGGCCGCCAAGGAAACGGCGGCCAAGAAGCCCGACCCCGAACACCGG
CTGTACACCGTCGCCGCCCGCAACCTCCGCGAGTACAACGGCGTGCCCTC
CATGACCCCGAAGAAGCTCATCAAGACCCTGGCGTTCCTCCAGCTCAACC
CGCGCCGCCTCGTCAAGCAGAGCCTGGCCCCCAAGGCGCTGCTGATCCGC
ATGGCCGCCGCCAAGAAGAACGAGGACGAGGCGCAGCCCCAGCCCCTCGG
CGGTGACAAGAGCAACAACGAAGATCTCTCCGAGTCGGTCGCCGCTGGCA
TGGAGCTGATGAGCGTCGAGGACGACAAGAAGGAGTGGAACGACGGTTTC
GTATCCGTCGAACCCGCACCCGCCGCCCCTACTACAGCGGAAGTGGTCGA
CTCCGACAACGCCGCTGCCGCGAAGGACAAGGACGACAATACCGCGCCCA
AGGAGAACGTACTCCACAAGGCCTTCATCGCCGCCGGCATCCAGCTCCGC
CCCCGCGAGGCGGCCAAGAAGCCCGACCCCGAACACCGGCTGTACACCGT
CGCCGCCCGCAACCTCCGCGAGTACAACGGCGTGCCCTCCATGACCCCGA
AGAAGCTCATCAAGACCCTGGCGTTCCTCCAGCTCAACCCGCGCCGCCTC
GTCAAGCAGAGCCTGGCCCCCAAGGCGCTGCTGATCCGCATGGCCGCCGC
CAAGAAGAACGAGGACGAGGCGCAGCCCCAGCCCCTCGGCGGTGACAAGA
GCAACAACGAAGATCTCTCCGAGTCGGTCGCCGCTGGCATGGAGCTGATG
AGCGTCGAGGACGACAAGAAGGAGTGGAACGACGGTTTCGTATCCGTCGA
ACCCGCACCCGCCGCCCCTACTACAGCGGAAGTGGTCGACTCCGACAACG
CCGCTGCCGCGAAGGACAAGGACGACAATACCGCGCCCAAGGAGAACGTA
CTCCACAAGGCCTTCATCGCCGCCGGCATCCAGCTCCGCCCCCGCGAG
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